RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 SYCNQ0VAF6 134 aa10.14□□□□□ -0.79
GPN1-212ENST00000616939 Q8NBF4 154 aa10.14□□□□□ -0.79
GPN1-212ENST00000616939 ZCCHC13Q8WW36 166 aaKnown RBP10.14□□□□□ -0.79
GPN1-212ENST00000616939 ZNF469Q96JG9 3925 aaPredicted RBP10.14□□□□□ -0.79
GPN1-212ENST00000616939 SMIM29Q86T20 159 aa10.14□□□□□ -0.79
GPN1-212ENST00000616939 SPRR4Q96PI1 79 aa10.14□□□□□ -0.79
GPN1-212ENST00000616939 NF1P21359 2839 aa10.13□□□□□ -0.79
GPN1-212ENST00000616939 APCP25054 2843 aa10.13□□□□□ -0.79
GPN1-212ENST00000616939 hDV103S1A0JD37 113 aa10.13□□□□□ -0.79
GPN1-212ENST00000616939 KRTAP4-16G5E9R7 235 aaPredicted RBP10.12□□□□□ -0.79
GPN1-212ENST00000616939 SPRR1AP35321 89 aa10.12□□□□□ -0.79
GPN1-212ENST00000616939 Q6ZRX8 168 aa10.12□□□□□ -0.79
GPN1-212ENST00000616939 CENPEQ02224 2701 aa10.12□□□□□ -0.79
GPN1-212ENST00000616939 GCN1Q92616 2671 aaKnown RBP10.12□□□□□ -0.79
GPN1-212ENST00000616939 BRK1Q8WUW1 75 aa10.11□□□□□ -0.79
GPN1-212ENST00000616939 LINC01556Q5JQF7 62 aa10.1□□□□□ -0.79
GPN1-212ENST00000616939 C1orf137Q5JT78 98 aa10.1□□□□□ -0.79
GPN1-212ENST00000616939 SERTAD4-AS1Q5TG53 156 aa10.1□□□□□ -0.79
GPN1-212ENST00000616939 ETDCA0A1B0GVM5 59 aa10.1□□□□□ -0.79
GPN1-212ENST00000616939 DEFB105AQ8NG35 78 aa10.1□□□□□ -0.79
GPN1-212ENST00000616939 FAM30AQ9NZY2 134 aa10.1□□□□□ -0.79
GPN1-212ENST00000616939 NIPBLQ6KC79 2804 aaeCLIP10.09□□□□□ -0.79
GPN1-212ENST00000616939 SETD2Q9BYW2 2564 aaPredicted RBP10.08□□□□□ -0.8
GPN1-212ENST00000616939 MPLKIPQ8TAP9 179 aa10.08□□□□□ -0.8
GPN1-212ENST00000616939 Q9BRP9 147 aa10.07□□□□□ -0.8
GPN1-212ENST00000616939 DSCR10P59022 87 aa10.07□□□□□ -0.8
GPN1-212ENST00000616939 Q1T7F1 81 aa10.07□□□□□ -0.8
GPN1-212ENST00000616939 CYP4F30PQ9H0H9 118 aa10.07□□□□□ -0.8
GPN1-212ENST00000616939 CCDC168Q8NDH2 2452 aa10.06□□□□□ -0.8
GPN1-212ENST00000616939 IGLV1-50A0A075B6I6 118 aa10.06□□□□□ -0.8
GPN1-212ENST00000616939 PKIGQ9Y2B9 76 aa10.05□□□□□ -0.8
GPN1-212ENST00000616939 IGKV2D-24A0A075B6R9 120 aa10.05□□□□□ -0.8
GPN1-212ENST00000616939 HIVEP2P31629 2446 aa10.04□□□□□ -0.8
GPN1-212ENST00000616939 USP24Q9UPU5 2620 aa10.04□□□□□ -0.8
GPN1-212ENST00000616939 C1orf195Q5TG92 126 aa10.03□□□□□ -0.8
GPN1-212ENST00000616939 C1orf64Q8NEQ6 169 aa10.01□□□□□ -0.81
GPN1-212ENST00000616939 HCG22E2RYF7 251 aa10□□□□□ -0.81
GPN1-212ENST00000616939 K7EQZ3 153 aa10□□□□□ -0.81
GPN1-212ENST00000616939 CUBNO60494 3623 aa10□□□□□ -0.81
GPN1-212ENST00000616939 NBEAL2Q6ZNJ1 2754 aa10□□□□□ -0.81
GPN1-212ENST00000616939 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.99□□□□□ -0.81
GPN1-212ENST00000616939 NDUFB1O75438 58 aa9.99□□□□□ -0.81
GPN1-212ENST00000616939 DNAH10OSP0CZ25 163 aa9.99□□□□□ -0.81
GPN1-212ENST00000616939 PRR15Q8IV56 129 aa9.99□□□□□ -0.81
GPN1-212ENST00000616939 ST20-AS1Q8NBB2 130 aa9.99□□□□□ -0.81
GPN1-212ENST00000616939 MTORP42345 2549 aa9.98□□□□□ -0.81
GPN1-212ENST00000616939 PDZD2O15018 2839 aa9.98□□□□□ -0.81
GPN1-212ENST00000616939 RPL37AP8A6NKH3 93 aa9.96□□□□□ -0.81
GPN1-212ENST00000616939 ACANP16112 2415 aa9.96□□□□□ -0.82
GPN1-212ENST00000616939 KRTAP7-1Q8IUC3 87 aa9.95□□□□□ -0.82
GPN1-212ENST00000616939 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
GPN1-212ENST00000616939 SMR3AQ99954 134 aa9.94□□□□□ -0.82
GPN1-212ENST00000616939 PSCAO43653 123 aa9.93□□□□□ -0.82
GPN1-212ENST00000616939 MRPL55Q7Z7F7 128 aaKnown RBP9.93□□□□□ -0.82
GPN1-212ENST00000616939 LINC00476Q8WZB0 136 aa9.93□□□□□ -0.82
GPN1-212ENST00000616939 V9GYY9 64 aa9.93□□□□□ -0.82
GPN1-212ENST00000616939 FAM168BA1KXE4 195 aa9.93□□□□□ -0.82
GPN1-212ENST00000616939 RETNQ9HD89 108 aa9.92□□□□□ -0.82
GPN1-212ENST00000616939 H3BPC8 53 aa9.91□□□□□ -0.82
GPN1-212ENST00000616939 UBE2BP63146 152 aa9.91□□□□□ -0.82
GPN1-212ENST00000616939 REG3GQ6UW15 175 aa9.91□□□□□ -0.82
GPN1-212ENST00000616939 MP68P56378 58 aa9.9□□□□□ -0.82
GPN1-212ENST00000616939 DEFB131BA0A096LNP1 70 aa9.89□□□□□ -0.83
GPN1-212ENST00000616939 TRAV22A0A0B4J277 110 aa9.89□□□□□ -0.83
GPN1-212ENST00000616939 IGFL1Q6UW32 110 aa9.89□□□□□ -0.83
GPN1-212ENST00000616939 SPANXA2-OT1Q8N9U9 137 aa9.89□□□□□ -0.83
GPN1-212ENST00000616939 KRTAP29-1A8MX34 341 aaPredicted RBP9.86□□□□□ -0.83
GPN1-212ENST00000616939 LINC00588Q9Y4M8 146 aa9.86□□□□□ -0.83
GPN1-212ENST00000616939 HIVEP1P15822 2718 aa9.84□□□□□ -0.83
GPN1-212ENST00000616939 C11orf45Q8TAV5 145 aa9.84□□□□□ -0.83
GPN1-212ENST00000616939 B9D2Q9BPU9 175 aa9.84□□□□□ -0.83
GPN1-212ENST00000616939 LRCOL1A6NCL2 159 aa9.83□□□□□ -0.84
GPN1-212ENST00000616939 INAFM1C9JVW0 142 aa9.82□□□□□ -0.84
GPN1-212ENST00000616939 CASC10Q5T4H9 136 aa9.82□□□□□ -0.84
GPN1-212ENST00000616939 VWFP04275 2813 aa9.82□□□□□ -0.84
GPN1-212ENST00000616939 KRTAP10-11P60412 298 aa9.81□□□□□ -0.84
GPN1-212ENST00000616939 WFDC13Q8IUB5 93 aa9.81□□□□□ -0.84
GPN1-212ENST00000616939 NOTCH2Q04721 2471 aa9.81□□□□□ -0.84
GPN1-212ENST00000616939 A0A087WSZ3 146 aa9.79□□□□□ -0.84
GPN1-212ENST00000616939 SPRR1BP22528 89 aa9.79□□□□□ -0.84
GPN1-212ENST00000616939 LINC00208Q96KT6 92 aa9.79□□□□□ -0.84
GPN1-212ENST00000616939 H0Y9P7 68 aa9.78□□□□□ -0.84
GPN1-212ENST00000616939 PSPHP1O15172 72 aa9.78□□□□□ -0.84
GPN1-212ENST00000616939 PMAIP1Q13794 54 aa9.77□□□□□ -0.84
GPN1-212ENST00000616939 PRR4Q16378 134 aa9.77□□□□□ -0.84
GPN1-212ENST00000616939 J3QKU1 62 aa9.77□□□□□ -0.85
GPN1-212ENST00000616939 SEC61GP60059 68 aa9.77□□□□□ -0.85
GPN1-212ENST00000616939 CASC2Q6XLA1 102 aa9.76□□□□□ -0.85
GPN1-212ENST00000616939 LIMD2Q9BT23 127 aa9.76□□□□□ -0.85
GPN1-212ENST00000616939 DNAH1Q9P2D7 4330 aa9.75□□□□□ -0.85
GPN1-212ENST00000616939 Q5VV11 94 aa9.75□□□□□ -0.85
GPN1-212ENST00000616939 A8MUN3 132 aa9.75□□□□□ -0.85
GPN1-212ENST00000616939 A8MWP4 228 aa9.75□□□□□ -0.85
GPN1-212ENST00000616939 CNBPP62633 177 aaKnown RBP9.75□□□□□ -0.85
GPN1-212ENST00000616939 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
GPN1-212ENST00000616939 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
GPN1-212ENST00000616939 UNC79Q9P2D8 2635 aa9.74□□□□□ -0.85
GPN1-212ENST00000616939 A0A0G2JQZ4 141 aa9.73□□□□□ -0.85
GPN1-212ENST00000616939 A0A1W2PNN7 141 aa9.73□□□□□ -0.85
GPN1-212ENST00000616939 C16orf90A8MZG2 172 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms