RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 TP53AIP1Q9HCN2 124 aa9.11□□□□□ -0.95
GGA3-220ENST00000613421 ITPR3Q14573 2671 aa9.11□□□□□ -0.95
GGA3-220ENST00000613421 CENPEQ02224 2701 aa9.1□□□□□ -0.95
GGA3-220ENST00000613421 K7EIL1 84 aa9.09□□□□□ -0.95
GGA3-220ENST00000613421 C9orf129Q5T035 196 aaKnown RBP9.09□□□□□ -0.95
GGA3-220ENST00000613421 CDH23Q9H251 3354 aa9.07□□□□□ -0.96
GGA3-220ENST00000613421 RPL37AP61513 92 aaKnown RBP9.07□□□□□ -0.96
GGA3-220ENST00000613421 FAM104AQ969W3 186 aa9.07□□□□□ -0.96
GGA3-220ENST00000613421 USP24Q9UPU5 2620 aa9.06□□□□□ -0.96
GGA3-220ENST00000613421 H3BPC8 53 aa9.06□□□□□ -0.96
GGA3-220ENST00000613421 WDFY4Q6ZS81 3184 aa9.05□□□□□ -0.96
GGA3-220ENST00000613421 K7EQZ3 153 aa9.04□□□□□ -0.96
GGA3-220ENST00000613421 TLX1NBP0CAT3 122 aa9.04□□□□□ -0.96
GGA3-220ENST00000613421 TRIOO75962 3097 aa9.03□□□□□ -0.96
GGA3-220ENST00000613421 Q8N377 158 aa9.03□□□□□ -0.96
GGA3-220ENST00000613421 TRAV22A0A0B4J277 110 aa9.03□□□□□ -0.96
GGA3-220ENST00000613421 SPACA4Q8TDM5 124 aa9.02□□□□□ -0.97
GGA3-220ENST00000613421 PLA2G2DQ9UNK4 145 aa9.02□□□□□ -0.97
GGA3-220ENST00000613421 ERC2-IT1O76042 136 aa9.02□□□□□ -0.97
GGA3-220ENST00000613421 XIRP2A4UGR9 3374 aa9.01□□□□□ -0.97
GGA3-220ENST00000613421 IGKV2D-30A0A075B6S6 120 aa9.01□□□□□ -0.97
GGA3-220ENST00000613421 IGKV2-30P06310 120 aa9.01□□□□□ -0.97
GGA3-220ENST00000613421 SPINK1P00995 79 aa9.01□□□□□ -0.97
GGA3-220ENST00000613421 IGFL1Q6UW32 110 aa9.01□□□□□ -0.97
GGA3-220ENST00000613421 A8MWP4 228 aa9□□□□□ -0.97
GGA3-220ENST00000613421 LINC01600Q96MT4 127 aa9□□□□□ -0.97
GGA3-220ENST00000613421 CFAP46Q8IYW2 2715 aa9□□□□□ -0.97
GGA3-220ENST00000613421 ATRQ13535 2644 aa9□□□□□ -0.97
GGA3-220ENST00000613421 MGAM2Q2M2H8 2515 aa8.99□□□□□ -0.97
GGA3-220ENST00000613421 HELZ2Q9BYK8 2649 aaKnown RBP8.98□□□□□ -0.97
GGA3-220ENST00000613421 AKAP13Q12802 2813 aa8.98□□□□□ -0.97
GGA3-220ENST00000613421 VPS13AQ96RL7 3174 aa8.96□□□□□ -0.98
GGA3-220ENST00000613421 CR1P17927 2039 aa8.96□□□□□ -0.98
GGA3-220ENST00000613421 CASC10Q5T4H9 136 aa8.95□□□□□ -0.98
GGA3-220ENST00000613421 OBSCN-AS1Q96MR7 158 aa8.95□□□□□ -0.98
GGA3-220ENST00000613421 KLKP1Q107X0 134 aa8.95□□□□□ -0.98
GGA3-220ENST00000613421 ACYP2P14621 99 aa8.94□□□□□ -0.98
GGA3-220ENST00000613421 LINC00313P59037 77 aa8.94□□□□□ -0.98
GGA3-220ENST00000613421 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
GGA3-220ENST00000613421 C7orf65Q6ZTY9 151 aa8.92□□□□□ -0.98
GGA3-220ENST00000613421 A0A0G2JQZ4 141 aa8.91□□□□□ -0.98
GGA3-220ENST00000613421 A0A1W2PNN7 141 aa8.91□□□□□ -0.98
GGA3-220ENST00000613421 LINC00336Q6ZUF6 198 aa8.91□□□□□ -0.98
GGA3-220ENST00000613421 PRR15Q8IV56 129 aa8.91□□□□□ -0.98
GGA3-220ENST00000613421 TYMSOSQ8TAI1 123 aa8.9□□□□□ -0.98
GGA3-220ENST00000613421 SPAG11AQ6PDA7 123 aa8.9□□□□□ -0.98
GGA3-220ENST00000613421 MRPL34Q9BQ48 92 aaKnown RBP8.89□□□□□ -0.99
GGA3-220ENST00000613421 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
GGA3-220ENST00000613421 WWC2-AS2Q96NR7 200 aa8.89□□□□□ -0.99
GGA3-220ENST00000613421 A0A1W2PNM2 257 aa8.89□□□□□ -0.99
GGA3-220ENST00000613421 MAST4O15021 2626 aa8.88□□□□□ -0.99
GGA3-220ENST00000613421 A0A087WTM6 91 aa8.88□□□□□ -0.99
GGA3-220ENST00000613421 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
GGA3-220ENST00000613421 IGLV5-37A0A075B6J1 123 aa8.87□□□□□ -0.99
GGA3-220ENST00000613421 A0A1B0GU69 56 aa8.87□□□□□ -0.99
GGA3-220ENST00000613421 C8orf87E5RJ46 101 aa8.87□□□□□ -0.99
GGA3-220ENST00000613421 APLNQ9ULZ1 77 aa8.87□□□□□ -0.99
GGA3-220ENST00000613421 SZT2Q5T011 3432 aa8.87□□□□□ -0.99
GGA3-220ENST00000613421 H7BZZ5 65 aa8.87□□□□□ -0.99
GGA3-220ENST00000613421 ZNF861PO60384 105 aa8.86□□□□□ -0.99
GGA3-220ENST00000613421 DSPP15924 2871 aaKnown RBP8.86□□□□□ -0.99
GGA3-220ENST00000613421 IGLV5-48A0A075B6I7 105 aa8.85□□□□□ -0.99
GGA3-220ENST00000613421 C8orf17Q9NRJ1 99 aa8.85□□□□□ -0.99
GGA3-220ENST00000613421 WIPF1O43516 503 aa8.84□□□□□ -0.99
GGA3-220ENST00000613421 FAM229AH3BQW9 127 aa8.83□□□□□ -1
GGA3-220ENST00000613421 LAMA1P25391 3075 aa8.83□□□□□ -1
GGA3-220ENST00000613421 A0A1B0GVX0 72 aa8.81□□□□□ -1
GGA3-220ENST00000613421 FRYQ5TBA9 3013 aa8.8□□□□□ -1
GGA3-220ENST00000613421 COA5Q86WW8 74 aa8.8□□□□□ -1
GGA3-220ENST00000613421 DNAH14Q0VDD8 3507 aa8.8□□□□□ -1
GGA3-220ENST00000613421 PLA2G1BP04054 148 aaKnown RBP8.8□□□□□ -1
GGA3-220ENST00000613421 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
GGA3-220ENST00000613421 Q96NJ1 140 aa8.8□□□□□ -1
GGA3-220ENST00000613421 VCANP13611 3396 aa8.79□□□□□ -1
GGA3-220ENST00000613421 CHD6Q8TD26 2715 aa8.79□□□□□ -1
GGA3-220ENST00000613421 SPRR4Q96PI1 79 aa8.78□□□□□ -1
GGA3-220ENST00000613421 PSORS1C2Q9UIG4 136 aa8.78□□□□□ -1
GGA3-220ENST00000613421 ANAPC11Q9NYG5 84 aa8.77□□□□□ -1
GGA3-220ENST00000613421 MAP1AP78559 2803 aaPredicted RBP8.77□□□□□ -1.01
GGA3-220ENST00000613421 Q8NDZ9 215 aa8.77□□□□□ -1.01
GGA3-220ENST00000613421 DSCR10P59022 87 aa8.77□□□□□ -1.01
GGA3-220ENST00000613421 CELSR3Q9NYQ7 3312 aa8.76□□□□□ -1.01
GGA3-220ENST00000613421 A8MUN3 132 aa8.76□□□□□ -1.01
GGA3-220ENST00000613421 IGLV7-43P04211 117 aa8.75□□□□□ -1.01
GGA3-220ENST00000613421 IGSF10Q6WRI0 2623 aa8.73□□□□□ -1.01
GGA3-220ENST00000613421 OCR1Q9BZK8 76 aa8.71□□□□□ -1.02
GGA3-220ENST00000613421 GCN1Q92616 2671 aaKnown RBP8.71□□□□□ -1.02
GGA3-220ENST00000613421 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
GGA3-220ENST00000613421 ATP11AUNQ6ZP68 121 aa8.68□□□□□ -1.02
GGA3-220ENST00000613421 LINC00304Q8N9R0 145 aa8.67□□□□□ -1.02
GGA3-220ENST00000613421 IGLV8-61A0A075B6I0 122 aa8.66□□□□□ -1.02
GGA3-220ENST00000613421 TEX15Q9BXT5 2789 aa8.65□□□□□ -1.02
GGA3-220ENST00000613421 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.03
GGA3-220ENST00000613421 SPRR1AP35321 89 aa8.65□□□□□ -1.03
GGA3-220ENST00000613421 UNC79Q9P2D8 2635 aa8.64□□□□□ -1.03
GGA3-220ENST00000613421 CD164Q04900 197 aa8.64□□□□□ -1.03
GGA3-220ENST00000613421 Q5XG85 94 aa8.64□□□□□ -1.03
GGA3-220ENST00000613421 NBEAQ8NFP9 2946 aa8.63□□□□□ -1.03
GGA3-220ENST00000613421 CYSTM1Q9H1C7 97 aa8.63□□□□□ -1.03
GGA3-220ENST00000613421 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms