RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-223	ENST00000615442		A6NDN8	102 aa		6.38	□□□□□ -1.39
PVT1-223	ENST00000615442	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.38	□□□□□ -1.39
PVT1-223	ENST00000615442	ETDC	A0A1B0GVM5	59 aa		6.37	□□□□□ -1.39
PVT1-223	ENST00000615442	ZNF73	O43830	326 aa	Predicted RBP	6.37	□□□□□ -1.39
PVT1-223	ENST00000615442	CEND1	Q8N111	149 aa		6.37	□□□□□ -1.39
PVT1-223	ENST00000615442	HINT1	P49773	126 aa	Predicted RBP	6.36	□□□□□ -1.39
PVT1-223	ENST00000615442	PRLH	P81277	87 aa		6.36	□□□□□ -1.39
PVT1-223	ENST00000615442	VPS13B	Q7Z7G8	4022 aa		6.35	□□□□□ -1.39
PVT1-223	ENST00000615442		B5MCH6	92 aa		6.35	□□□□□ -1.39
PVT1-223	ENST00000615442	OXT	P01178	125 aa		6.35	□□□□□ -1.39
PVT1-223	ENST00000615442	HSD52	Q0P140	79 aa		6.35	□□□□□ -1.39
PVT1-223	ENST00000615442	C12orf57	Q99622	126 aa		6.35	□□□□□ -1.39
PVT1-223	ENST00000615442	PRO1933	Q9H354	126 aa		6.35	□□□□□ -1.39
PVT1-223	ENST00000615442	TMEM238L	A0A1B0GVL6	79 aa		6.34	□□□□□ -1.39
PVT1-223	ENST00000615442		A6NJY4	79 aa		6.34	□□□□□ -1.39
PVT1-223	ENST00000615442	PCP4L1	A6NKN8	68 aa		6.34	□□□□□ -1.39
PVT1-223	ENST00000615442	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.34	□□□□□ -1.39
PVT1-223	ENST00000615442		Q6ZRX8	168 aa		6.34	□□□□□ -1.39
PVT1-223	ENST00000615442	SRRM2	Q9UQ35	2752 aa	Known RBP	6.34	□□□□□ -1.4
PVT1-223	ENST00000615442	TRBV7-6	A0A0J9YX20	115 aa		6.33	□□□□□ -1.4
PVT1-223	ENST00000615442	CFC1B	P0CG36	223 aa		6.33	□□□□□ -1.4
PVT1-223	ENST00000615442	CFC1	P0CG37	223 aa		6.33	□□□□□ -1.4
PVT1-223	ENST00000615442	C6orf99	Q4VX62	202 aa		6.33	□□□□□ -1.4
PVT1-223	ENST00000615442	LINC01600	Q96MT4	127 aa		6.33	□□□□□ -1.4
PVT1-223	ENST00000615442		A0A0B4J2C4	111 aa		6.32	□□□□□ -1.4
PVT1-223	ENST00000615442	SMIM11B	Q8TCY0	68 aa		6.32	□□□□□ -1.4
PVT1-223	ENST00000615442	RAB37	Q96AX2	223 aa		6.32	□□□□□ -1.4
PVT1-223	ENST00000615442	HIGD2A	Q9BW72	106 aa		6.32	□□□□□ -1.4
PVT1-223	ENST00000615442	ABCA13	Q86UQ4	5058 aa		6.31	□□□□□ -1.4
PVT1-223	ENST00000615442	TSTD3	H0UI37	97 aa		6.31	□□□□□ -1.4
PVT1-223	ENST00000615442	COX7B	P24311	80 aa		6.31	□□□□□ -1.4
PVT1-223	ENST00000615442	RPL13A	P40429	203 aa	Known RBP	6.31	□□□□□ -1.4
PVT1-223	ENST00000615442	FXYD2	P54710	66 aa		6.31	□□□□□ -1.4
PVT1-223	ENST00000615442	SMCR5	Q8TEV8	140 aa		6.31	□□□□□ -1.4
PVT1-223	ENST00000615442		A0A1B0GWB2	263 aa		6.3	□□□□□ -1.4
PVT1-223	ENST00000615442	KRTAP1-4	P0C5Y4	121 aa		6.3	□□□□□ -1.4
PVT1-223	ENST00000615442	ELOF1	P60002	83 aa	Known RBP	6.3	□□□□□ -1.4
PVT1-223	ENST00000615442	VAMP3	Q15836	100 aa		6.3	□□□□□ -1.4
PVT1-223	ENST00000615442		Q9BRP9	147 aa		6.3	□□□□□ -1.4
PVT1-223	ENST00000615442	DHRS4-AS1	Q9P1J3	65 aa		6.3	□□□□□ -1.4
PVT1-223	ENST00000615442	PRO1854	Q9UHT4	67 aa		6.3	□□□□□ -1.4
PVT1-223	ENST00000615442	ZNF706	Q9Y5V0	76 aa	Predicted RBP	6.29	□□□□□ -1.4
PVT1-223	ENST00000615442	BVES-AS1	Q5T3Y7	98 aa		6.28	□□□□□ -1.4
PVT1-223	ENST00000615442	PCLO	Q9Y6V0	5065 aa		6.27	□□□□□ -1.41
PVT1-223	ENST00000615442		J3QL48	77 aa		6.27	□□□□□ -1.41
PVT1-223	ENST00000615442	ERC2-IT1	O76042	136 aa		6.27	□□□□□ -1.41
PVT1-223	ENST00000615442	KRTAP10-8	P60410	259 aa		6.27	□□□□□ -1.41
PVT1-223	ENST00000615442	FAM229B	Q4G0N7	80 aa		6.27	□□□□□ -1.41
PVT1-223	ENST00000615442	SPRR4	Q96PI1	79 aa		6.27	□□□□□ -1.41
PVT1-223	ENST00000615442	NHP2	Q9NX24	153 aa	Known RBP	6.27	□□□□□ -1.41
PVT1-223	ENST00000615442		H7C2G1	150 aa		6.26	□□□□□ -1.41
PVT1-223	ENST00000615442		M0R143	59 aa		6.26	□□□□□ -1.41
PVT1-223	ENST00000615442	MT1HL1	P0DM35	61 aa		6.25	□□□□□ -1.41
PVT1-223	ENST00000615442	CRYGA	P11844	174 aa		6.25	□□□□□ -1.41
PVT1-223	ENST00000615442	PRR26	Q8N8Z3	221 aa		6.25	□□□□□ -1.41
PVT1-223	ENST00000615442	PKHD1L1	Q86WI1	4243 aa		6.24	□□□□□ -1.41
PVT1-223	ENST00000615442	SLC25A20	O43772	301 aa		6.24	□□□□□ -1.41
PVT1-223	ENST00000615442		Q1RN00	199 aa		6.24	□□□□□ -1.41
PVT1-223	ENST00000615442	LINC00483	Q53H64	154 aa		6.24	□□□□□ -1.41
PVT1-223	ENST00000615442	ANAPC11	Q9NYG5	84 aa		6.24	□□□□□ -1.41
PVT1-223	ENST00000615442		H0YGX0	51 aa		6.23	□□□□□ -1.41
PVT1-223	ENST00000615442		K7ERJ3	54 aa		6.23	□□□□□ -1.41
PVT1-223	ENST00000615442	GAGE2A	Q6NT46	116 aa		6.23	□□□□□ -1.41
PVT1-223	ENST00000615442	LINC00575	Q6W349	94 aa		6.23	□□□□□ -1.41
PVT1-223	ENST00000615442		A0A087X002	238 aa		6.22	□□□□□ -1.41
PVT1-223	ENST00000615442	ST20-AS1	Q8NBB2	130 aa		6.22	□□□□□ -1.41
PVT1-223	ENST00000615442	hADV29S1	A0JD25	119 aa		6.21	□□□□□ -1.42
PVT1-223	ENST00000615442	SNCG	O76070	127 aa		6.21	□□□□□ -1.42
PVT1-223	ENST00000615442	SPRR1B	P22528	89 aa		6.21	□□□□□ -1.42
PVT1-223	ENST00000615442	KRTAP13-2	Q52LG2	175 aa		6.2	□□□□□ -1.42
PVT1-223	ENST00000615442	TYMSOS	Q8TAI1	123 aa		6.2	□□□□□ -1.42
PVT1-223	ENST00000615442	IGLV5-48	A0A075B6I7	105 aa		6.19	□□□□□ -1.42
PVT1-223	ENST00000615442	TEX49	A0A1B0GTD5	131 aa		6.19	□□□□□ -1.42
PVT1-223	ENST00000615442	TRIAP1	O43715	76 aa		6.19	□□□□□ -1.42
PVT1-223	ENST00000615442	TSPAN13	O95857	204 aa		6.19	□□□□□ -1.42
PVT1-223	ENST00000615442	COX6C	P09669	75 aa		6.19	□□□□□ -1.42
PVT1-223	ENST00000615442	PSMB2	P49721	201 aa		6.19	□□□□□ -1.42
PVT1-223	ENST00000615442	FLG2	Q5D862	2391 aa	Predicted RBP	6.19	□□□□□ -1.42
PVT1-223	ENST00000615442		A0A1B0GX51	115 aa		6.18	□□□□□ -1.42
PVT1-223	ENST00000615442	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	6.18	□□□□□ -1.42
PVT1-223	ENST00000615442	DEFB105A	Q8NG35	78 aa		6.18	□□□□□ -1.42
PVT1-223	ENST00000615442	MYCBP2	O75592	4640 aa		6.17	□□□□□ -1.42
PVT1-223	ENST00000615442	LINC01547	P58512	204 aa	Predicted RBP	6.17	□□□□□ -1.42
PVT1-223	ENST00000615442	LAMTOR3	Q9UHA4	124 aa		6.17	□□□□□ -1.42
PVT1-223	ENST00000615442		Q6ZQY7	126 aa		6.16	□□□□□ -1.42
PVT1-223	ENST00000615442	SSBP3-AS1	Q7Z2R9	100 aa		6.16	□□□□□ -1.42
PVT1-223	ENST00000615442	C3orf22	Q8N5N4	141 aa		6.16	□□□□□ -1.42
PVT1-223	ENST00000615442	FAM218A	Q96MZ4	157 aa		6.16	□□□□□ -1.42
PVT1-223	ENST00000615442	LRP1	Q07954	4544 aa	Known RBP	6.16	□□□□□ -1.42
PVT1-223	ENST00000615442	FAT3	Q8TDW7	4589 aa		6.15	□□□□□ -1.42
PVT1-223	ENST00000615442	BATF	Q16520	125 aa		6.15	□□□□□ -1.42
PVT1-223	ENST00000615442	OCIAD2	Q56VL3	154 aa		6.15	□□□□□ -1.42
PVT1-223	ENST00000615442		Q8N377	158 aa		6.15	□□□□□ -1.42
PVT1-223	ENST00000615442	PPDPFL	Q8WWR9	84 aa		6.15	□□□□□ -1.42
PVT1-223	ENST00000615442	IGLV9-49	A0A0B4J1Y8	123 aa		6.14	□□□□□ -1.43
PVT1-223	ENST00000615442	GHRH	P01286	108 aa		6.14	□□□□□ -1.43
PVT1-223	ENST00000615442	SCGB1C2	P0DMR2	95 aa		6.14	□□□□□ -1.43
PVT1-223	ENST00000615442	SMIM29	Q86T20	159 aa		6.14	□□□□□ -1.43
PVT1-223	ENST00000615442	MOBP	Q13875	183 aa		6.13	□□□□□ -1.43
PVT1-223	ENST00000615442	CLEC2B	Q92478	149 aa		6.13	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms