RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
TUBE1-208ENST00000604743 SMCR5Q8TEV8 140 aa8.47□□□□□ -1.05
TUBE1-208ENST00000604743 LITAFQ99732 161 aa8.47□□□□□ -1.05
TUBE1-208ENST00000604743 KRTAP4-16G5E9R7 235 aaPredicted RBP8.46□□□□□ -1.06
TUBE1-208ENST00000604743 TIMM17BO60830 172 aa8.46□□□□□ -1.06
TUBE1-208ENST00000604743 JOSD1Q15040 202 aaPredicted RBP8.46□□□□□ -1.06
TUBE1-208ENST00000604743 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.06
TUBE1-208ENST00000604743 SCGB1D4Q6XE38 83 aa8.45□□□□□ -1.06
TUBE1-208ENST00000604743 SPRR4Q96PI1 79 aa8.45□□□□□ -1.06
TUBE1-208ENST00000604743 TRAV23DV6A0A075B6W5 121 aa8.44□□□□□ -1.06
TUBE1-208ENST00000604743 B5MCH6 92 aa8.44□□□□□ -1.06
TUBE1-208ENST00000604743 IGLV6-57P01721 117 aa8.44□□□□□ -1.06
TUBE1-208ENST00000604743 PRR4Q16378 134 aa8.44□□□□□ -1.06
TUBE1-208ENST00000604743 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
TUBE1-208ENST00000604743 OR13C6PQ8NH95 151 aa8.44□□□□□ -1.06
TUBE1-208ENST00000604743 PPDPFQ9H3Y8 114 aa8.44□□□□□ -1.06
TUBE1-208ENST00000604743 ZNF706Q9Y5V0 76 aaPredicted RBP8.44□□□□□ -1.06
TUBE1-208ENST00000604743 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
TUBE1-208ENST00000604743 LPAP08519 4548 aa8.42□□□□□ -1.06
TUBE1-208ENST00000604743 PCP2Q8IVA1 136 aa8.42□□□□□ -1.06
TUBE1-208ENST00000604743 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
TUBE1-208ENST00000604743 VAMP8Q9BV40 100 aa8.42□□□□□ -1.06
TUBE1-208ENST00000604743 ERC2-IT1O76042 136 aa8.41□□□□□ -1.06
TUBE1-208ENST00000604743 ZNF73O43830 326 aaPredicted RBP8.4□□□□□ -1.06
TUBE1-208ENST00000604743 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.06
TUBE1-208ENST00000604743 Q6ZRX8 168 aa8.4□□□□□ -1.06
TUBE1-208ENST00000604743 Q9BRP9 147 aa8.4□□□□□ -1.06
TUBE1-208ENST00000604743 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
TUBE1-208ENST00000604743 HINT1P49773 126 aaPredicted RBP8.38□□□□□ -1.07
TUBE1-208ENST00000604743 SPATA45Q537H7 98 aa8.37□□□□□ -1.07
TUBE1-208ENST00000604743 PYY3Q5JQD4 70 aa8.37□□□□□ -1.07
TUBE1-208ENST00000604743 PAM16Q9Y3D7 125 aa8.37□□□□□ -1.07
TUBE1-208ENST00000604743 CBY1Q9Y3M2 126 aa8.37□□□□□ -1.07
TUBE1-208ENST00000604743 SMIM6P0DI80 62 aa8.36□□□□□ -1.07
TUBE1-208ENST00000604743 LINC00518Q8N0U6 118 aa8.36□□□□□ -1.07
TUBE1-208ENST00000604743 COPS9Q8WXC6 57 aa8.36□□□□□ -1.07
TUBE1-208ENST00000604743 RETNLBQ9BQ08 111 aa8.36□□□□□ -1.07
TUBE1-208ENST00000604743 MUSTN1Q8IVN3 82 aa8.35□□□□□ -1.07
TUBE1-208ENST00000604743 IGLV9-49A0A0B4J1Y8 123 aa8.34□□□□□ -1.07
TUBE1-208ENST00000604743 IFITM1P13164 125 aa8.34□□□□□ -1.07
TUBE1-208ENST00000604743 RNF213Q63HN8 5207 aa8.34□□□□□ -1.08
TUBE1-208ENST00000604743 COX8AP10176 69 aa8.33□□□□□ -1.08
TUBE1-208ENST00000604743 LINC00483Q53H64 154 aa8.33□□□□□ -1.08
TUBE1-208ENST00000604743 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
TUBE1-208ENST00000604743 ST20-AS1Q8NBB2 130 aa8.33□□□□□ -1.08
TUBE1-208ENST00000604743 Q8NBF4 154 aa8.33□□□□□ -1.08
TUBE1-208ENST00000604743 Q6ZVH6 145 aa8.32□□□□□ -1.08
TUBE1-208ENST00000604743 A6NDN8 102 aa8.31□□□□□ -1.08
TUBE1-208ENST00000604743 DLEU1O43261 78 aa8.31□□□□□ -1.08
TUBE1-208ENST00000604743 MOBPQ13875 183 aa8.31□□□□□ -1.08
TUBE1-208ENST00000604743 C6orf99Q4VX62 202 aa8.31□□□□□ -1.08
TUBE1-208ENST00000604743 SLC25A34Q6PIV7 304 aa8.31□□□□□ -1.08
TUBE1-208ENST00000604743 LOC105371267A0A1B0GV96 52 aa8.3□□□□□ -1.08
TUBE1-208ENST00000604743 LCE2BO14633 110 aa8.3□□□□□ -1.08
TUBE1-208ENST00000604743 COX7BP24311 80 aa8.3□□□□□ -1.08
TUBE1-208ENST00000604743 SPAG11AQ6PDA7 123 aa8.3□□□□□ -1.08
TUBE1-208ENST00000604743 C9orf153Q5TBE3 101 aa8.28□□□□□ -1.08
TUBE1-208ENST00000604743 C14orf144Q96I85 54 aa8.28□□□□□ -1.08
TUBE1-208ENST00000604743 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
TUBE1-208ENST00000604743 ELOF1P60002 83 aaKnown RBP8.27□□□□□ -1.09
TUBE1-208ENST00000604743 TRAV13-2A0A0B4J235 113 aa8.25□□□□□ -1.09
TUBE1-208ENST00000604743 CTAG1AP78358 180 aa8.25□□□□□ -1.09
TUBE1-208ENST00000604743 SSBP3-AS1Q7Z2R9 100 aa8.25□□□□□ -1.09
TUBE1-208ENST00000604743 HIGD1BQ9P298 99 aa8.25□□□□□ -1.09
TUBE1-208ENST00000604743 UQCR10Q9UDW1 63 aa8.25□□□□□ -1.09
TUBE1-208ENST00000604743 DEFB105AQ8NG35 78 aa8.24□□□□□ -1.09
TUBE1-208ENST00000604743 HIST1H4GQ99525 98 aa8.24□□□□□ -1.09
TUBE1-208ENST00000604743 IGLV7-46A0A075B6I9 117 aa8.23□□□□□ -1.09
TUBE1-208ENST00000604743 SPINK1P00995 79 aa8.23□□□□□ -1.09
TUBE1-208ENST00000604743 TAL2Q16559 108 aa8.23□□□□□ -1.09
TUBE1-208ENST00000604743 C12orf57Q99622 126 aa8.23□□□□□ -1.09
TUBE1-208ENST00000604743 TRBV7-6A0A0J9YX20 115 aa8.22□□□□□ -1.09
TUBE1-208ENST00000604743 A0A1B0GWB2 263 aa8.22□□□□□ -1.09
TUBE1-208ENST00000604743 A4D1N5 150 aa8.22□□□□□ -1.09
TUBE1-208ENST00000604743 SMIM11BQ8TCY0 68 aa8.22□□□□□ -1.09
TUBE1-208ENST00000604743 TSTD3H0UI37 97 aa8.21□□□□□ -1.1
TUBE1-208ENST00000604743 SPRR1BP22528 89 aa8.2□□□□□ -1.1
TUBE1-208ENST00000604743 LAMTOR3Q9UHA4 124 aa8.2□□□□□ -1.1
TUBE1-208ENST00000604743 Q1RN00 199 aa8.19□□□□□ -1.1
TUBE1-208ENST00000604743 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
TUBE1-208ENST00000604743 A6NJY4 79 aa8.18□□□□□ -1.1
TUBE1-208ENST00000604743 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
TUBE1-208ENST00000604743 TEX49A0A1B0GTD5 131 aa8.17□□□□□ -1.1
TUBE1-208ENST00000604743 HRCT1Q6UXD1 115 aa8.17□□□□□ -1.1
TUBE1-208ENST00000604743 C2orf91Q6ZV80 131 aa8.17□□□□□ -1.1
TUBE1-208ENST00000604743 HSD52Q0P140 79 aa8.16□□□□□ -1.1
TUBE1-208ENST00000604743 VAMP3Q15836 100 aa8.16□□□□□ -1.1
TUBE1-208ENST00000604743 PRO1933Q9H354 126 aa8.16□□□□□ -1.1
TUBE1-208ENST00000604743 TPRXLQ17RH7 258 aa8.15□□□□□ -1.1
TUBE1-208ENST00000604743 FP248Q71RG6 208 aaPredicted RBP8.15□□□□□ -1.1
TUBE1-208ENST00000604743 Q8N377 158 aa8.15□□□□□ -1.1
TUBE1-208ENST00000604743 NHP2Q9NX24 153 aaKnown RBP8.15□□□□□ -1.1
TUBE1-208ENST00000604743 SLC25A20O43772 301 aa8.14□□□□□ -1.11
TUBE1-208ENST00000604743 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
TUBE1-208ENST00000604743 LINC01547P58512 204 aaPredicted RBP8.13□□□□□ -1.11
TUBE1-208ENST00000604743 CEND1Q8N111 149 aa8.13□□□□□ -1.11
TUBE1-208ENST00000604743 IGLV5-48A0A075B6I7 105 aa8.11□□□□□ -1.11
TUBE1-208ENST00000604743 H7C2G1 150 aa8.11□□□□□ -1.11
TUBE1-208ENST00000604743 LINC00575Q6W349 94 aa8.11□□□□□ -1.11
TUBE1-208ENST00000604743 SMIM29Q86T20 159 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms