RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 LINC00337Q8N6G1 96 aa8.06□□□□□ -1.12
MDC1-209ENST00000613547 PRLHP81277 87 aa8.05□□□□□ -1.12
MDC1-209ENST00000613547 SPRR1AP35321 89 aa8.04□□□□□ -1.12
MDC1-209ENST00000613547 HINT1P49773 126 aaPredicted RBP8.04□□□□□ -1.12
MDC1-209ENST00000613547 KRTAP13-1Q8IUC0 172 aa8.04□□□□□ -1.12
MDC1-209ENST00000613547 HIGD1BQ9P298 99 aa8.04□□□□□ -1.12
MDC1-209ENST00000613547 DMBT1Q9UGM3 2413 aaPredicted RBP8.04□□□□□ -1.12
MDC1-209ENST00000613547 A6NDN8 102 aa8.03□□□□□ -1.12
MDC1-209ENST00000613547 ZNF73O43830 326 aaPredicted RBP8.03□□□□□ -1.12
MDC1-209ENST00000613547 TRAV13-2A0A0B4J235 113 aa8.02□□□□□ -1.13
MDC1-209ENST00000613547 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.13
MDC1-209ENST00000613547 LINC01600Q96MT4 127 aa8.01□□□□□ -1.13
MDC1-209ENST00000613547 MYCBP2O75592 4640 aa8.01□□□□□ -1.13
MDC1-209ENST00000613547 A4D1N5 150 aa8□□□□□ -1.13
MDC1-209ENST00000613547 KRTAP4-16G5E9R7 235 aaPredicted RBP8□□□□□ -1.13
MDC1-209ENST00000613547 B5MCH6 92 aa7.99□□□□□ -1.13
MDC1-209ENST00000613547 SMIM6P0DI80 62 aa7.99□□□□□ -1.13
MDC1-209ENST00000613547 TAL2Q16559 108 aa7.99□□□□□ -1.13
MDC1-209ENST00000613547 C2orf91Q6ZV80 131 aa7.99□□□□□ -1.13
MDC1-209ENST00000613547 Q6ZRX8 168 aa7.98□□□□□ -1.13
MDC1-209ENST00000613547 UQCR10Q9UDW1 63 aa7.98□□□□□ -1.13
MDC1-209ENST00000613547 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
MDC1-209ENST00000613547 PKHD1L1Q86WI1 4243 aa7.97□□□□□ -1.13
MDC1-209ENST00000613547 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
MDC1-209ENST00000613547 A6NJY4 79 aa7.96□□□□□ -1.14
MDC1-209ENST00000613547 KRTAP1-4P0C5Y4 121 aa7.96□□□□□ -1.14
MDC1-209ENST00000613547 COX7BP24311 80 aa7.95□□□□□ -1.14
MDC1-209ENST00000613547 RPL13AP40429 203 aaKnown RBP7.95□□□□□ -1.14
MDC1-209ENST00000613547 C6orf99Q4VX62 202 aa7.95□□□□□ -1.14
MDC1-209ENST00000613547 SMCR5Q8TEV8 140 aa7.95□□□□□ -1.14
MDC1-209ENST00000613547 C12orf57Q99622 126 aa7.95□□□□□ -1.14
MDC1-209ENST00000613547 TRBV7-6A0A0J9YX20 115 aa7.94□□□□□ -1.14
MDC1-209ENST00000613547 HSD52Q0P140 79 aa7.94□□□□□ -1.14
MDC1-209ENST00000613547 MT1HL1P0DM35 61 aa7.93□□□□□ -1.14
MDC1-209ENST00000613547 CRYGAP11844 174 aa7.93□□□□□ -1.14
MDC1-209ENST00000613547 ELOF1P60002 83 aaKnown RBP7.93□□□□□ -1.14
MDC1-209ENST00000613547 CEND1Q8N111 149 aa7.93□□□□□ -1.14
MDC1-209ENST00000613547 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
MDC1-209ENST00000613547 RAB37Q96AX2 223 aa7.93□□□□□ -1.14
MDC1-209ENST00000613547 DHRS4-AS1Q9P1J3 65 aa7.93□□□□□ -1.14
MDC1-209ENST00000613547 A0A1B0GWB2 263 aa7.92□□□□□ -1.14
MDC1-209ENST00000613547 KRTAP10-8P60410 259 aa7.92□□□□□ -1.14
MDC1-209ENST00000613547 FAM229BQ4G0N7 80 aa7.92□□□□□ -1.14
MDC1-209ENST00000613547 SMIM11BQ8TCY0 68 aa7.92□□□□□ -1.14
MDC1-209ENST00000613547 SPRR4Q96PI1 79 aa7.92□□□□□ -1.14
MDC1-209ENST00000613547 Q9BRP9 147 aa7.92□□□□□ -1.14
MDC1-209ENST00000613547 A0A0B4J2C4 111 aa7.91□□□□□ -1.14
MDC1-209ENST00000613547 LOC105371267A0A1B0GV96 52 aa7.91□□□□□ -1.14
MDC1-209ENST00000613547 VAMP3Q15836 100 aa7.91□□□□□ -1.14
MDC1-209ENST00000613547 SMCPP49901 116 aaPredicted RBP7.9□□□□□ -1.14
MDC1-209ENST00000613547 ANAPC11Q9NYG5 84 aa7.9□□□□□ -1.14
MDC1-209ENST00000613547 LRP1Q07954 4544 aaKnown RBP7.9□□□□□ -1.15
MDC1-209ENST00000613547 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
MDC1-209ENST00000613547 CFC1P0CG37 223 aa7.89□□□□□ -1.15
MDC1-209ENST00000613547 PRO1933Q9H354 126 aa7.89□□□□□ -1.15
MDC1-209ENST00000613547 NHP2Q9NX24 153 aaKnown RBP7.89□□□□□ -1.15
MDC1-209ENST00000613547 ERC2-IT1O76042 136 aa7.88□□□□□ -1.15
MDC1-209ENST00000613547 FXYD2P54710 66 aa7.88□□□□□ -1.15
MDC1-209ENST00000613547 A0A087X002 238 aa7.87□□□□□ -1.15
MDC1-209ENST00000613547 H7C2G1 150 aa7.87□□□□□ -1.15
MDC1-209ENST00000613547 SLC25A20O43772 301 aa7.87□□□□□ -1.15
MDC1-209ENST00000613547 GAGE2AQ6NT46 116 aa7.87□□□□□ -1.15
MDC1-209ENST00000613547 TYMSOSQ8TAI1 123 aa7.87□□□□□ -1.15
MDC1-209ENST00000613547 FAT3Q8TDW7 4589 aa7.86□□□□□ -1.15
MDC1-209ENST00000613547 TSTD3H0UI37 97 aa7.86□□□□□ -1.15
MDC1-209ENST00000613547 Q1RN00 199 aa7.86□□□□□ -1.15
MDC1-209ENST00000613547 BVES-AS1Q5T3Y7 98 aa7.86□□□□□ -1.15
MDC1-209ENST00000613547 PRO1854Q9UHT4 67 aa7.86□□□□□ -1.15
MDC1-209ENST00000613547 LINC00483Q53H64 154 aa7.85□□□□□ -1.15
MDC1-209ENST00000613547 ST20-AS1Q8NBB2 130 aa7.83□□□□□ -1.16
MDC1-209ENST00000613547 SNCGO76070 127 aa7.82□□□□□ -1.16
MDC1-209ENST00000613547 KRTAP13-2Q52LG2 175 aa7.82□□□□□ -1.16
MDC1-209ENST00000613547 H0YGX0 51 aa7.81□□□□□ -1.16
MDC1-209ENST00000613547 M0R143 59 aa7.81□□□□□ -1.16
MDC1-209ENST00000613547 LINC00575Q6W349 94 aa7.81□□□□□ -1.16
MDC1-209ENST00000613547 hADV29S1A0JD25 119 aa7.8□□□□□ -1.16
MDC1-209ENST00000613547 CTAG1AP78358 180 aa7.8□□□□□ -1.16
MDC1-209ENST00000613547 C3orf22Q8N5N4 141 aa7.8□□□□□ -1.16
MDC1-209ENST00000613547 TEX49A0A1B0GTD5 131 aa7.79□□□□□ -1.16
MDC1-209ENST00000613547 K7ERJ3 54 aa7.79□□□□□ -1.16
MDC1-209ENST00000613547 SPRR1BP22528 89 aa7.79□□□□□ -1.16
MDC1-209ENST00000613547 DEFB105AQ8NG35 78 aa7.79□□□□□ -1.16
MDC1-209ENST00000613547 IGLV9-49A0A0B4J1Y8 123 aa7.78□□□□□ -1.16
MDC1-209ENST00000613547 PSMB2P49721 201 aa7.78□□□□□ -1.16
MDC1-209ENST00000613547 LINC00304Q8N9R0 145 aa7.78□□□□□ -1.16
MDC1-209ENST00000613547 LAMTOR3Q9UHA4 124 aa7.78□□□□□ -1.16
MDC1-209ENST00000613547 C9orf153Q5TBE3 101 aa7.77□□□□□ -1.17
MDC1-209ENST00000613547 HERC1Q15751 4861 aa7.76□□□□□ -1.17
MDC1-209ENST00000613547 IGLV5-48A0A075B6I7 105 aa7.76□□□□□ -1.17
MDC1-209ENST00000613547 COX6CP09669 75 aa7.76□□□□□ -1.17
MDC1-209ENST00000613547 MOBPQ13875 183 aa7.76□□□□□ -1.17
MDC1-209ENST00000613547 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.76□□□□□ -1.17
MDC1-209ENST00000613547 Q6ZQY7 126 aa7.76□□□□□ -1.17
MDC1-209ENST00000613547 SSBP3-AS1Q7Z2R9 100 aa7.76□□□□□ -1.17
MDC1-209ENST00000613547 TNXBP22105 4242 aa7.76□□□□□ -1.17
MDC1-209ENST00000613547 SPAG11AQ6PDA7 123 aa7.75□□□□□ -1.17
MDC1-209ENST00000613547 Q8NBF4 154 aa7.75□□□□□ -1.17
MDC1-209ENST00000613547 LCE2BO14633 110 aa7.74□□□□□ -1.17
MDC1-209ENST00000613547 TRIAP1O43715 76 aa7.74□□□□□ -1.17
MDC1-209ENST00000613547 TSPAN13O95857 204 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms