RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 COX6CP09669 75 aa7.39□□□□□ -1.23
PDPN-211ENST00000617617 Q1RN00 199 aa7.39□□□□□ -1.23
PDPN-211ENST00000617617 FAM19A5Q7Z5A7 132 aaPredicted RBP7.39□□□□□ -1.23
PDPN-211ENST00000617617 LINC01620Q4KN68 170 aa7.38□□□□□ -1.23
PDPN-211ENST00000617617 A0A1B0GX51 115 aa7.37□□□□□ -1.23
PDPN-211ENST00000617617 KRTAP4-16G5E9R7 235 aaPredicted RBP7.37□□□□□ -1.23
PDPN-211ENST00000617617 PSMB2P49721 201 aa7.37□□□□□ -1.23
PDPN-211ENST00000617617 H7C2G1 150 aa7.37□□□□□ -1.23
PDPN-211ENST00000617617 ZNF73O43830 326 aaPredicted RBP7.36□□□□□ -1.23
PDPN-211ENST00000617617 DYNC1H1Q14204 4646 aaKnown RBP7.36□□□□□ -1.23
PDPN-211ENST00000617617 A0A087WYN8 130 aa7.36□□□□□ -1.23
PDPN-211ENST00000617617 J3QR89 54 aa7.36□□□□□ -1.23
PDPN-211ENST00000617617 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
PDPN-211ENST00000617617 DIRC1Q969H9 104 aa7.36□□□□□ -1.23
PDPN-211ENST00000617617 NAA38Q9BRA0 125 aaKnown RBP7.36□□□□□ -1.23
PDPN-211ENST00000617617 SS18L2Q9UHA2 77 aa7.36□□□□□ -1.23
PDPN-211ENST00000617617 SPCS1Q9Y6A9 102 aa7.36□□□□□ -1.23
PDPN-211ENST00000617617 FUSP35637 526 aaKnown RBP eCLIP7.35□□□□□ -1.23
PDPN-211ENST00000617617 ELOF1P60002 83 aaKnown RBP7.35□□□□□ -1.23
PDPN-211ENST00000617617 RYR3Q15413 4870 aa7.35□□□□□ -1.23
PDPN-211ENST00000617617 LST1O00453 97 aa7.34□□□□□ -1.23
PDPN-211ENST00000617617 LINC01600Q96MT4 127 aa7.34□□□□□ -1.23
PDPN-211ENST00000617617 C6orf99Q4VX62 202 aa7.34□□□□□ -1.23
PDPN-211ENST00000617617 H0Y9J4 135 aa7.33□□□□□ -1.24
PDPN-211ENST00000617617 TRACP01848 142 aa7.33□□□□□ -1.24
PDPN-211ENST00000617617 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
PDPN-211ENST00000617617 TCL1BO95988 128 aa7.33□□□□□ -1.24
PDPN-211ENST00000617617 SCGB1C2P0DMR2 95 aa7.33□□□□□ -1.24
PDPN-211ENST00000617617 INAFM2P0DMQ5 153 aa7.33□□□□□ -1.24
PDPN-211ENST00000617617 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
PDPN-211ENST00000617617 PHF5AQ7RTV0 110 aaKnown RBP7.33□□□□□ -1.24
PDPN-211ENST00000617617 LINC00528Q8N1L1 170 aa7.32□□□□□ -1.24
PDPN-211ENST00000617617 B5MCH6 92 aa7.31□□□□□ -1.24
PDPN-211ENST00000617617 COX7BP24311 80 aa7.31□□□□□ -1.24
PDPN-211ENST00000617617 LINC00575Q6W349 94 aa7.31□□□□□ -1.24
PDPN-211ENST00000617617 FAM30AQ9NZY2 134 aa7.31□□□□□ -1.24
PDPN-211ENST00000617617 RPL37AP8A6NKH3 93 aa7.31□□□□□ -1.24
PDPN-211ENST00000617617 PKHD1P08F94 4074 aa7.3□□□□□ -1.24
PDPN-211ENST00000617617 Q6ZRX8 168 aa7.3□□□□□ -1.24
PDPN-211ENST00000617617 FAM218AQ96MZ4 157 aa7.3□□□□□ -1.24
PDPN-211ENST00000617617 LRP1BQ9NZR2 4599 aa7.3□□□□□ -1.24
PDPN-211ENST00000617617 KRTAP11-1Q8IUC1 163 aa7.29□□□□□ -1.24
PDPN-211ENST00000617617 CIRBP-AS1Q8TBR5 109 aa7.29□□□□□ -1.24
PDPN-211ENST00000617617 CLEC2BQ92478 149 aa7.29□□□□□ -1.24
PDPN-211ENST00000617617 H3BQ85 93 aa7.28□□□□□ -1.24
PDPN-211ENST00000617617 DHRS4-AS1Q9P1J3 65 aa7.28□□□□□ -1.24
PDPN-211ENST00000617617 SCXQ7RTU7 201 aa7.28□□□□□ -1.24
PDPN-211ENST00000617617 KRTAP13-1Q8IUC0 172 aa7.28□□□□□ -1.24
PDPN-211ENST00000617617 DPH3Q96FX2 82 aa7.28□□□□□ -1.24
PDPN-211ENST00000617617 BCE1O60756 84 aa7.28□□□□□ -1.24
PDPN-211ENST00000617617 SNCGO76070 127 aa7.28□□□□□ -1.24
PDPN-211ENST00000617617 UBE2BP63146 152 aa7.28□□□□□ -1.24
PDPN-211ENST00000617617 PRO0461Q9UI25 63 aa7.27□□□□□ -1.25
PDPN-211ENST00000617617 ETDCA0A1B0GVM5 59 aa7.27□□□□□ -1.25
PDPN-211ENST00000617617 hADV29S1A0JD25 119 aa7.26□□□□□ -1.25
PDPN-211ENST00000617617 F8W1H4 67 aa7.26□□□□□ -1.25
PDPN-211ENST00000617617 H3BMG7 143 aa7.26□□□□□ -1.25
PDPN-211ENST00000617617 SLC25A20O43772 301 aa7.25□□□□□ -1.25
PDPN-211ENST00000617617 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.25□□□□□ -1.25
PDPN-211ENST00000617617 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
PDPN-211ENST00000617617 APOBP04114 4563 aaKnown RBP7.25□□□□□ -1.25
PDPN-211ENST00000617617 H3BT86 120 aa7.24□□□□□ -1.25
PDPN-211ENST00000617617 PPDPFLQ8WWR9 84 aa7.24□□□□□ -1.25
PDPN-211ENST00000617617 Q9BRP9 147 aa7.24□□□□□ -1.25
PDPN-211ENST00000617617 ETDBQ3ZM63 59 aa7.24□□□□□ -1.25
PDPN-211ENST00000617617 ANAPC13Q9BS18 74 aa7.24□□□□□ -1.25
PDPN-211ENST00000617617 GHRHP01286 108 aa7.23□□□□□ -1.25
PDPN-211ENST00000617617 PSORS1C2Q9UIG4 136 aa7.23□□□□□ -1.25
PDPN-211ENST00000617617 XGP55808 180 aa7.22□□□□□ -1.25
PDPN-211ENST00000617617 SMCR5Q8TEV8 140 aa7.22□□□□□ -1.25
PDPN-211ENST00000617617 DNAL4O96015 105 aa7.22□□□□□ -1.25
PDPN-211ENST00000617617 FAM19A1Q7Z5A9 133 aa7.21□□□□□ -1.25
PDPN-211ENST00000617617 IGLV5-48A0A075B6I7 105 aa7.21□□□□□ -1.26
PDPN-211ENST00000617617 C9JAW5 83 aa7.21□□□□□ -1.26
PDPN-211ENST00000617617 MT-ATP8P03928 68 aa7.21□□□□□ -1.26
PDPN-211ENST00000617617 ORMDL1Q9P0S3 153 aa7.21□□□□□ -1.26
PDPN-211ENST00000617617 PKHD1L1Q86WI1 4243 aa7.21□□□□□ -1.26
PDPN-211ENST00000617617 SMCPP49901 116 aaPredicted RBP7.2□□□□□ -1.26
PDPN-211ENST00000617617 CDIP1Q9H305 208 aa7.2□□□□□ -1.26
PDPN-211ENST00000617617 CDK2AP2O75956 126 aa7.19□□□□□ -1.26
PDPN-211ENST00000617617 ANKRD29Q8N6D5 301 aa7.19□□□□□ -1.26
PDPN-211ENST00000617617 TMEM256-PLSCR3K7ERE1 68 aa7.19□□□□□ -1.26
PDPN-211ENST00000617617 ZNF861PO60384 105 aa7.18□□□□□ -1.26
PDPN-211ENST00000617617 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
PDPN-211ENST00000617617 SPRR1BP22528 89 aa7.18□□□□□ -1.26
PDPN-211ENST00000617617 UBE2AP49459 152 aa7.18□□□□□ -1.26
PDPN-211ENST00000617617 LINC01547P58512 204 aaPredicted RBP7.18□□□□□ -1.26
PDPN-211ENST00000617617 BAALC-AS2P0C853 105 aa7.18□□□□□ -1.26
PDPN-211ENST00000617617 C1orf137Q5JT78 98 aa7.17□□□□□ -1.26
PDPN-211ENST00000617617 Q6ZQY7 126 aa7.17□□□□□ -1.26
PDPN-211ENST00000617617 PRLHP81277 87 aa7.17□□□□□ -1.26
PDPN-211ENST00000617617 OBSCN-AS1Q96MR7 158 aa7.17□□□□□ -1.26
PDPN-211ENST00000617617 ERC2-IT1O76042 136 aa7.16□□□□□ -1.26
PDPN-211ENST00000617617 VPS13BQ7Z7G8 4022 aa7.16□□□□□ -1.26
PDPN-211ENST00000617617 LINC00483Q53H64 154 aa7.14□□□□□ -1.27
PDPN-211ENST00000617617 ZNF706Q9Y5V0 76 aaPredicted RBP7.14□□□□□ -1.27
PDPN-211ENST00000617617 TEN1Q86WV5 123 aa7.14□□□□□ -1.27
PDPN-211ENST00000617617 Q8N377 158 aa7.14□□□□□ -1.27
PDPN-211ENST00000617617 TEX49A0A1B0GTD5 131 aa7.13□□□□□ -1.27
PDPN-211ENST00000617617 KRTAP10-4P60372 401 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms