RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SETXQ7Z333 2677 aaKnown RBP9.41□□□□□ -0.9
CIITA-213ENST00000618327 A0A087WSZ3 146 aa9.41□□□□□ -0.9
CIITA-213ENST00000618327 DNAH10OSP0CZ25 163 aa9.41□□□□□ -0.9
CIITA-213ENST00000618327 H0Y9P7 68 aa9.39□□□□□ -0.91
CIITA-213ENST00000618327 PRO0461Q9UI25 63 aa9.39□□□□□ -0.91
CIITA-213ENST00000618327 TM2D3Q9BRN9 247 aa9.39□□□□□ -0.91
CIITA-213ENST00000618327 CXCL6P80162 114 aa9.38□□□□□ -0.91
CIITA-213ENST00000618327 NBDYA0A0U1RRE5 68 aa9.37□□□□□ -0.91
CIITA-213ENST00000618327 C22orf24Q9Y442 160 aa9.37□□□□□ -0.91
CIITA-213ENST00000618327 ITPR2Q14571 2701 aa9.37□□□□□ -0.91
CIITA-213ENST00000618327 RPS28P62857 69 aaKnown RBP9.37□□□□□ -0.91
CIITA-213ENST00000618327 IGHV6-1A0A0B4J1U7 121 aa9.37□□□□□ -0.91
CIITA-213ENST00000618327 hDV103S1A0JD37 113 aa9.37□□□□□ -0.91
CIITA-213ENST00000618327 ITPR1Q14643 2758 aa9.37□□□□□ -0.91
CIITA-213ENST00000618327 LITAFQ99732 161 aa9.36□□□□□ -0.91
CIITA-213ENST00000618327 UTP20O75691 2785 aaKnown RBP9.36□□□□□ -0.91
CIITA-213ENST00000618327 WIPF1O43516 503 aa9.35□□□□□ -0.91
CIITA-213ENST00000618327 DEFB116Q30KQ4 102 aa9.35□□□□□ -0.91
CIITA-213ENST00000618327 UBR5O95071 2799 aaPredicted RBP9.35□□□□□ -0.91
CIITA-213ENST00000618327 HCG22E2RYF7 251 aa9.35□□□□□ -0.91
CIITA-213ENST00000618327 PRR34Q9NV39 138 aa9.35□□□□□ -0.91
CIITA-213ENST00000618327 TACC2O95359 2948 aa9.34□□□□□ -0.91
CIITA-213ENST00000618327 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
CIITA-213ENST00000618327 Q9BRP9 147 aa9.33□□□□□ -0.92
CIITA-213ENST00000618327 LIMD2Q9BT23 127 aa9.32□□□□□ -0.92
CIITA-213ENST00000618327 NOTCH1P46531 2555 aa9.32□□□□□ -0.92
CIITA-213ENST00000618327 MUC3AQ02505 3323 aa9.32□□□□□ -0.92
CIITA-213ENST00000618327 C4orf26Q17RF5 130 aa9.31□□□□□ -0.92
CIITA-213ENST00000618327 BCE1O60756 84 aa9.31□□□□□ -0.92
CIITA-213ENST00000618327 LINC00167Q96N53 147 aa9.31□□□□□ -0.92
CIITA-213ENST00000618327 WWC2-AS2Q96NR7 200 aa9.3□□□□□ -0.92
CIITA-213ENST00000618327 C1orf64Q8NEQ6 169 aa9.29□□□□□ -0.92
CIITA-213ENST00000618327 CIRBP-AS1Q8TBR5 109 aa9.29□□□□□ -0.92
CIITA-213ENST00000618327 PRLHP81277 87 aa9.29□□□□□ -0.92
CIITA-213ENST00000618327 SPINK1P00995 79 aa9.28□□□□□ -0.92
CIITA-213ENST00000618327 SMIM29Q86T20 159 aa9.28□□□□□ -0.92
CIITA-213ENST00000618327 APCP25054 2843 aa9.27□□□□□ -0.93
CIITA-213ENST00000618327 KIAA0087Q14695 138 aa9.27□□□□□ -0.93
CIITA-213ENST00000618327 Q6ZRP5 223 aa9.26□□□□□ -0.93
CIITA-213ENST00000618327 FAM218AQ96MZ4 157 aa9.26□□□□□ -0.93
CIITA-213ENST00000618327 CFAP47Q6ZTR5 3102 aa9.25□□□□□ -0.93
CIITA-213ENST00000618327 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
CIITA-213ENST00000618327 C16orf90A8MZG2 172 aa9.24□□□□□ -0.93
CIITA-213ENST00000618327 SMCR5Q8TEV8 140 aa9.23□□□□□ -0.93
CIITA-213ENST00000618327 RETNLBQ9BQ08 111 aa9.23□□□□□ -0.93
CIITA-213ENST00000618327 C15orf56Q8N910 161 aa9.23□□□□□ -0.93
CIITA-213ENST00000618327 ELOF1P60002 83 aaKnown RBP9.22□□□□□ -0.93
CIITA-213ENST00000618327 VPREB1P12018 145 aa9.22□□□□□ -0.93
CIITA-213ENST00000618327 RTL8CO15255 209 aa9.21□□□□□ -0.93
CIITA-213ENST00000618327 HIVEP1P15822 2718 aa9.2□□□□□ -0.94
CIITA-213ENST00000618327 ZANQ9Y493 2812 aa9.19□□□□□ -0.94
CIITA-213ENST00000618327 PHF5AQ7RTV0 110 aaKnown RBP9.19□□□□□ -0.94
CIITA-213ENST00000618327 HRNRQ86YZ3 2850 aaPredicted RBP9.19□□□□□ -0.94
CIITA-213ENST00000618327 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
CIITA-213ENST00000618327 IGLV6-57P01721 117 aa9.18□□□□□ -0.94
CIITA-213ENST00000618327 APLNQ9ULZ1 77 aa9.18□□□□□ -0.94
CIITA-213ENST00000618327 Q6ZQT0 140 aa9.17□□□□□ -0.94
CIITA-213ENST00000618327 Q6ZRX8 168 aa9.17□□□□□ -0.94
CIITA-213ENST00000618327 NBEAL2Q6ZNJ1 2754 aa9.17□□□□□ -0.94
CIITA-213ENST00000618327 A0A1B0GU69 56 aa9.17□□□□□ -0.94
CIITA-213ENST00000618327 A0A1B0GW54 56 aa9.17□□□□□ -0.94
CIITA-213ENST00000618327 DMDP11532 3685 aa9.16□□□□□ -0.94
CIITA-213ENST00000618327 FAM168BA1KXE4 195 aa9.16□□□□□ -0.94
CIITA-213ENST00000618327 FAM104AQ969W3 186 aa9.16□□□□□ -0.94
CIITA-213ENST00000618327 SPAG11AQ6PDA7 123 aa9.15□□□□□ -0.94
CIITA-213ENST00000618327 SERTAD4-AS1Q5TG53 156 aa9.15□□□□□ -0.94
CIITA-213ENST00000618327 TP53AIP1Q9HCN2 124 aa9.15□□□□□ -0.94
CIITA-213ENST00000618327 IGKV2D-30A0A075B6S6 120 aa9.14□□□□□ -0.95
CIITA-213ENST00000618327 IGKV2-30P06310 120 aa9.14□□□□□ -0.95
CIITA-213ENST00000618327 LOC110117498A0A087WWA1 95 aa9.13□□□□□ -0.95
CIITA-213ENST00000618327 Q8NBF4 154 aa9.13□□□□□ -0.95
CIITA-213ENST00000618327 NSD1Q96L73 2696 aaPredicted RBP9.13□□□□□ -0.95
CIITA-213ENST00000618327 H3BPC8 53 aa9.11□□□□□ -0.95
CIITA-213ENST00000618327 ACYP2P14621 99 aa9.11□□□□□ -0.95
CIITA-213ENST00000618327 CASC10Q5T4H9 136 aa9.11□□□□□ -0.95
CIITA-213ENST00000618327 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
CIITA-213ENST00000618327 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.95
CIITA-213ENST00000618327 C9orf129Q5T035 196 aaKnown RBP9.09□□□□□ -0.95
CIITA-213ENST00000618327 KCNQ1DNQ9H478 68 aa9.09□□□□□ -0.95
CIITA-213ENST00000618327 IGLV1-50A0A075B6I6 118 aa9.09□□□□□ -0.95
CIITA-213ENST00000618327 ATP11AUNQ6ZP68 121 aa9.09□□□□□ -0.95
CIITA-213ENST00000618327 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
CIITA-213ENST00000618327 ST20-AS1Q8NBB2 130 aa9.08□□□□□ -0.96
CIITA-213ENST00000618327 A0A087WTM6 91 aa9.07□□□□□ -0.96
CIITA-213ENST00000618327 CRYBG3Q68DQ2 2970 aa9.07□□□□□ -0.96
CIITA-213ENST00000618327 LAMA5O15230 3695 aa9.07□□□□□ -0.96
CIITA-213ENST00000618327 C9orf163Q8N9P6 203 aa9.07□□□□□ -0.96
CIITA-213ENST00000618327 LINC00476Q8WZB0 136 aa9.05□□□□□ -0.96
CIITA-213ENST00000618327 CELSR2Q9HCU4 2923 aa9.05□□□□□ -0.96
CIITA-213ENST00000618327 C8orf87E5RJ46 101 aa9.05□□□□□ -0.96
CIITA-213ENST00000618327 C7orf65Q6ZTY9 151 aa9.05□□□□□ -0.96
CIITA-213ENST00000618327 LINC00528Q8N1L1 170 aa9.05□□□□□ -0.96
CIITA-213ENST00000618327 RELNP78509 3460 aa9.04□□□□□ -0.96
CIITA-213ENST00000618327 WDFY3Q8IZQ1 3526 aa9.04□□□□□ -0.96
CIITA-213ENST00000618327 A8MUN3 132 aa9.03□□□□□ -0.96
CIITA-213ENST00000618327 MOBPQ13875 183 aa9.02□□□□□ -0.96
CIITA-213ENST00000618327 CNBPP62633 177 aaKnown RBP9.02□□□□□ -0.97
CIITA-213ENST00000618327 PLA2G2DQ9UNK4 145 aa9.02□□□□□ -0.97
CIITA-213ENST00000618327 DCHS1Q96JQ0 3298 aa9.02□□□□□ -0.97
CIITA-213ENST00000618327 TRBV7-4A0A0J9YYF1 115 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms