RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 C1orf134Q5TEV5 83 aa7.44□□□□□ -1.22
FAM3A-221ENST00000612856 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
FAM3A-221ENST00000612856 CDK2AP2O75956 126 aa7.43□□□□□ -1.22
FAM3A-221ENST00000612856 Q6ZQY7 126 aa7.43□□□□□ -1.22
FAM3A-221ENST00000612856 TENM2Q9NT68 2774 aa7.42□□□□□ -1.22
FAM3A-221ENST00000612856 Q8N814 137 aa7.42□□□□□ -1.22
FAM3A-221ENST00000612856 LINC01600Q96MT4 127 aa7.42□□□□□ -1.22
FAM3A-221ENST00000612856 IBA57-AS1B1ANH7 110 aa7.41□□□□□ -1.22
FAM3A-221ENST00000612856 PSPHP1O15172 72 aa7.41□□□□□ -1.22
FAM3A-221ENST00000612856 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
FAM3A-221ENST00000612856 IGLV5-52A0A0A0MRZ9 124 aa7.41□□□□□ -1.22
FAM3A-221ENST00000612856 LINC01547P58512 204 aaPredicted RBP7.41□□□□□ -1.22
FAM3A-221ENST00000612856 C14orf177Q52M58 125 aa7.41□□□□□ -1.22
FAM3A-221ENST00000612856 B9D2Q9BPU9 175 aa7.41□□□□□ -1.22
FAM3A-221ENST00000612856 H7BZZ5 65 aa7.4□□□□□ -1.22
FAM3A-221ENST00000612856 FAM104AQ969W3 186 aa7.4□□□□□ -1.22
FAM3A-221ENST00000612856 LINC00588Q9Y4M8 146 aa7.4□□□□□ -1.22
FAM3A-221ENST00000612856 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.23
FAM3A-221ENST00000612856 DIRC1Q969H9 104 aa7.4□□□□□ -1.23
FAM3A-221ENST00000612856 NREPQ16612 68 aa7.39□□□□□ -1.23
FAM3A-221ENST00000612856 Q6ZVQ6 151 aa7.39□□□□□ -1.23
FAM3A-221ENST00000612856 C22orf24Q9Y442 160 aa7.39□□□□□ -1.23
FAM3A-221ENST00000612856 C3orf84H3BNL1 204 aa7.38□□□□□ -1.23
FAM3A-221ENST00000612856 DNAH10OSP0CZ25 163 aa7.38□□□□□ -1.23
FAM3A-221ENST00000612856 CSNK1G2-AS1Q8NCQ2 148 aa7.38□□□□□ -1.23
FAM3A-221ENST00000612856 Q6ZRU5 148 aa7.38□□□□□ -1.23
FAM3A-221ENST00000612856 TRRAPQ9Y4A5 3859 aa7.38□□□□□ -1.23
FAM3A-221ENST00000612856 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
FAM3A-221ENST00000612856 BPY2O14599 106 aa7.37□□□□□ -1.23
FAM3A-221ENST00000612856 TMEM254Q8TBM7 123 aa7.37□□□□□ -1.23
FAM3A-221ENST00000612856 WWC2-AS2Q96NR7 200 aa7.37□□□□□ -1.23
FAM3A-221ENST00000612856 IGLV5-45A0A087WSX0 123 aa7.36□□□□□ -1.23
FAM3A-221ENST00000612856 SPINK6Q6UWN8 80 aa7.36□□□□□ -1.23
FAM3A-221ENST00000612856 CHTF8P0CG12 524 aa7.35□□□□□ -1.23
FAM3A-221ENST00000612856 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
FAM3A-221ENST00000612856 IGLV9-49A0A0B4J1Y8 123 aa7.35□□□□□ -1.23
FAM3A-221ENST00000612856 C10orf25Q5T742 122 aa7.35□□□□□ -1.23
FAM3A-221ENST00000612856 FAM30AQ9NZY2 134 aa7.35□□□□□ -1.23
FAM3A-221ENST00000612856 COX7BP24311 80 aa7.34□□□□□ -1.23
FAM3A-221ENST00000612856 NDUFC1O43677 76 aa7.34□□□□□ -1.24
FAM3A-221ENST00000612856 NDUFS5O43920 106 aa7.33□□□□□ -1.24
FAM3A-221ENST00000612856 FP248Q71RG6 208 aaPredicted RBP7.33□□□□□ -1.24
FAM3A-221ENST00000612856 C7orf33Q8WU49 177 aa7.33□□□□□ -1.24
FAM3A-221ENST00000612856 F8WDY8 70 aa7.33□□□□□ -1.24
FAM3A-221ENST00000612856 LINC01556Q5JQF7 62 aa7.33□□□□□ -1.24
FAM3A-221ENST00000612856 AKAP9Q99996 3911 aa7.32□□□□□ -1.24
FAM3A-221ENST00000612856 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.32□□□□□ -1.24
FAM3A-221ENST00000612856 FAM19A3Q7Z5A8 133 aa7.32□□□□□ -1.24
FAM3A-221ENST00000612856 PMAIP1Q13794 54 aa7.32□□□□□ -1.24
FAM3A-221ENST00000612856 TRBV10-3A0A0K0K1G6 114 aa7.31□□□□□ -1.24
FAM3A-221ENST00000612856 PRYO14603 147 aa7.3□□□□□ -1.24
FAM3A-221ENST00000612856 PRLHP81277 87 aa7.3□□□□□ -1.24
FAM3A-221ENST00000612856 ANK3Q12955 4377 aaKnown RBP7.3□□□□□ -1.24
FAM3A-221ENST00000612856 PLAC8L1A1L4L8 177 aa7.3□□□□□ -1.24
FAM3A-221ENST00000612856 Q8IZM0 81 aa7.3□□□□□ -1.24
FAM3A-221ENST00000612856 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
FAM3A-221ENST00000612856 NBDYA0A0U1RRE5 68 aa7.29□□□□□ -1.24
FAM3A-221ENST00000612856 MRPL55Q7Z7F7 128 aaKnown RBP7.29□□□□□ -1.24
FAM3A-221ENST00000612856 SMR3BP02814 79 aaPredicted RBP7.29□□□□□ -1.24
FAM3A-221ENST00000612856 A0A1B0GUV1 79 aa7.28□□□□□ -1.24
FAM3A-221ENST00000612856 C1orf137Q5JT78 98 aa7.28□□□□□ -1.24
FAM3A-221ENST00000612856 KLKP1Q107X0 134 aa7.27□□□□□ -1.24
FAM3A-221ENST00000612856 Q6ZQT0 140 aa7.27□□□□□ -1.24
FAM3A-221ENST00000612856 C16orf90A8MZG2 172 aa7.27□□□□□ -1.25
FAM3A-221ENST00000612856 FAM229BQ4G0N7 80 aa7.27□□□□□ -1.25
FAM3A-221ENST00000612856 PDE6GP18545 87 aa7.27□□□□□ -1.25
FAM3A-221ENST00000612856 ATP5EP56381 51 aaPredicted RBP7.27□□□□□ -1.25
FAM3A-221ENST00000612856 CASC10Q5T4H9 136 aa7.27□□□□□ -1.25
FAM3A-221ENST00000612856 LINC00575Q6W349 94 aa7.27□□□□□ -1.25
FAM3A-221ENST00000612856 H0Y9J4 135 aa7.25□□□□□ -1.25
FAM3A-221ENST00000612856 EGFEM1PQ0D2K5 195 aa7.25□□□□□ -1.25
FAM3A-221ENST00000612856 ZNF73O43830 326 aaPredicted RBP7.24□□□□□ -1.25
FAM3A-221ENST00000612856 CHKB-CPT1BH3BT56 60 aa7.24□□□□□ -1.25
FAM3A-221ENST00000612856 M0R378 163 aa7.23□□□□□ -1.25
FAM3A-221ENST00000612856 OBSCN-AS1Q96MR7 158 aa7.23□□□□□ -1.25
FAM3A-221ENST00000612856 DEFB116Q30KQ4 102 aa7.22□□□□□ -1.25
FAM3A-221ENST00000612856 CIRBP-AS1Q8TBR5 109 aa7.22□□□□□ -1.25
FAM3A-221ENST00000612856 C6orf48Q9UBA6 75 aa7.22□□□□□ -1.25
FAM3A-221ENST00000612856 PHF5AQ7RTV0 110 aaKnown RBP7.21□□□□□ -1.25
FAM3A-221ENST00000612856 FAM168BA1KXE4 195 aa7.2□□□□□ -1.26
FAM3A-221ENST00000612856 CXCL6P80162 114 aa7.2□□□□□ -1.26
FAM3A-221ENST00000612856 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
FAM3A-221ENST00000612856 WFDC13Q8IUB5 93 aa7.19□□□□□ -1.26
FAM3A-221ENST00000612856 RTL8CO15255 209 aa7.19□□□□□ -1.26
FAM3A-221ENST00000612856 A8MUN3 132 aa7.17□□□□□ -1.26
FAM3A-221ENST00000612856 A6NED7 52 aa7.17□□□□□ -1.26
FAM3A-221ENST00000612856 MP68P56378 58 aa7.16□□□□□ -1.26
FAM3A-221ENST00000612856 LINC00167Q96N53 147 aa7.16□□□□□ -1.26
FAM3A-221ENST00000612856 REG3GQ6UW15 175 aa7.15□□□□□ -1.27
FAM3A-221ENST00000612856 PRR15LQ9BU68 103 aa7.15□□□□□ -1.27
FAM3A-221ENST00000612856 TRBV7-4A0A0J9YYF1 115 aa7.14□□□□□ -1.27
FAM3A-221ENST00000612856 BCE1O60756 84 aa7.14□□□□□ -1.27
FAM3A-221ENST00000612856 Q6ZRP5 223 aa7.14□□□□□ -1.27
FAM3A-221ENST00000612856 LOC110117498A0A087WWA1 95 aa7.14□□□□□ -1.27
FAM3A-221ENST00000612856 C1orf64Q8NEQ6 169 aa7.14□□□□□ -1.27
FAM3A-221ENST00000612856 LINC00208Q96KT6 92 aa7.13□□□□□ -1.27
FAM3A-221ENST00000612856 COX17Q14061 63 aa7.12□□□□□ -1.27
FAM3A-221ENST00000612856 H3BNG1 76 aa7.12□□□□□ -1.27
FAM3A-221ENST00000612856 TNP2Q05952 138 aa7.12□□□□□ -1.27
FAM3A-221ENST00000612856 NDUFB1O75438 58 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms