RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 TIMM17BO60830 172 aa12.78□□□□□ -0.36
ARHGEF1-223ENST00000617585 PPDPFQ9H3Y8 114 aa12.78□□□□□ -0.36
ARHGEF1-223ENST00000617585 TRAV23DV6A0A075B6W5 121 aa12.77□□□□□ -0.37
ARHGEF1-223ENST00000617585 Q8NBF4 154 aa12.77□□□□□ -0.37
ARHGEF1-223ENST00000617585 MUC17Q685J3 4493 aa12.77□□□□□ -0.37
ARHGEF1-223ENST00000617585 IGLV7-46A0A075B6I9 117 aa12.76□□□□□ -0.37
ARHGEF1-223ENST00000617585 C3orf79P0CE67 100 aa12.75□□□□□ -0.37
ARHGEF1-223ENST00000617585 NPC2P61916 151 aa12.75□□□□□ -0.37
ARHGEF1-223ENST00000617585 C4orf48Q5BLP8 95 aa12.75□□□□□ -0.37
ARHGEF1-223ENST00000617585 GAGE2AQ6NT46 116 aa12.75□□□□□ -0.37
ARHGEF1-223ENST00000617585 JOSD1Q15040 202 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF1-223ENST00000617585 LINC00308Q8TCZ7 52 aa12.74□□□□□ -0.37
ARHGEF1-223ENST00000617585 SPANXCQ9NY87 97 aa12.74□□□□□ -0.37
ARHGEF1-223ENST00000617585 ZNF73O43830 326 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF1-223ENST00000617585 SPINK1P00995 79 aa12.73□□□□□ -0.37
ARHGEF1-223ENST00000617585 FP248Q71RG6 208 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF1-223ENST00000617585 SSBP3-AS1Q7Z2R9 100 aa12.73□□□□□ -0.37
ARHGEF1-223ENST00000617585 CBY1Q9Y3M2 126 aa12.73□□□□□ -0.37
ARHGEF1-223ENST00000617585 C5orf52A6NGY3 159 aa12.7□□□□□ -0.38
ARHGEF1-223ENST00000617585 ZNF815PA8K554 130 aa12.7□□□□□ -0.38
ARHGEF1-223ENST00000617585 RPS29P62273 56 aaKnown RBP12.69□□□□□ -0.38
ARHGEF1-223ENST00000617585 CDIP1Q9H305 208 aa12.69□□□□□ -0.38
ARHGEF1-223ENST00000617585 MOBPQ13875 183 aa12.67□□□□□ -0.38
ARHGEF1-223ENST00000617585 TTTY13Q9BZ97 58 aa12.67□□□□□ -0.38
ARHGEF1-223ENST00000617585 IGLV9-49A0A0B4J1Y8 123 aa12.65□□□□□ -0.38
ARHGEF1-223ENST00000617585 HINT1P49773 126 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF1-223ENST00000617585 SPANXDQ9BXN6 97 aa12.65□□□□□ -0.38
ARHGEF1-223ENST00000617585 KRTDAPP60985 99 aa12.64□□□□□ -0.39
ARHGEF1-223ENST00000617585 A0A0U1RQV1 116 aa12.63□□□□□ -0.39
ARHGEF1-223ENST00000617585 LINC00518Q8N0U6 118 aa12.63□□□□□ -0.39
ARHGEF1-223ENST00000617585 SPRR1BP22528 89 aa12.61□□□□□ -0.39
ARHGEF1-223ENST00000617585 ST20-AS1Q8NBB2 130 aa12.61□□□□□ -0.39
ARHGEF1-223ENST00000617585 OR13C6PQ8NH95 151 aa12.61□□□□□ -0.39
ARHGEF1-223ENST00000617585 C20orf202A1L168 122 aa12.6□□□□□ -0.39
ARHGEF1-223ENST00000617585 KRTAP13-3Q3SY46 172 aa12.6□□□□□ -0.39
ARHGEF1-223ENST00000617585 Q8N377 158 aa12.6□□□□□ -0.39
ARHGEF1-223ENST00000617585 AKR1D1P51857 326 aa12.59□□□□□ -0.39
ARHGEF1-223ENST00000617585 ANKRD39Q53RE8 183 aa12.59□□□□□ -0.39
ARHGEF1-223ENST00000617585 DHRS4-AS1Q9P1J3 65 aa12.59□□□□□ -0.39
ARHGEF1-223ENST00000617585 ELOF1P60002 83 aaKnown RBP12.57□□□□□ -0.4
ARHGEF1-223ENST00000617585 IFITM1P13164 125 aa12.56□□□□□ -0.4
ARHGEF1-223ENST00000617585 Q6ZVH6 145 aa12.56□□□□□ -0.4
ARHGEF1-223ENST00000617585 FAT4Q6V0I7 4981 aa12.56□□□□□ -0.4
ARHGEF1-223ENST00000617585 SLC25A20O43772 301 aa12.55□□□□□ -0.4
ARHGEF1-223ENST00000617585 SCGB1D4Q6XE38 83 aa12.55□□□□□ -0.4
ARHGEF1-223ENST00000617585 COPS9Q8WXC6 57 aa12.55□□□□□ -0.4
ARHGEF1-223ENST00000617585 C6orf99Q4VX62 202 aa12.54□□□□□ -0.4
ARHGEF1-223ENST00000617585 TRBV7-6A0A0J9YX20 115 aa12.53□□□□□ -0.4
ARHGEF1-223ENST00000617585 C9orf153Q5TBE3 101 aa12.53□□□□□ -0.4
ARHGEF1-223ENST00000617585 COX7BP24311 80 aa12.52□□□□□ -0.41
ARHGEF1-223ENST00000617585 SLC25A34Q6PIV7 304 aa12.52□□□□□ -0.41
ARHGEF1-223ENST00000617585 SNRPEP62304 92 aaKnown RBP12.51□□□□□ -0.41
ARHGEF1-223ENST00000617585 ATOH7Q8N100 152 aa12.51□□□□□ -0.41
ARHGEF1-223ENST00000617585 PCP2Q8IVA1 136 aa12.5□□□□□ -0.41
ARHGEF1-223ENST00000617585 LCE2AQ5TA79 106 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF1-223ENST00000617585 MUSTN1Q8IVN3 82 aa12.47□□□□□ -0.41
ARHGEF1-223ENST00000617585 ASB16-AS1Q495Z4 193 aa12.46□□□□□ -0.41
ARHGEF1-223ENST00000617585 LAMTOR3Q9UHA4 124 aa12.46□□□□□ -0.41
ARHGEF1-223ENST00000617585 A0A1B0GWB2 263 aa12.45□□□□□ -0.42
ARHGEF1-223ENST00000617585 HIST3H2BBQ8N257 126 aa12.45□□□□□ -0.42
ARHGEF1-223ENST00000617585 HIST1H2BLQ99880 126 aa12.43□□□□□ -0.42
ARHGEF1-223ENST00000617585 TEX49A0A1B0GTD5 131 aa12.42□□□□□ -0.42
ARHGEF1-223ENST00000617585 A6NDN8 102 aa12.41□□□□□ -0.42
ARHGEF1-223ENST00000617585 TAL2Q16559 108 aa12.41□□□□□ -0.42
ARHGEF1-223ENST00000617585 IGLV5-48A0A075B6I7 105 aa12.4□□□□□ -0.42
ARHGEF1-223ENST00000617585 TRAV13-2A0A0B4J235 113 aa12.4□□□□□ -0.42
ARHGEF1-223ENST00000617585 A4D1N5 150 aa12.4□□□□□ -0.42
ARHGEF1-223ENST00000617585 S100A1P23297 94 aa12.39□□□□□ -0.43
ARHGEF1-223ENST00000617585 LINC01547P58512 204 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF1-223ENST00000617585 CD164Q04900 197 aa12.39□□□□□ -0.43
ARHGEF1-223ENST00000617585 LIMD2Q9BT23 127 aa12.39□□□□□ -0.43
ARHGEF1-223ENST00000617585 XP32Q5T750 250 aa12.38□□□□□ -0.43
ARHGEF1-223ENST00000617585 SMIM29Q86T20 159 aa12.38□□□□□ -0.43
ARHGEF1-223ENST00000617585 S100A2P29034 98 aa12.37□□□□□ -0.43
ARHGEF1-223ENST00000617585 SEC61BP60468 96 aaKnown RBP12.37□□□□□ -0.43
ARHGEF1-223ENST00000617585 DEFB105AQ8NG35 78 aa12.36□□□□□ -0.43
ARHGEF1-223ENST00000617585 Q1RN00 199 aa12.35□□□□□ -0.43
ARHGEF1-223ENST00000617585 SMIM11BQ8TCY0 68 aa12.35□□□□□ -0.43
ARHGEF1-223ENST00000617585 PRO1933Q9H354 126 aa12.35□□□□□ -0.43
ARHGEF1-223ENST00000617585 HSBP1L1C9JCN9 74 aa12.32□□□□□ -0.44
ARHGEF1-223ENST00000617585 Q5XG85 94 aa12.32□□□□□ -0.44
ARHGEF1-223ENST00000617585 HRCT1Q6UXD1 115 aa12.32□□□□□ -0.44
ARHGEF1-223ENST00000617585 NHP2Q9NX24 153 aaKnown RBP12.32□□□□□ -0.44
ARHGEF1-223ENST00000617585 KRTAP4-1Q9BYQ7 146 aa12.31□□□□□ -0.44
ARHGEF1-223ENST00000617585 S100A6P06703 90 aa12.29□□□□□ -0.44
ARHGEF1-223ENST00000617585 H7C2G1 150 aa12.27□□□□□ -0.45
ARHGEF1-223ENST00000617585 VAMP3Q15836 100 aa12.25□□□□□ -0.45
ARHGEF1-223ENST00000617585 LINC00575Q6W349 94 aa12.24□□□□□ -0.45
ARHGEF1-223ENST00000617585 COX8AP10176 69 aa12.19□□□□□ -0.46
ARHGEF1-223ENST00000617585 C1orf195Q5TG92 126 aa12.19□□□□□ -0.46
ARHGEF1-223ENST00000617585 A0A0G2JQZ4 141 aa12.18□□□□□ -0.46
ARHGEF1-223ENST00000617585 DLEU1O43261 78 aa12.18□□□□□ -0.46
ARHGEF1-223ENST00000617585 SCGB1D1O95968 90 aa12.18□□□□□ -0.46
ARHGEF1-223ENST00000617585 hADV29S1A0JD25 119 aa12.17□□□□□ -0.46
ARHGEF1-223ENST00000617585 Q6ZQY7 126 aa12.15□□□□□ -0.46
ARHGEF1-223ENST00000617585 KRTAP9-2Q9BYQ4 174 aa12.15□□□□□ -0.46
ARHGEF1-223ENST00000617585 IGLV8-61A0A075B6I0 122 aa12.14□□□□□ -0.47
ARHGEF1-223ENST00000617585 HIST1H4GQ99525 98 aa12.14□□□□□ -0.47
ARHGEF1-223ENST00000617585 C9orf92A6NGG3 77 aa12.13□□□□□ -0.47
ARHGEF1-223ENST00000617585 F8WEM9 126 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms