RNA–Protein interactions for RNA: ENST00000605467.1

PBX1-220, Transcript of PBX homeobox 1, humanhuman

Gene PBX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-220ENST00000605467 MED9Q9NWA0 146 aa1.8□□□□□ -2.12
PBX1-220ENST00000605467 PKIGQ9Y2B9 76 aa1.8□□□□□ -2.12
PBX1-220ENST00000605467 HMCN2Q8NDA2 5059 aa1.79□□□□□ -2.12
PBX1-220ENST00000605467 IGKV3OR2-268A0A0C4DH90 116 aa1.79□□□□□ -2.12
PBX1-220ENST00000605467 F2Z2F3 143 aa1.79□□□□□ -2.12
PBX1-220ENST00000605467 M0QY20 66 aa1.79□□□□□ -2.12
PBX1-220ENST00000605467 IGLC6P0CF74 106 aa1.79□□□□□ -2.12
PBX1-220ENST00000605467 BCL2P10415 239 aa1.79□□□□□ -2.12
PBX1-220ENST00000605467 RAB5CP51148 216 aa1.79□□□□□ -2.12
PBX1-220ENST00000605467 BTF3L4Q96K17 158 aa1.79□□□□□ -2.12
PBX1-220ENST00000605467 NIT2Q9NQR4 276 aa1.79□□□□□ -2.12
PBX1-220ENST00000605467 TP73-AS1Q9UF72 201 aa1.79□□□□□ -2.12
PBX1-220ENST00000605467 TRAV1-1A0A0B4J248 108 aa1.78□□□□□ -2.12
PBX1-220ENST00000605467 TRAV26-2A0A0B4J265 109 aa1.78□□□□□ -2.12
PBX1-220ENST00000605467 TRBV10-2A0A0K0K1G8 114 aa1.78□□□□□ -2.12
PBX1-220ENST00000605467 CNBPP62633 177 aaKnown RBP1.78□□□□□ -2.12
PBX1-220ENST00000605467 TEX261Q6UWH6 196 aa1.78□□□□□ -2.12
PBX1-220ENST00000605467 C9orf163Q8N9P6 203 aa1.78□□□□□ -2.12
PBX1-220ENST00000605467 RNASE7Q9H1E1 156 aaKnown RBP1.78□□□□□ -2.12
PBX1-220ENST00000605467 UBR4Q5T4S7 5183 aa1.78□□□□□ -2.12
PBX1-220ENST00000605467 TNXBP22105 4242 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.77□□□□□ -2.13
PBX1-220ENST00000605467 GVQW2A0A096LPI5 108 aaPredicted RBP1.77□□□□□ -2.13
PBX1-220ENST00000605467 IGKV2-29A2NJV5 120 aaPredicted RBP1.77□□□□□ -2.13
PBX1-220ENST00000605467 NCR2O95944 276 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 ZNF25P17030 456 aaPredicted RBP1.77□□□□□ -2.13
PBX1-220ENST00000605467 HIST1H2BOP23527 126 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 FCER1GP30273 86 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 HIST1H2BBP33778 126 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 HIST1H2BDP58876 126 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 HIST1H2BCP62807 126 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 COX6A2Q02221 97 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 HIST2H2BEQ16778 126 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.77□□□□□ -2.13
PBX1-220ENST00000605467 KRTAP26-1Q6PEX3 210 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 AKAP14Q86UN6 197 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 COA5Q86WW8 74 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 TCTE3Q8IZS6 198 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 OR5A1Q8NGJ0 315 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 HIST1H2BHQ93079 126 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 RPL39LQ96EH5 51 aaKnown RBP1.77□□□□□ -2.13
PBX1-220ENST00000605467 CARD19Q96LW7 228 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 HIST1H2BNQ99877 126 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 HIST1H2BMQ99879 126 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 CNFNQ9BYD5 112 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 LINC00474Q9P2X8 69 aa1.77□□□□□ -2.13
PBX1-220ENST00000605467 A0A096LNI7 61 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 IGHV1-58A0A0C4DH39 117 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 A0A1B0GUT8 65 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 C7orf77A4D0Y5 90 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 HIGD1CA8MV81 97 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 I3L3M4 83 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 CCL25O15444 150 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 KRTAP10-4P60372 401 aaPredicted RBP1.76□□□□□ -2.13
PBX1-220ENST00000605467 CIRBPQ14011 172 aaKnown RBP1.76□□□□□ -2.13
PBX1-220ENST00000605467 ALKAL2Q6UX46 152 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 C9orf62Q8N4C0 152 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 SMIM7Q9BQ49 75 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 ST20Q9HBF5 79 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 TMEM242Q9NWH2 141 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 PLAC8Q9NZF1 115 aa1.76□□□□□ -2.13
PBX1-220ENST00000605467 TRBV6-5A0A0K0K1A5 114 aa1.75□□□□□ -2.13
PBX1-220ENST00000605467 LOC107984640A0A0U1RRK4 108 aa1.75□□□□□ -2.13
PBX1-220ENST00000605467 LINC00959A0A1B0GUT2 108 aa1.75□□□□□ -2.13
PBX1-220ENST00000605467 ZNF727A8MUV8 499 aa1.75□□□□□ -2.13
PBX1-220ENST00000605467 PPP1R17O96001 155 aa1.75□□□□□ -2.13
PBX1-220ENST00000605467 FXYD2P54710 66 aa1.75□□□□□ -2.13
PBX1-220ENST00000605467 ADIRFQ15847 76 aa1.75□□□□□ -2.13
PBX1-220ENST00000605467 C7orf65Q6ZTY9 151 aa1.75□□□□□ -2.13
PBX1-220ENST00000605467 ANKRD29Q8N6D5 301 aa1.75□□□□□ -2.13
PBX1-220ENST00000605467 TMEM191AQ9H0A3 160 aa1.75□□□□□ -2.13
PBX1-220ENST00000605467 TRAV13-1A0A0B4J241 112 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 TRBV27A0A0K0K1C4 114 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 FAM236DA0A1B0GTK5 79 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 C1orf196B1AJZ1 125 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 F8W036 122 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 MT-ND6P03923 174 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 S100A8P05109 93 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 FAM236CP0DP71 79 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 FOXA3P55318 350 aaPredicted RBP1.74□□□□□ -2.13
PBX1-220ENST00000605467 LRP2P98164 4655 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 SPAG11BQ08648 103 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 SPINK6Q6UWN8 80 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 Q6ZUT4 128 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 TSKUQ8WUA8 353 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 TOMM6Q96B49 74 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 LINC00526Q96FQ7 95 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 OSTCQ9NRP0 149 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 CDC42SE2Q9NRR3 84 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 NAT8BQ9UHF3 227 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 RNF213Q63HN8 5207 aa1.74□□□□□ -2.13
PBX1-220ENST00000605467 NDUFA1O15239 70 aa1.73□□□□□ -2.13
PBX1-220ENST00000605467 MT1HL1P0DM35 61 aa1.73□□□□□ -2.13
PBX1-220ENST00000605467 CKS2P33552 79 aa1.73□□□□□ -2.13
PBX1-220ENST00000605467 IFI27P40305 119 aaPredicted RBP1.73□□□□□ -2.13
PBX1-220ENST00000605467 HBBP68871 147 aa1.73□□□□□ -2.13
PBX1-220ENST00000605467 NDUFA5Q16718 116 aa1.73□□□□□ -2.13
PBX1-220ENST00000605467 C5orf38Q86SI9 138 aa1.73□□□□□ -2.13
PBX1-220ENST00000605467 NUP35Q8NFH5 326 aa1.73□□□□□ -2.13
PBX1-220ENST00000605467 SMIM2Q9BVW6 85 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms