RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 TRAV23DV6A0A075B6W5 121 aa12.52□□□□□ -0.41
MMP28-203ENST00000612672 EIF4EBP3O60516 100 aaPredicted RBP12.52□□□□□ -0.41
MMP28-203ENST00000612672 MAP1LC3CQ9BXW4 147 aa12.52□□□□□ -0.41
MMP28-203ENST00000612672 LINC00587B1AMM8 73 aa12.51□□□□□ -0.41
MMP28-203ENST00000612672 SOSTDC1Q6X4U4 206 aa12.49□□□□□ -0.41
MMP28-203ENST00000612672 LIMD2Q9BT23 127 aa12.49□□□□□ -0.41
MMP28-203ENST00000612672 ZNF73O43830 326 aaPredicted RBP12.48□□□□□ -0.41
MMP28-203ENST00000612672 USH2AO75445 5202 aa12.47□□□□□ -0.41
MMP28-203ENST00000612672 KRTAP9-7A8MTY7 169 aa12.47□□□□□ -0.41
MMP28-203ENST00000612672 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.47□□□□□ -0.41
MMP28-203ENST00000612672 JOSD1Q15040 202 aaPredicted RBP12.47□□□□□ -0.41
MMP28-203ENST00000612672 S100A7L2Q5SY68 101 aa12.47□□□□□ -0.41
MMP28-203ENST00000612672 TRGC2P03986 189 aa12.46□□□□□ -0.41
MMP28-203ENST00000612672 SPRR1BP22528 89 aa12.46□□□□□ -0.41
MMP28-203ENST00000612672 LEPROTO15243 131 aa12.45□□□□□ -0.42
MMP28-203ENST00000612672 NDUFC2O95298 119 aa12.45□□□□□ -0.42
MMP28-203ENST00000612672 NPC2P61916 151 aa12.44□□□□□ -0.42
MMP28-203ENST00000612672 H0Y8G0 127 aa12.42□□□□□ -0.42
MMP28-203ENST00000612672 CHCHD1Q96BP2 118 aaKnown RBP12.42□□□□□ -0.42
MMP28-203ENST00000612672 COLCA2A8K830 154 aa12.41□□□□□ -0.42
MMP28-203ENST00000612672 COX6B2Q6YFQ2 88 aa12.41□□□□□ -0.42
MMP28-203ENST00000612672 C5orf52A6NGY3 159 aa12.4□□□□□ -0.42
MMP28-203ENST00000612672 J3QQQ9 107 aa12.4□□□□□ -0.42
MMP28-203ENST00000612672 LINC00310P59036 64 aa12.4□□□□□ -0.42
MMP28-203ENST00000612672 RPL37P61927 97 aaKnown RBP12.4□□□□□ -0.42
MMP28-203ENST00000612672 MIEN1Q9BRT3 115 aa12.4□□□□□ -0.42
MMP28-203ENST00000612672 H7C2G1 150 aa12.39□□□□□ -0.43
MMP28-203ENST00000612672 ADAMTSL4-AS1Q5T5F5 129 aa12.39□□□□□ -0.43
MMP28-203ENST00000612672 C1orf195Q5TG92 126 aa12.36□□□□□ -0.43
MMP28-203ENST00000612672 HSBP1O75506 76 aa12.34□□□□□ -0.43
MMP28-203ENST00000612672 SERF1AO75920 110 aa12.34□□□□□ -0.43
MMP28-203ENST00000612672 Q1RN00 199 aa12.33□□□□□ -0.44
MMP28-203ENST00000612672 LAMTOR3Q9UHA4 124 aa12.33□□□□□ -0.44
MMP28-203ENST00000612672 A0A0G2JQZ4 141 aa12.32□□□□□ -0.44
MMP28-203ENST00000612672 CD164Q04900 197 aa12.32□□□□□ -0.44
MMP28-203ENST00000612672 PMCHL2Q9BQD1 86 aa12.32□□□□□ -0.44
MMP28-203ENST00000612672 NMUP48645 174 aa12.31□□□□□ -0.44
MMP28-203ENST00000612672 A0A0J9YXY3 114 aa12.3□□□□□ -0.44
MMP28-203ENST00000612672 SLC25A34Q6PIV7 304 aa12.3□□□□□ -0.44
MMP28-203ENST00000612672 LGALS3P17931 250 aaKnown RBP12.29□□□□□ -0.44
MMP28-203ENST00000612672 PLNP26678 52 aa12.28□□□□□ -0.44
MMP28-203ENST00000612672 Q5XG85 94 aa12.28□□□□□ -0.44
MMP28-203ENST00000612672 DHRS4-AS1Q9P1J3 65 aa12.28□□□□□ -0.44
MMP28-203ENST00000612672 HINT1P49773 126 aaPredicted RBP12.26□□□□□ -0.45
MMP28-203ENST00000612672 SMIM29Q86T20 159 aa12.26□□□□□ -0.45
MMP28-203ENST00000612672 PRO1933Q9H354 126 aa12.26□□□□□ -0.45
MMP28-203ENST00000612672 DPM2O94777 84 aa12.25□□□□□ -0.45
MMP28-203ENST00000612672 LEPROTL1O95214 131 aa12.25□□□□□ -0.45
MMP28-203ENST00000612672 DEFB105AQ8NG35 78 aa12.25□□□□□ -0.45
MMP28-203ENST00000612672 LITAFQ99732 161 aa12.25□□□□□ -0.45
MMP28-203ENST00000612672 ELOF1P60002 83 aaKnown RBP12.24□□□□□ -0.45
MMP28-203ENST00000612672 HERVK_113P61574 105 aa12.24□□□□□ -0.45
MMP28-203ENST00000612672 OR13C6PQ8NH95 151 aa12.24□□□□□ -0.45
MMP28-203ENST00000612672 FCGBPQ9Y6R7 5405 aaPredicted RBP12.24□□□□□ -0.45
MMP28-203ENST00000612672 FABP4P15090 132 aa12.23□□□□□ -0.45
MMP28-203ENST00000612672 LINC00308Q8TCZ7 52 aa12.22□□□□□ -0.45
MMP28-203ENST00000612672 HIST1H2BKO60814 126 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 IGKCP01834 107 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 HIST1H2BJP06899 126 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 HIST1H2BOP23527 126 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 HIST1H2BBP33778 126 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 HIST1H2BDP58876 126 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 HIST1H2BCP62807 126 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 HIST2H2BEQ16778 126 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.21□□□□□ -0.45
MMP28-203ENST00000612672 HIST1H2BHQ93079 126 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 HIST1H2BNQ99877 126 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 HIST1H2BMQ99879 126 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 SPANXCQ9NY87 97 aa12.21□□□□□ -0.45
MMP28-203ENST00000612672 COX7BP24311 80 aa12.2□□□□□ -0.46
MMP28-203ENST00000612672 TAL2Q16559 108 aa12.2□□□□□ -0.46
MMP28-203ENST00000612672 C6orf99Q4VX62 202 aa12.19□□□□□ -0.46
MMP28-203ENST00000612672 KRTAP9-8Q9BYQ0 159 aa12.19□□□□□ -0.46
MMP28-203ENST00000612672 CBY1Q9Y3M2 126 aa12.18□□□□□ -0.46
MMP28-203ENST00000612672 TEX49A0A1B0GTD5 131 aa12.17□□□□□ -0.46
MMP28-203ENST00000612672 HSPB8Q9UJY1 196 aa12.17□□□□□ -0.46
MMP28-203ENST00000612672 AKR1D1P51857 326 aa12.16□□□□□ -0.46
MMP28-203ENST00000612672 Q6Q795 121 aa12.16□□□□□ -0.46
MMP28-203ENST00000612672 SPANXDQ9BXN6 97 aa12.16□□□□□ -0.46
MMP28-203ENST00000612672 E9PLD3 99 aa12.15□□□□□ -0.46
MMP28-203ENST00000612672 IGLV5-48A0A075B6I7 105 aa12.11□□□□□ -0.47
MMP28-203ENST00000612672 TIMM17BO60830 172 aa12.07□□□□□ -0.48
MMP28-203ENST00000612672 SYS1-DBNDD2H3BUS1 97 aa12.06□□□□□ -0.48
MMP28-203ENST00000612672 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
MMP28-203ENST00000612672 CFC1P0CG37 223 aa12.04□□□□□ -0.48
MMP28-203ENST00000612672 COA6Q5JTJ3 125 aaKnown RBP12.04□□□□□ -0.48
MMP28-203ENST00000612672 TRBV7-6A0A0J9YX20 115 aa12.02□□□□□ -0.49
MMP28-203ENST00000612672 TCL1BO95988 128 aa12.01□□□□□ -0.49
MMP28-203ENST00000612672 LINC01545Q5VT33 79 aa12.01□□□□□ -0.49
MMP28-203ENST00000612672 A0A1B0GWB2 263 aa11.99□□□□□ -0.49
MMP28-203ENST00000612672 C3orf79P0CE67 100 aa11.99□□□□□ -0.49
MMP28-203ENST00000612672 Q75L30 129 aa11.99□□□□□ -0.49
MMP28-203ENST00000612672 LINC00518Q8N0U6 118 aa11.99□□□□□ -0.49
MMP28-203ENST00000612672 OBSCN-AS1Q96MR7 158 aa11.99□□□□□ -0.49
MMP28-203ENST00000612672 ZNF815PA8K554 130 aa11.98□□□□□ -0.49
MMP28-203ENST00000612672 KRTAP19-1Q8IUB9 90 aa11.98□□□□□ -0.49
MMP28-203ENST00000612672 PET117Q6UWS5 81 aa11.97□□□□□ -0.49
MMP28-203ENST00000612672 PCP2Q8IVA1 136 aa11.97□□□□□ -0.49
MMP28-203ENST00000612672 LCE2BO14633 110 aa11.96□□□□□ -0.49
MMP28-203ENST00000612672 ATP11AUNQ6ZP68 121 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms