RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 ATRQ13535 2644 aa7.91□□□□□ -1.14
TPM3-223ENST00000611659 TENM1Q9UKZ4 2725 aa7.91□□□□□ -1.14
TPM3-223ENST00000611659 SPART-AS1P0CW21 52 aa7.9□□□□□ -1.14
TPM3-223ENST00000611659 OCR1Q9BZK8 76 aa7.9□□□□□ -1.14
TPM3-223ENST00000611659 FAM30AQ9NZY2 134 aa7.89□□□□□ -1.15
TPM3-223ENST00000611659 APOC4P55056 127 aa7.89□□□□□ -1.15
TPM3-223ENST00000611659 ERC2-IT1O76042 136 aa7.88□□□□□ -1.15
TPM3-223ENST00000611659 WFDC10BQ8IUB3 73 aa7.88□□□□□ -1.15
TPM3-223ENST00000611659 Q8NAQ8 132 aa7.88□□□□□ -1.15
TPM3-223ENST00000611659 EGFEM1PQ0D2K5 195 aa7.87□□□□□ -1.15
TPM3-223ENST00000611659 OTOGQ6ZRI0 2925 aa7.87□□□□□ -1.15
TPM3-223ENST00000611659 TRRAPQ9Y4A5 3859 aa7.87□□□□□ -1.15
TPM3-223ENST00000611659 LRCOL1A6NCL2 159 aa7.87□□□□□ -1.15
TPM3-223ENST00000611659 SMIM29Q86T20 159 aa7.87□□□□□ -1.15
TPM3-223ENST00000611659 ESRGQ1W209 222 aa7.86□□□□□ -1.15
TPM3-223ENST00000611659 Q6ZRP5 223 aa7.86□□□□□ -1.15
TPM3-223ENST00000611659 NKAPP1Q8N9T2 125 aa7.85□□□□□ -1.15
TPM3-223ENST00000611659 KPRPQ5T749 579 aaPredicted RBP7.84□□□□□ -1.15
TPM3-223ENST00000611659 Q8N377 158 aa7.84□□□□□ -1.15
TPM3-223ENST00000611659 Q6ZTC4 211 aa7.84□□□□□ -1.15
TPM3-223ENST00000611659 C15orf56Q8N910 161 aa7.83□□□□□ -1.16
TPM3-223ENST00000611659 TEP1Q99973 2627 aaKnown RBP7.83□□□□□ -1.16
TPM3-223ENST00000611659 IGKV2D-24A0A075B6R9 120 aa7.82□□□□□ -1.16
TPM3-223ENST00000611659 RPL37AP8A6NKH3 93 aa7.82□□□□□ -1.16
TPM3-223ENST00000611659 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
TPM3-223ENST00000611659 C7orf33Q8WU49 177 aa7.8□□□□□ -1.16
TPM3-223ENST00000611659 C1orf195Q5TG92 126 aa7.8□□□□□ -1.16
TPM3-223ENST00000611659 INAFM1C9JVW0 142 aa7.79□□□□□ -1.16
TPM3-223ENST00000611659 A0A1W2PNM2 257 aa7.79□□□□□ -1.16
TPM3-223ENST00000611659 PRB2P02812 416 aaPredicted RBP7.79□□□□□ -1.16
TPM3-223ENST00000611659 SYCNQ0VAF6 134 aa7.79□□□□□ -1.16
TPM3-223ENST00000611659 PRR4Q16378 134 aa7.79□□□□□ -1.16
TPM3-223ENST00000611659 C1orf137Q5JT78 98 aa7.79□□□□□ -1.16
TPM3-223ENST00000611659 KRTAP26-1Q6PEX3 210 aa7.79□□□□□ -1.16
TPM3-223ENST00000611659 HIVEP1P15822 2718 aa7.78□□□□□ -1.16
TPM3-223ENST00000611659 ST20-AS1Q8NBB2 130 aa7.78□□□□□ -1.16
TPM3-223ENST00000611659 IGLV5-48A0A075B6I7 105 aa7.78□□□□□ -1.16
TPM3-223ENST00000611659 KCNQ1DNQ9H478 68 aa7.78□□□□□ -1.16
TPM3-223ENST00000611659 PKD1L1Q8TDX9 2849 aa7.78□□□□□ -1.16
TPM3-223ENST00000611659 ETDCA0A1B0GVM5 59 aa7.76□□□□□ -1.17
TPM3-223ENST00000611659 K7EQZ3 153 aa7.76□□□□□ -1.17
TPM3-223ENST00000611659 RETNQ9HD89 108 aa7.76□□□□□ -1.17
TPM3-223ENST00000611659 J3QKU1 62 aa7.75□□□□□ -1.17
TPM3-223ENST00000611659 C1orf64Q8NEQ6 169 aa7.75□□□□□ -1.17
TPM3-223ENST00000611659 hDV103S1A0JD37 113 aa7.75□□□□□ -1.17
TPM3-223ENST00000611659 FAM168BA1KXE4 195 aa7.75□□□□□ -1.17
TPM3-223ENST00000611659 Q9BRP9 147 aa7.75□□□□□ -1.17
TPM3-223ENST00000611659 Q6ZRX8 168 aa7.74□□□□□ -1.17
TPM3-223ENST00000611659 DHRS4-AS1Q9P1J3 65 aa7.74□□□□□ -1.17
TPM3-223ENST00000611659 Q8NBF4 154 aa7.74□□□□□ -1.17
TPM3-223ENST00000611659 NSD1Q96L73 2696 aaPredicted RBP7.73□□□□□ -1.17
TPM3-223ENST00000611659 F8P00451 2351 aa7.73□□□□□ -1.17
TPM3-223ENST00000611659 A0A0G2JQZ4 141 aa7.73□□□□□ -1.17
TPM3-223ENST00000611659 A0A1W2PNN7 141 aa7.73□□□□□ -1.17
TPM3-223ENST00000611659 PSPHP1O15172 72 aa7.73□□□□□ -1.17
TPM3-223ENST00000611659 DSCR10P59022 87 aa7.73□□□□□ -1.17
TPM3-223ENST00000611659 DEFB116Q30KQ4 102 aa7.73□□□□□ -1.17
TPM3-223ENST00000611659 UBE2BP63146 152 aa7.72□□□□□ -1.17
TPM3-223ENST00000611659 V9GYY9 64 aa7.72□□□□□ -1.17
TPM3-223ENST00000611659 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.71□□□□□ -1.18
TPM3-223ENST00000611659 WFDC13Q8IUB5 93 aa7.69□□□□□ -1.18
TPM3-223ENST00000611659 TNP2Q05952 138 aa7.69□□□□□ -1.18
TPM3-223ENST00000611659 LCE6AA0A183 80 aa7.68□□□□□ -1.18
TPM3-223ENST00000611659 HCG22E2RYF7 251 aa7.68□□□□□ -1.18
TPM3-223ENST00000611659 IGLV1-50A0A075B6I6 118 aa7.68□□□□□ -1.18
TPM3-223ENST00000611659 A0A1B0GW54 56 aa7.68□□□□□ -1.18
TPM3-223ENST00000611659 OXLD1Q5BKU9 147 aa7.67□□□□□ -1.18
TPM3-223ENST00000611659 PSCAO43653 123 aa7.67□□□□□ -1.18
TPM3-223ENST00000611659 ZCCHC13Q8WW36 166 aaKnown RBP7.67□□□□□ -1.18
TPM3-223ENST00000611659 SPRR4Q96PI1 79 aa7.67□□□□□ -1.18
TPM3-223ENST00000611659 KRTAP4-16G5E9R7 235 aaPredicted RBP7.66□□□□□ -1.18
TPM3-223ENST00000611659 LINC01556Q5JQF7 62 aa7.66□□□□□ -1.18
TPM3-223ENST00000611659 FLNBO75369 2602 aaKnown RBP7.66□□□□□ -1.18
TPM3-223ENST00000611659 F8WDY8 70 aa7.65□□□□□ -1.18
TPM3-223ENST00000611659 Q1T7F1 81 aa7.65□□□□□ -1.18
TPM3-223ENST00000611659 H3BNG1 76 aa7.65□□□□□ -1.18
TPM3-223ENST00000611659 LINC00476Q8WZB0 136 aa7.65□□□□□ -1.18
TPM3-223ENST00000611659 TENM3Q9P273 2699 aa7.65□□□□□ -1.19
TPM3-223ENST00000611659 TRAV22A0A0B4J277 110 aa7.65□□□□□ -1.19
TPM3-223ENST00000611659 MAST4O15021 2626 aa7.65□□□□□ -1.19
TPM3-223ENST00000611659 NOTCH1P46531 2555 aa7.64□□□□□ -1.19
TPM3-223ENST00000611659 STAB1Q9NY15 2570 aa7.64□□□□□ -1.19
TPM3-223ENST00000611659 CASC10Q5T4H9 136 aa7.64□□□□□ -1.19
TPM3-223ENST00000611659 DEFB131BA0A096LNP1 70 aa7.64□□□□□ -1.19
TPM3-223ENST00000611659 MRPL55Q7Z7F7 128 aaKnown RBP7.64□□□□□ -1.19
TPM3-223ENST00000611659 SPRR1AP35321 89 aa7.63□□□□□ -1.19
TPM3-223ENST00000611659 BAHCC1Q9P281 2608 aa7.63□□□□□ -1.19
TPM3-223ENST00000611659 SEC61GP60059 68 aa7.63□□□□□ -1.19
TPM3-223ENST00000611659 KRTAP7-1Q8IUC3 87 aa7.63□□□□□ -1.19
TPM3-223ENST00000611659 LINC00208Q96KT6 92 aa7.63□□□□□ -1.19
TPM3-223ENST00000611659 MP68P56378 58 aa7.62□□□□□ -1.19
TPM3-223ENST00000611659 RPL37AP61513 92 aaKnown RBP7.62□□□□□ -1.19
TPM3-223ENST00000611659 FBN1P35555 2871 aaKnown RBP7.62□□□□□ -1.19
TPM3-223ENST00000611659 A0A087WSZ3 146 aa7.62□□□□□ -1.19
TPM3-223ENST00000611659 PRR15Q8IV56 129 aa7.61□□□□□ -1.19
TPM3-223ENST00000611659 A8MUN3 132 aa7.61□□□□□ -1.19
TPM3-223ENST00000611659 TLX1NBP0CAT3 122 aa7.61□□□□□ -1.19
TPM3-223ENST00000611659 IGFL1Q6UW32 110 aa7.61□□□□□ -1.19
TPM3-223ENST00000611659 PLA2G2DQ9UNK4 145 aa7.61□□□□□ -1.19
TPM3-223ENST00000611659 REG3GQ6UW15 175 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms