RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 FAM168BA1KXE4 195 aa9.26□□□□□ -0.93
COL6A1-207ENST00000612273 C4orf26Q17RF5 130 aa9.26□□□□□ -0.93
COL6A1-207ENST00000612273 BPY2O14599 106 aa9.25□□□□□ -0.93
COL6A1-207ENST00000612273 ANK2Q01484 3957 aa9.25□□□□□ -0.93
COL6A1-207ENST00000612273 EGFEM1PQ0D2K5 195 aa9.25□□□□□ -0.93
COL6A1-207ENST00000612273 SYCNQ0VAF6 134 aa9.25□□□□□ -0.93
COL6A1-207ENST00000612273 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
COL6A1-207ENST00000612273 CASC10Q5T4H9 136 aa9.24□□□□□ -0.93
COL6A1-207ENST00000612273 TENM2Q9NT68 2774 aa9.23□□□□□ -0.93
COL6A1-207ENST00000612273 HRCT1Q6UXD1 115 aa9.23□□□□□ -0.93
COL6A1-207ENST00000612273 STAB2Q8WWQ8 2551 aa9.22□□□□□ -0.93
COL6A1-207ENST00000612273 TRBV7-4A0A0J9YYF1 115 aa9.22□□□□□ -0.93
COL6A1-207ENST00000612273 KRTAP26-1Q6PEX3 210 aa9.22□□□□□ -0.93
COL6A1-207ENST00000612273 NREPQ16612 68 aa9.22□□□□□ -0.93
COL6A1-207ENST00000612273 LINC00528Q8N1L1 170 aa9.22□□□□□ -0.93
COL6A1-207ENST00000612273 F8WEM9 126 aa9.22□□□□□ -0.93
COL6A1-207ENST00000612273 C11orf45Q8TAV5 145 aa9.22□□□□□ -0.93
COL6A1-207ENST00000612273 SRRM2Q9UQ35 2752 aaKnown RBP9.21□□□□□ -0.93
COL6A1-207ENST00000612273 A0A0G2JQZ4 141 aa9.21□□□□□ -0.93
COL6A1-207ENST00000612273 A0A1W2PNN7 141 aa9.21□□□□□ -0.93
COL6A1-207ENST00000612273 C7orf33Q8WU49 177 aa9.21□□□□□ -0.94
COL6A1-207ENST00000612273 TRAV7A0A075B6U4 112 aa9.2□□□□□ -0.94
COL6A1-207ENST00000612273 FAM236DA0A1B0GTK5 79 aa9.2□□□□□ -0.94
COL6A1-207ENST00000612273 FAM236CP0DP71 79 aa9.2□□□□□ -0.94
COL6A1-207ENST00000612273 ST20-AS1Q8NBB2 130 aa9.2□□□□□ -0.94
COL6A1-207ENST00000612273 PDE6GP18545 87 aa9.19□□□□□ -0.94
COL6A1-207ENST00000612273 H7BZZ5 65 aa9.18□□□□□ -0.94
COL6A1-207ENST00000612273 RPS28P62857 69 aaKnown RBP9.16□□□□□ -0.94
COL6A1-207ENST00000612273 CXCL6P80162 114 aa9.16□□□□□ -0.94
COL6A1-207ENST00000612273 Q8N377 158 aa9.16□□□□□ -0.94
COL6A1-207ENST00000612273 ETDCA0A1B0GVM5 59 aa9.14□□□□□ -0.95
COL6A1-207ENST00000612273 UBE2BP63146 152 aa9.14□□□□□ -0.95
COL6A1-207ENST00000612273 IGKV2-24A0A0C4DH68 120 aa9.14□□□□□ -0.95
COL6A1-207ENST00000612273 DEFB116Q30KQ4 102 aa9.13□□□□□ -0.95
COL6A1-207ENST00000612273 ERC2-IT1O76042 136 aa9.12□□□□□ -0.95
COL6A1-207ENST00000612273 LINC01556Q5JQF7 62 aa9.12□□□□□ -0.95
COL6A1-207ENST00000612273 FAM30AQ9NZY2 134 aa9.11□□□□□ -0.95
COL6A1-207ENST00000612273 Q9BRP9 147 aa9.11□□□□□ -0.95
COL6A1-207ENST00000612273 KRTAP24-1Q3LI83 254 aa9.1□□□□□ -0.95
COL6A1-207ENST00000612273 TRBV7-6A0A0J9YX20 115 aa9.1□□□□□ -0.95
COL6A1-207ENST00000612273 LINC00588Q9Y4M8 146 aa9.1□□□□□ -0.95
COL6A1-207ENST00000612273 IGKV4-1P06312 121 aa9.09□□□□□ -0.95
COL6A1-207ENST00000612273 Q5XG85 94 aa9.09□□□□□ -0.95
COL6A1-207ENST00000612273 TMEM254Q8TBM7 123 aa9.09□□□□□ -0.95
COL6A1-207ENST00000612273 COL7A1Q02388 2944 aa9.09□□□□□ -0.95
COL6A1-207ENST00000612273 C5orf47Q569G3 176 aa9.09□□□□□ -0.95
COL6A1-207ENST00000612273 LINC00474Q9P2X8 69 aa9.09□□□□□ -0.95
COL6A1-207ENST00000612273 C1orf137Q5JT78 98 aa9.08□□□□□ -0.96
COL6A1-207ENST00000612273 H3BQ85 93 aa9.08□□□□□ -0.96
COL6A1-207ENST00000612273 FUSP35637 526 aaKnown RBP eCLIP9.08□□□□□ -0.96
COL6A1-207ENST00000612273 HIGD2AQ9BW72 106 aa9.08□□□□□ -0.96
COL6A1-207ENST00000612273 KCNQ1DNQ9H478 68 aa9.08□□□□□ -0.96
COL6A1-207ENST00000612273 KLKP1Q107X0 134 aa9.07□□□□□ -0.96
COL6A1-207ENST00000612273 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.07□□□□□ -0.96
COL6A1-207ENST00000612273 A0A1W2PNM2 257 aa9.07□□□□□ -0.96
COL6A1-207ENST00000612273 H3BNG1 76 aa9.07□□□□□ -0.96
COL6A1-207ENST00000612273 SMIM29Q86T20 159 aa9.07□□□□□ -0.96
COL6A1-207ENST00000612273 Q6ZRX8 168 aa9.06□□□□□ -0.96
COL6A1-207ENST00000612273 PRLHP81277 87 aa9.06□□□□□ -0.96
COL6A1-207ENST00000612273 LRCOL1A6NCL2 159 aa9.05□□□□□ -0.96
COL6A1-207ENST00000612273 MPLKIPQ8TAP9 179 aa9.05□□□□□ -0.96
COL6A1-207ENST00000612273 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
COL6A1-207ENST00000612273 PRR4Q16378 134 aa9.04□□□□□ -0.96
COL6A1-207ENST00000612273 A0A096LNI7 61 aa9.04□□□□□ -0.96
COL6A1-207ENST00000612273 WIPF1O43516 503 aa9.03□□□□□ -0.96
COL6A1-207ENST00000612273 IGLV1-50A0A075B6I6 118 aa9.03□□□□□ -0.96
COL6A1-207ENST00000612273 MRPL55Q7Z7F7 128 aaKnown RBP9.03□□□□□ -0.96
COL6A1-207ENST00000612273 DNAH10OSP0CZ25 163 aa9.02□□□□□ -0.97
COL6A1-207ENST00000612273 SERP1Q9Y6X1 66 aa9.02□□□□□ -0.97
COL6A1-207ENST00000612273 DHRS4-AS1Q9P1J3 65 aa9□□□□□ -0.97
COL6A1-207ENST00000612273 K7EQZ3 153 aa9□□□□□ -0.97
COL6A1-207ENST00000612273 LYSTQ99698 3801 aa8.99□□□□□ -0.97
COL6A1-207ENST00000612273 PSCAO43653 123 aa8.99□□□□□ -0.97
COL6A1-207ENST00000612273 OCR1Q9BZK8 76 aa8.99□□□□□ -0.97
COL6A1-207ENST00000612273 IGLV5-48A0A075B6I7 105 aa8.98□□□□□ -0.97
COL6A1-207ENST00000612273 PRYO14603 147 aa8.98□□□□□ -0.97
COL6A1-207ENST00000612273 CHTF8P0CG12 524 aa8.98□□□□□ -0.97
COL6A1-207ENST00000612273 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
COL6A1-207ENST00000612273 FAM229BQ4G0N7 80 aa8.97□□□□□ -0.97
COL6A1-207ENST00000612273 DNAH10Q8IVF4 4471 aa8.97□□□□□ -0.97
COL6A1-207ENST00000612273 BCE1O60756 84 aa8.97□□□□□ -0.97
COL6A1-207ENST00000612273 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
COL6A1-207ENST00000612273 Q8NBF4 154 aa8.96□□□□□ -0.97
COL6A1-207ENST00000612273 REG3GQ6UW15 175 aa8.96□□□□□ -0.98
COL6A1-207ENST00000612273 LINC00336Q6ZUF6 198 aa8.96□□□□□ -0.98
COL6A1-207ENST00000612273 EPM2AB3EWF7 344 aa8.95□□□□□ -0.98
COL6A1-207ENST00000612273 KRTAP4-16G5E9R7 235 aaPredicted RBP8.95□□□□□ -0.98
COL6A1-207ENST00000612273 LINC00476Q8WZB0 136 aa8.95□□□□□ -0.98
COL6A1-207ENST00000612273 RPL37AP61513 92 aaKnown RBP8.95□□□□□ -0.98
COL6A1-207ENST00000612273 A0A087WSZ3 146 aa8.95□□□□□ -0.98
COL6A1-207ENST00000612273 KRTAP1-5Q9BYS1 174 aa8.94□□□□□ -0.98
COL6A1-207ENST00000612273 DSCR10P59022 87 aa8.93□□□□□ -0.98
COL6A1-207ENST00000612273 SMIM26A0A096LP01 95 aa8.91□□□□□ -0.98
COL6A1-207ENST00000612273 A0A0U1RQV1 116 aa8.91□□□□□ -0.98
COL6A1-207ENST00000612273 NDUFC1O43677 76 aa8.91□□□□□ -0.98
COL6A1-207ENST00000612273 TLX1NBP0CAT3 122 aa8.91□□□□□ -0.98
COL6A1-207ENST00000612273 UBE2DNLQ8IWF7 75 aa8.91□□□□□ -0.98
COL6A1-207ENST00000612273 TNP2Q05952 138 aa8.9□□□□□ -0.98
COL6A1-207ENST00000612273 PHF5AQ7RTV0 110 aaKnown RBP8.9□□□□□ -0.98
COL6A1-207ENST00000612273 SPRR1AP35321 89 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms