RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 LINC00528Q8N1L1 170 aa13.28□□□□□ -0.28
CTDP1-208ENST00000613122 APLNQ9ULZ1 77 aa13.26□□□□□ -0.29
CTDP1-208ENST00000613122 C9orf129Q5T035 196 aaKnown RBP13.25□□□□□ -0.29
CTDP1-208ENST00000613122 IGFL1Q6UW32 110 aa13.25□□□□□ -0.29
CTDP1-208ENST00000613122 K7EQZ3 153 aa13.24□□□□□ -0.29
CTDP1-208ENST00000613122 DSCR10P59022 87 aa13.24□□□□□ -0.29
CTDP1-208ENST00000613122 TLX1NBP0CAT3 122 aa13.23□□□□□ -0.29
CTDP1-208ENST00000613122 KRTAP1-1Q07627 177 aa13.22□□□□□ -0.29
CTDP1-208ENST00000613122 C9orf92A6NGG3 77 aa13.21□□□□□ -0.3
CTDP1-208ENST00000613122 PLA2G2DQ9UNK4 145 aa13.2□□□□□ -0.3
CTDP1-208ENST00000613122 IGLV8-61A0A075B6I0 122 aa13.19□□□□□ -0.3
CTDP1-208ENST00000613122 IGLV7-43P04211 117 aa13.19□□□□□ -0.3
CTDP1-208ENST00000613122 OBSCN-AS1Q96MR7 158 aa13.19□□□□□ -0.3
CTDP1-208ENST00000613122 ZNF575Q86XF7 245 aa13.17□□□□□ -0.3
CTDP1-208ENST00000613122 C8orf17Q9NRJ1 99 aa13.16□□□□□ -0.3
CTDP1-208ENST00000613122 PSORS1C2Q9UIG4 136 aa13.13□□□□□ -0.31
CTDP1-208ENST00000613122 HECTD1Q9ULT8 2610 aa13.13□□□□□ -0.31
CTDP1-208ENST00000613122 A0A1B0GVX0 72 aa13.13□□□□□ -0.31
CTDP1-208ENST00000613122 A0A1W2PNN7 141 aa13.12□□□□□ -0.31
CTDP1-208ENST00000613122 Q8N377 158 aa13.12□□□□□ -0.31
CTDP1-208ENST00000613122 ANAPC11Q9NYG5 84 aa13.12□□□□□ -0.31
CTDP1-208ENST00000613122 CNBPP62633 177 aaKnown RBP13.12□□□□□ -0.31
CTDP1-208ENST00000613122 CASC10Q5T4H9 136 aa13.11□□□□□ -0.31
CTDP1-208ENST00000613122 PRR15Q8IV56 129 aa13.11□□□□□ -0.31
CTDP1-208ENST00000613122 EIF4EBP3O60516 100 aaPredicted RBP13.09□□□□□ -0.31
CTDP1-208ENST00000613122 SPRR4Q96PI1 79 aa13.05□□□□□ -0.32
CTDP1-208ENST00000613122 A0A0G2JQZ4 141 aa13.05□□□□□ -0.32
CTDP1-208ENST00000613122 LINC01600Q96MT4 127 aa13.03□□□□□ -0.32
CTDP1-208ENST00000613122 ERC2-IT1O76042 136 aa13.02□□□□□ -0.32
CTDP1-208ENST00000613122 COA5Q86WW8 74 aa13.02□□□□□ -0.33
CTDP1-208ENST00000613122 RBM12B-AS1Q9P1G2 102 aa13.02□□□□□ -0.33
CTDP1-208ENST00000613122 IGLV5-37A0A075B6J1 123 aa13.01□□□□□ -0.33
CTDP1-208ENST00000613122 GOLGB1Q14789 3259 aaKnown RBP12.98□□□□□ -0.33
CTDP1-208ENST00000613122 RPS28P62857 69 aaKnown RBP12.96□□□□□ -0.33
CTDP1-208ENST00000613122 TNP2Q05952 138 aa12.96□□□□□ -0.33
CTDP1-208ENST00000613122 PRO0628Q9UI54 55 aa12.96□□□□□ -0.33
CTDP1-208ENST00000613122 MGAM2Q2M2H8 2515 aa12.94□□□□□ -0.34
CTDP1-208ENST00000613122 C4orf26Q17RF5 130 aa12.91□□□□□ -0.34
CTDP1-208ENST00000613122 UQCR11O14957 56 aa12.9□□□□□ -0.34
CTDP1-208ENST00000613122 USP24Q9UPU5 2620 aa12.87□□□□□ -0.35
CTDP1-208ENST00000613122 A0A1W2PNM2 257 aa12.83□□□□□ -0.36
CTDP1-208ENST00000613122 SPINT4Q6UDR6 99 aa12.82□□□□□ -0.36
CTDP1-208ENST00000613122 CYP4F30PQ9H0H9 118 aa12.8□□□□□ -0.36
CTDP1-208ENST00000613122 A8MUN3 132 aa12.8□□□□□ -0.36
CTDP1-208ENST00000613122 WIPF1O43516 503 aa12.77□□□□□ -0.36
CTDP1-208ENST00000613122 Q6ZSA8 131 aa12.77□□□□□ -0.37
CTDP1-208ENST00000613122 MIR22HGQ0VDD5 57 aa12.76□□□□□ -0.37
CTDP1-208ENST00000613122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.76□□□□□ -0.37
CTDP1-208ENST00000613122 IGLV7-46A0A075B6I9 117 aa12.75□□□□□ -0.37
CTDP1-208ENST00000613122 CD164Q04900 197 aa12.75□□□□□ -0.37
CTDP1-208ENST00000613122 CRIPTQ9P021 101 aa12.75□□□□□ -0.37
CTDP1-208ENST00000613122 IGLV5-48A0A075B6I7 105 aa12.74□□□□□ -0.37
CTDP1-208ENST00000613122 Q8N1X5 172 aa12.74□□□□□ -0.37
CTDP1-208ENST00000613122 LINC01554Q52M75 96 aa12.73□□□□□ -0.37
CTDP1-208ENST00000613122 PRR26Q8N8Z3 221 aa12.73□□□□□ -0.37
CTDP1-208ENST00000613122 KLKP1Q107X0 134 aa12.73□□□□□ -0.37
CTDP1-208ENST00000613122 FLNAP21333 2647 aaKnown RBP12.7□□□□□ -0.38
CTDP1-208ENST00000613122 FAM104AQ969W3 186 aa12.68□□□□□ -0.38
CTDP1-208ENST00000613122 HELZ2Q9BYK8 2649 aaKnown RBP12.68□□□□□ -0.38
CTDP1-208ENST00000613122 MAST4O15021 2626 aa12.65□□□□□ -0.38
CTDP1-208ENST00000613122 ITPR3Q14573 2671 aa12.64□□□□□ -0.39
CTDP1-208ENST00000613122 FAM229BQ4G0N7 80 aa12.64□□□□□ -0.39
CTDP1-208ENST00000613122 PRRC2CQ9Y520 2896 aaKnown RBP12.63□□□□□ -0.39
CTDP1-208ENST00000613122 A0A0D9SG42 100 aa12.61□□□□□ -0.39
CTDP1-208ENST00000613122 PLAC8Q9NZF1 115 aa12.61□□□□□ -0.39
CTDP1-208ENST00000613122 ATRQ13535 2644 aa12.61□□□□□ -0.39
CTDP1-208ENST00000613122 M0R2T5 61 aa12.59□□□□□ -0.39
CTDP1-208ENST00000613122 SPANXA2-OT1Q8N9U9 137 aa12.58□□□□□ -0.4
CTDP1-208ENST00000613122 H7BZZ5 65 aa12.56□□□□□ -0.4
CTDP1-208ENST00000613122 DNAH12Q6ZR08 3092 aa12.55□□□□□ -0.4
CTDP1-208ENST00000613122 BPTFQ12830 3046 aa12.55□□□□□ -0.4
CTDP1-208ENST00000613122 CDC42SE1Q9NRR8 79 aa12.49□□□□□ -0.41
CTDP1-208ENST00000613122 CR1P17927 2039 aa12.48□□□□□ -0.41
CTDP1-208ENST00000613122 UTRNP46939 3433 aa12.44□□□□□ -0.42
CTDP1-208ENST00000613122 CFAP46Q8IYW2 2715 aa12.43□□□□□ -0.42
CTDP1-208ENST00000613122 LCE6AA0A183 80 aa12.42□□□□□ -0.42
CTDP1-208ENST00000613122 Q5VSD8 79 aa12.4□□□□□ -0.42
CTDP1-208ENST00000613122 ZCCHC13Q8WW36 166 aaKnown RBP12.39□□□□□ -0.43
CTDP1-208ENST00000613122 CAMK2N1Q7Z7J9 78 aa12.38□□□□□ -0.43
CTDP1-208ENST00000613122 OCR1Q9BZK8 76 aa12.38□□□□□ -0.43
CTDP1-208ENST00000613122 SPRR1AP35321 89 aa12.37□□□□□ -0.43
CTDP1-208ENST00000613122 HRES1P13985 223 aa12.37□□□□□ -0.43
CTDP1-208ENST00000613122 KRTAP1-5Q9BYS1 174 aa12.35□□□□□ -0.43
CTDP1-208ENST00000613122 CSAG1Q6PB30 78 aa12.31□□□□□ -0.44
CTDP1-208ENST00000613122 MMP24-AS1A0A0U1RRL7 71 aa12.31□□□□□ -0.44
CTDP1-208ENST00000613122 Q8NDZ9 215 aa12.3□□□□□ -0.44
CTDP1-208ENST00000613122 SEC61BP60468 96 aaKnown RBP12.29□□□□□ -0.44
CTDP1-208ENST00000613122 S4R3F8 94 aa12.29□□□□□ -0.44
CTDP1-208ENST00000613122 KRTAP10-1P60331 282 aa12.28□□□□□ -0.44
CTDP1-208ENST00000613122 A0A1B0GU33 70 aa12.27□□□□□ -0.44
CTDP1-208ENST00000613122 SPRR1BP22528 89 aa12.27□□□□□ -0.45
CTDP1-208ENST00000613122 SETXQ7Z333 2677 aaKnown RBP12.27□□□□□ -0.45
CTDP1-208ENST00000613122 KRTAP10-2P60368 255 aa12.24□□□□□ -0.45
CTDP1-208ENST00000613122 CHD7Q9P2D1 2997 aa12.23□□□□□ -0.45
CTDP1-208ENST00000613122 Q8N9P0 234 aaPredicted RBP12.21□□□□□ -0.46
CTDP1-208ENST00000613122 CEP350Q5VT06 3117 aa12.18□□□□□ -0.46
CTDP1-208ENST00000613122 KRTAP26-1Q6PEX3 210 aa12.18□□□□□ -0.46
CTDP1-208ENST00000613122 SPINK7P58062 85 aa12.17□□□□□ -0.46
CTDP1-208ENST00000613122 KTN1-AS1Q86SY8 53 aa12.17□□□□□ -0.46
CTDP1-208ENST00000613122 STAB1Q9NY15 2570 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms