RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 DNAH7Q8WXX0 4024 aa9.18□□□□□ -0.94
PCDHGA3-202ENST00000612467 OXTP01178 125 aa9.18□□□□□ -0.94
PCDHGA3-202ENST00000612467 C5orf47Q569G3 176 aa9.17□□□□□ -0.94
PCDHGA3-202ENST00000612467 J3KT08 172 aa9.17□□□□□ -0.94
PCDHGA3-202ENST00000612467 TM2D3Q9BRN9 247 aa9.17□□□□□ -0.94
PCDHGA3-202ENST00000612467 C7orf33Q8WU49 177 aa9.16□□□□□ -0.94
PCDHGA3-202ENST00000612467 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.95
PCDHGA3-202ENST00000612467 DEFB105AQ8NG35 78 aa9.15□□□□□ -0.95
PCDHGA3-202ENST00000612467 DSCR8Q96T75 97 aa9.14□□□□□ -0.95
PCDHGA3-202ENST00000612467 KRTAP7-1Q8IUC3 87 aa9.13□□□□□ -0.95
PCDHGA3-202ENST00000612467 NKAPP1Q8N9T2 125 aa9.13□□□□□ -0.95
PCDHGA3-202ENST00000612467 SCXQ7RTU7 201 aa9.13□□□□□ -0.95
PCDHGA3-202ENST00000612467 CRYGAP11844 174 aa9.12□□□□□ -0.95
PCDHGA3-202ENST00000612467 KRTAP1-5Q9BYS1 174 aa9.12□□□□□ -0.95
PCDHGA3-202ENST00000612467 C4orf26Q17RF5 130 aa9.11□□□□□ -0.95
PCDHGA3-202ENST00000612467 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.11□□□□□ -0.95
PCDHGA3-202ENST00000612467 HAMPP81172 84 aa9.11□□□□□ -0.95
PCDHGA3-202ENST00000612467 UBL5Q9BZL1 73 aa9.11□□□□□ -0.95
PCDHGA3-202ENST00000612467 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
PCDHGA3-202ENST00000612467 DPH3Q96FX2 82 aa9.1□□□□□ -0.95
PCDHGA3-202ENST00000612467 Q6ZVQ6 151 aa9.09□□□□□ -0.95
PCDHGA3-202ENST00000612467 PLECQ15149 4684 aaKnown RBP9.08□□□□□ -0.96
PCDHGA3-202ENST00000612467 UPK3BQ9BT76 320 aa9.08□□□□□ -0.96
PCDHGA3-202ENST00000612467 TRBV7-4A0A0J9YYF1 115 aa9.07□□□□□ -0.96
PCDHGA3-202ENST00000612467 ATOX1O00244 68 aa9.07□□□□□ -0.96
PCDHGA3-202ENST00000612467 LINC01547P58512 204 aaPredicted RBP9.07□□□□□ -0.96
PCDHGA3-202ENST00000612467 HRCT1Q6UXD1 115 aa9.07□□□□□ -0.96
PCDHGA3-202ENST00000612467 ST20-AS1Q8NBB2 130 aa9.07□□□□□ -0.96
PCDHGA3-202ENST00000612467 SRRM2Q9UQ35 2752 aaKnown RBP9.07□□□□□ -0.96
PCDHGA3-202ENST00000612467 KCNQ1DNQ9H478 68 aa9.06□□□□□ -0.96
PCDHGA3-202ENST00000612467 Q9BRP9 147 aa9.06□□□□□ -0.96
PCDHGA3-202ENST00000612467 TRBV7-6A0A0J9YX20 115 aa9.05□□□□□ -0.96
PCDHGA3-202ENST00000612467 MDFIQ99750 246 aa9.05□□□□□ -0.96
PCDHGA3-202ENST00000612467 IGKV2-24A0A0C4DH68 120 aa9.04□□□□□ -0.96
PCDHGA3-202ENST00000612467 RPS28P62857 69 aaKnown RBP9.04□□□□□ -0.96
PCDHGA3-202ENST00000612467 Q8N377 158 aa9.04□□□□□ -0.96
PCDHGA3-202ENST00000612467 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.03□□□□□ -0.96
PCDHGA3-202ENST00000612467 C3orf84H3BNL1 204 aa9.03□□□□□ -0.96
PCDHGA3-202ENST00000612467 ERC2-IT1O76042 136 aa9.03□□□□□ -0.96
PCDHGA3-202ENST00000612467 GHRHP01286 108 aa9.03□□□□□ -0.96
PCDHGA3-202ENST00000612467 Q5XG85 94 aa9.03□□□□□ -0.96
PCDHGA3-202ENST00000612467 Q8N9L7 120 aa9.03□□□□□ -0.96
PCDHGA3-202ENST00000612467 IGLV1-50A0A075B6I6 118 aa9.03□□□□□ -0.96
PCDHGA3-202ENST00000612467 TLX1NBP0CAT3 122 aa9.03□□□□□ -0.96
PCDHGA3-202ENST00000612467 SERP2Q8N6R1 65 aa9.03□□□□□ -0.96
PCDHGA3-202ENST00000612467 KRTAP4-16G5E9R7 235 aaPredicted RBP9.01□□□□□ -0.97
PCDHGA3-202ENST00000612467 A0A0G2JQZ4 141 aa9□□□□□ -0.97
PCDHGA3-202ENST00000612467 A0A1W2PNN7 141 aa9□□□□□ -0.97
PCDHGA3-202ENST00000612467 Q6ZRX8 168 aa9□□□□□ -0.97
PCDHGA3-202ENST00000612467 F8WDY8 70 aa9□□□□□ -0.97
PCDHGA3-202ENST00000612467 ATP5EP2Q5VTU8 51 aa9□□□□□ -0.97
PCDHGA3-202ENST00000612467 A0A096LNI7 61 aa8.99□□□□□ -0.97
PCDHGA3-202ENST00000612467 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
PCDHGA3-202ENST00000612467 TMEM258P61165 79 aa8.99□□□□□ -0.97
PCDHGA3-202ENST00000612467 MRPL55Q7Z7F7 128 aaKnown RBP8.99□□□□□ -0.97
PCDHGA3-202ENST00000612467 UBE2DNLQ8IWF7 75 aa8.98□□□□□ -0.97
PCDHGA3-202ENST00000612467 RMI2Q96E14 147 aa8.98□□□□□ -0.97
PCDHGA3-202ENST00000612467 CHTF8P0CG12 524 aa8.98□□□□□ -0.97
PCDHGA3-202ENST00000612467 PSCAO43653 123 aa8.97□□□□□ -0.97
PCDHGA3-202ENST00000612467 PDE6GP18545 87 aa8.97□□□□□ -0.97
PCDHGA3-202ENST00000612467 PRKDCP78527 4128 aaKnown RBP8.97□□□□□ -0.97
PCDHGA3-202ENST00000612467 UBE2BP63146 152 aa8.96□□□□□ -0.97
PCDHGA3-202ENST00000612467 STARD9Q9P2P6 4700 aa8.96□□□□□ -0.97
PCDHGA3-202ENST00000612467 PLA2G2DQ9UNK4 145 aa8.96□□□□□ -0.98
PCDHGA3-202ENST00000612467 H3BQ85 93 aa8.95□□□□□ -0.98
PCDHGA3-202ENST00000612467 SPRR1AP35321 89 aa8.95□□□□□ -0.98
PCDHGA3-202ENST00000612467 PRLHP81277 87 aa8.95□□□□□ -0.98
PCDHGA3-202ENST00000612467 APLNQ9ULZ1 77 aa8.95□□□□□ -0.98
PCDHGA3-202ENST00000612467 DYNC2H1Q8NCM8 4307 aaKnown RBP8.94□□□□□ -0.98
PCDHGA3-202ENST00000612467 IGLV5-37A0A075B6J1 123 aa8.94□□□□□ -0.98
PCDHGA3-202ENST00000612467 PRYO14603 147 aa8.94□□□□□ -0.98
PCDHGA3-202ENST00000612467 BPY2O14599 106 aa8.94□□□□□ -0.98
PCDHGA3-202ENST00000612467 KRTAP11-1Q8IUC1 163 aa8.94□□□□□ -0.98
PCDHGA3-202ENST00000612467 FUSP35637 526 aaKnown RBP eCLIP8.93□□□□□ -0.98
PCDHGA3-202ENST00000612467 C20orf197Q8N268 126 aa8.92□□□□□ -0.98
PCDHGA3-202ENST00000612467 A0A1W2PNM2 257 aa8.92□□□□□ -0.98
PCDHGA3-202ENST00000612467 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
PCDHGA3-202ENST00000612467 REG3GQ6UW15 175 aa8.91□□□□□ -0.98
PCDHGA3-202ENST00000612467 CXCL6P80162 114 aa8.9□□□□□ -0.98
PCDHGA3-202ENST00000612467 NREPQ16612 68 aa8.9□□□□□ -0.98
PCDHGA3-202ENST00000612467 IGLV5-48A0A075B6I7 105 aa8.89□□□□□ -0.99
PCDHGA3-202ENST00000612467 PHF5AQ7RTV0 110 aaKnown RBP8.89□□□□□ -0.99
PCDHGA3-202ENST00000612467 C1orf137Q5JT78 98 aa8.89□□□□□ -0.99
PCDHGA3-202ENST00000612467 HIGD2AQ9BW72 106 aa8.89□□□□□ -0.99
PCDHGA3-202ENST00000612467 TNP2Q05952 138 aa8.88□□□□□ -0.99
PCDHGA3-202ENST00000612467 SNURFQ9Y675 71 aa8.88□□□□□ -0.99
PCDHGA3-202ENST00000612467 C16orf90A8MZG2 172 aa8.87□□□□□ -0.99
PCDHGA3-202ENST00000612467 PANO1I0J062 215 aa8.87□□□□□ -0.99
PCDHGA3-202ENST00000612467 KMT2AQ03164 3969 aa8.87□□□□□ -0.99
PCDHGA3-202ENST00000612467 LINC00336Q6ZUF6 198 aa8.86□□□□□ -0.99
PCDHGA3-202ENST00000612467 SMIM29Q86T20 159 aa8.86□□□□□ -0.99
PCDHGA3-202ENST00000612467 DNHD1Q96M86 4753 aa8.86□□□□□ -0.99
PCDHGA3-202ENST00000612467 IGKV4-1P06312 121 aa8.86□□□□□ -0.99
PCDHGA3-202ENST00000612467 MEGF8Q7Z7M0 2845 aa8.85□□□□□ -0.99
PCDHGA3-202ENST00000612467 B9D2Q9BPU9 175 aa8.85□□□□□ -0.99
PCDHGA3-202ENST00000612467 CNBPP62633 177 aaKnown RBP8.84□□□□□ -0.99
PCDHGA3-202ENST00000612467 DEFB116Q30KQ4 102 aa8.83□□□□□ -1
PCDHGA3-202ENST00000612467 LINC00476Q8WZB0 136 aa8.82□□□□□ -1
PCDHGA3-202ENST00000612467 TGP01266 2768 aa8.82□□□□□ -1
PCDHGA3-202ENST00000612467 FAM236DA0A1B0GTK5 79 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms