RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SPRR1AP35321 89 aa7.29□□□□□ -1.24
CBWD3-208ENST00000612050 PRR4Q16378 134 aa7.29□□□□□ -1.24
CBWD3-208ENST00000612050 SPANXCQ9NY87 97 aa7.29□□□□□ -1.24
CBWD3-208ENST00000612050 TRAV23DV6A0A075B6W5 121 aa7.28□□□□□ -1.24
CBWD3-208ENST00000612050 TSPAN13O95857 204 aa7.28□□□□□ -1.24
CBWD3-208ENST00000612050 SNRPEP62304 92 aaKnown RBP7.28□□□□□ -1.24
CBWD3-208ENST00000612050 LINC00304Q8N9R0 145 aa7.28□□□□□ -1.24
CBWD3-208ENST00000612050 OR13C6PQ8NH95 151 aa7.28□□□□□ -1.24
CBWD3-208ENST00000612050 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
CBWD3-208ENST00000612050 HSBP1L1C9JCN9 74 aa7.27□□□□□ -1.24
CBWD3-208ENST00000612050 LINC00518Q8N0U6 118 aa7.27□□□□□ -1.24
CBWD3-208ENST00000612050 SMCR5Q8TEV8 140 aa7.27□□□□□ -1.24
CBWD3-208ENST00000612050 SPRR4Q96PI1 79 aa7.27□□□□□ -1.24
CBWD3-208ENST00000612050 CTAG1AP78358 180 aa7.27□□□□□ -1.25
CBWD3-208ENST00000612050 ADAMTSL4-AS1Q5T5F5 129 aa7.27□□□□□ -1.25
CBWD3-208ENST00000612050 XP32Q5T750 250 aa7.27□□□□□ -1.25
CBWD3-208ENST00000612050 LINC00308Q8TCZ7 52 aa7.27□□□□□ -1.25
CBWD3-208ENST00000612050 HMCN2Q8NDA2 5059 aa7.26□□□□□ -1.25
CBWD3-208ENST00000612050 IGLV6-57P01721 117 aa7.26□□□□□ -1.25
CBWD3-208ENST00000612050 B5MCH6 92 aa7.25□□□□□ -1.25
CBWD3-208ENST00000612050 ZNF73O43830 326 aaPredicted RBP7.25□□□□□ -1.25
CBWD3-208ENST00000612050 SPAG11AQ6PDA7 123 aa7.25□□□□□ -1.25
CBWD3-208ENST00000612050 Q6ZRX8 168 aa7.25□□□□□ -1.25
CBWD3-208ENST00000612050 Q6ZVH6 145 aa7.25□□□□□ -1.25
CBWD3-208ENST00000612050 KRTAP4-16G5E9R7 235 aaPredicted RBP7.24□□□□□ -1.25
CBWD3-208ENST00000612050 KRTAP13-2Q52LG2 175 aa7.24□□□□□ -1.25
CBWD3-208ENST00000612050 SOSTDC1Q6X4U4 206 aa7.24□□□□□ -1.25
CBWD3-208ENST00000612050 ATOH7Q8N100 152 aa7.24□□□□□ -1.25
CBWD3-208ENST00000612050 SPANXDQ9BXN6 97 aa7.24□□□□□ -1.25
CBWD3-208ENST00000612050 IFITM1P13164 125 aa7.23□□□□□ -1.25
CBWD3-208ENST00000612050 GAGE2AQ6NT46 116 aa7.22□□□□□ -1.25
CBWD3-208ENST00000612050 LITAFQ99732 161 aa7.22□□□□□ -1.25
CBWD3-208ENST00000612050 PPDPFQ9H3Y8 114 aa7.22□□□□□ -1.25
CBWD3-208ENST00000612050 HIST3H2BBQ8N257 126 aa7.21□□□□□ -1.25
CBWD3-208ENST00000612050 TTTY13Q9BZ97 58 aa7.21□□□□□ -1.25
CBWD3-208ENST00000612050 ANKRD39Q53RE8 183 aa7.2□□□□□ -1.26
CBWD3-208ENST00000612050 C3orf22Q8N5N4 141 aa7.2□□□□□ -1.26
CBWD3-208ENST00000612050 HIST1H2BLQ99880 126 aa7.2□□□□□ -1.26
CBWD3-208ENST00000612050 C5orf52A6NGY3 159 aa7.19□□□□□ -1.26
CBWD3-208ENST00000612050 SLC25A34Q6PIV7 304 aa7.19□□□□□ -1.26
CBWD3-208ENST00000612050 DHRS4-AS1Q9P1J3 65 aa7.19□□□□□ -1.26
CBWD3-208ENST00000612050 LINC00483Q53H64 154 aa7.18□□□□□ -1.26
CBWD3-208ENST00000612050 IGLV9-49A0A0B4J1Y8 123 aa7.18□□□□□ -1.26
CBWD3-208ENST00000612050 A6NDN8 102 aa7.18□□□□□ -1.26
CBWD3-208ENST00000612050 Q9BRP9 147 aa7.18□□□□□ -1.26
CBWD3-208ENST00000612050 SCGB1D1O95968 90 aa7.17□□□□□ -1.26
CBWD3-208ENST00000612050 COX7BP24311 80 aa7.17□□□□□ -1.26
CBWD3-208ENST00000612050 SSBP3-AS1Q7Z2R9 100 aa7.17□□□□□ -1.26
CBWD3-208ENST00000612050 PCP2Q8IVA1 136 aa7.17□□□□□ -1.26
CBWD3-208ENST00000612050 Q8NBF4 154 aa7.17□□□□□ -1.26
CBWD3-208ENST00000612050 TRAV13-2A0A0B4J235 113 aa7.16□□□□□ -1.26
CBWD3-208ENST00000612050 SPINK1P00995 79 aa7.16□□□□□ -1.26
CBWD3-208ENST00000612050 MOBPQ13875 183 aa7.16□□□□□ -1.26
CBWD3-208ENST00000612050 C6orf99Q4VX62 202 aa7.16□□□□□ -1.26
CBWD3-208ENST00000612050 C9orf153Q5TBE3 101 aa7.16□□□□□ -1.26
CBWD3-208ENST00000612050 ERC2-IT1O76042 136 aa7.15□□□□□ -1.27
CBWD3-208ENST00000612050 MUSTN1Q8IVN3 82 aa7.15□□□□□ -1.27
CBWD3-208ENST00000612050 TRBV7-6A0A0J9YX20 115 aa7.13□□□□□ -1.27
CBWD3-208ENST00000612050 A0A1B0GWB2 263 aa7.13□□□□□ -1.27
CBWD3-208ENST00000612050 A4D1N5 150 aa7.13□□□□□ -1.27
CBWD3-208ENST00000612050 ELOF1P60002 83 aaKnown RBP7.13□□□□□ -1.27
CBWD3-208ENST00000612050 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
CBWD3-208ENST00000612050 NHP2Q9NX24 153 aaKnown RBP7.13□□□□□ -1.27
CBWD3-208ENST00000612050 VAMP3Q15836 100 aa7.12□□□□□ -1.27
CBWD3-208ENST00000612050 TAL2Q16559 108 aa7.12□□□□□ -1.27
CBWD3-208ENST00000612050 LAMTOR3Q9UHA4 124 aa7.12□□□□□ -1.27
CBWD3-208ENST00000612050 IGLV7-46A0A075B6I9 117 aa7.11□□□□□ -1.27
CBWD3-208ENST00000612050 SLC25A20O43772 301 aa7.1□□□□□ -1.27
CBWD3-208ENST00000612050 FP248Q71RG6 208 aaPredicted RBP7.1□□□□□ -1.27
CBWD3-208ENST00000612050 KRTAP4-8Q9BYQ9 185 aa7.1□□□□□ -1.27
CBWD3-208ENST00000612050 CDIP1Q9H305 208 aa7.1□□□□□ -1.27
CBWD3-208ENST00000612050 RPS29P62273 56 aaKnown RBP7.1□□□□□ -1.27
CBWD3-208ENST00000612050 ST20-AS1Q8NBB2 130 aa7.1□□□□□ -1.27
CBWD3-208ENST00000612050 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.27
CBWD3-208ENST00000612050 HIST1H4GQ99525 98 aa7.09□□□□□ -1.28
CBWD3-208ENST00000612050 TEX49A0A1B0GTD5 131 aa7.08□□□□□ -1.28
CBWD3-208ENST00000612050 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
CBWD3-208ENST00000612050 DEFB105AQ8NG35 78 aa7.08□□□□□ -1.28
CBWD3-208ENST00000612050 LRP2P98164 4655 aa7.07□□□□□ -1.28
CBWD3-208ENST00000612050 SPRR1BP22528 89 aa7.07□□□□□ -1.28
CBWD3-208ENST00000612050 COX8AP10176 69 aa7.06□□□□□ -1.28
CBWD3-208ENST00000612050 LIMD2Q9BT23 127 aa7.06□□□□□ -1.28
CBWD3-208ENST00000612050 H3BS24 57 aa7.05□□□□□ -1.28
CBWD3-208ENST00000612050 SMIM11BQ8TCY0 68 aa7.05□□□□□ -1.28
CBWD3-208ENST00000612050 VAMP8Q9BV40 100 aa7.05□□□□□ -1.28
CBWD3-208ENST00000612050 A0A0U1RQV1 116 aa7.04□□□□□ -1.28
CBWD3-208ENST00000612050 DLEU1O43261 78 aa7.03□□□□□ -1.28
CBWD3-208ENST00000612050 SNCGO76070 127 aa7.03□□□□□ -1.28
CBWD3-208ENST00000612050 Q1RN00 199 aa7.03□□□□□ -1.28
CBWD3-208ENST00000612050 PRO1933Q9H354 126 aa7.03□□□□□ -1.28
CBWD3-208ENST00000612050 F8WEM9 126 aa7.02□□□□□ -1.29
CBWD3-208ENST00000612050 SPATA45Q537H7 98 aa7.02□□□□□ -1.29
CBWD3-208ENST00000612050 PAM16Q9Y3D7 125 aa7.02□□□□□ -1.29
CBWD3-208ENST00000612050 BVES-AS1Q5T3Y7 98 aa7.01□□□□□ -1.29
CBWD3-208ENST00000612050 RAB37Q96AX2 223 aa7.01□□□□□ -1.29
CBWD3-208ENST00000612050 Q8N377 158 aa7.01□□□□□ -1.29
CBWD3-208ENST00000612050 H7C2G1 150 aa7□□□□□ -1.29
CBWD3-208ENST00000612050 C14orf144Q96I85 54 aa7□□□□□ -1.29
CBWD3-208ENST00000612050 C12orf57Q99622 126 aa7□□□□□ -1.29
CBWD3-208ENST00000612050 IGLV5-48A0A075B6I7 105 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms