RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 LCE2AQ5TA79 106 aaPredicted RBP12.1□□□□□ -0.47
PPFIA3-209ENST00000602783 EIF4EBP3O60516 100 aaPredicted RBP12.09□□□□□ -0.47
PPFIA3-209ENST00000602783 ERC2-IT1O76042 136 aa12.09□□□□□ -0.47
PPFIA3-209ENST00000602783 IGLV6-57P01721 117 aa12.09□□□□□ -0.47
PPFIA3-209ENST00000602783 Q8NBF4 154 aa12.09□□□□□ -0.47
PPFIA3-209ENST00000602783 GAGE2AQ6NT46 116 aa12.08□□□□□ -0.48
PPFIA3-209ENST00000602783 Q6ZRX8 168 aa12.08□□□□□ -0.48
PPFIA3-209ENST00000602783 Q9BRP9 147 aa12.08□□□□□ -0.48
PPFIA3-209ENST00000602783 TRAV23DV6A0A075B6W5 121 aa12.07□□□□□ -0.48
PPFIA3-209ENST00000602783 LINC01545Q5VT33 79 aa12.07□□□□□ -0.48
PPFIA3-209ENST00000602783 KRTAP9-2Q9BYQ4 174 aa12.06□□□□□ -0.48
PPFIA3-209ENST00000602783 PET117Q6UWS5 81 aa12.04□□□□□ -0.48
PPFIA3-209ENST00000602783 FP248Q71RG6 208 aaPredicted RBP12.04□□□□□ -0.48
PPFIA3-209ENST00000602783 LITAFQ99732 161 aa12.03□□□□□ -0.48
PPFIA3-209ENST00000602783 ZNF73O43830 326 aaPredicted RBP12.02□□□□□ -0.49
PPFIA3-209ENST00000602783 MOBPQ13875 183 aa12.02□□□□□ -0.49
PPFIA3-209ENST00000602783 IGLV9-49A0A0B4J1Y8 123 aa12.01□□□□□ -0.49
PPFIA3-209ENST00000602783 LINC00308Q8TCZ7 52 aa12.01□□□□□ -0.49
PPFIA3-209ENST00000602783 ZNF815PA8K554 130 aa12□□□□□ -0.49
PPFIA3-209ENST00000602783 TIMM17BO60830 172 aa12□□□□□ -0.49
PPFIA3-209ENST00000602783 C3orf79P0CE67 100 aa12□□□□□ -0.49
PPFIA3-209ENST00000602783 JOSD1Q15040 202 aaPredicted RBP12□□□□□ -0.49
PPFIA3-209ENST00000602783 SPINK1P00995 79 aa11.99□□□□□ -0.49
PPFIA3-209ENST00000602783 TTTY13Q9BZ97 58 aa11.99□□□□□ -0.49
PPFIA3-209ENST00000602783 SPANXCQ9NY87 97 aa11.99□□□□□ -0.49
PPFIA3-209ENST00000602783 COA6Q5JTJ3 125 aaKnown RBP11.97□□□□□ -0.49
PPFIA3-209ENST00000602783 KRTDAPP60985 99 aa11.96□□□□□ -0.49
PPFIA3-209ENST00000602783 KRTAP13-3Q3SY46 172 aa11.96□□□□□ -0.49
PPFIA3-209ENST00000602783 CBY1Q9Y3M2 126 aa11.96□□□□□ -0.49
PPFIA3-209ENST00000602783 OR13C6PQ8NH95 151 aa11.95□□□□□ -0.5
PPFIA3-209ENST00000602783 SSBP3-AS1Q7Z2R9 100 aa11.94□□□□□ -0.5
PPFIA3-209ENST00000602783 HINT1P49773 126 aaPredicted RBP11.93□□□□□ -0.5
PPFIA3-209ENST00000602783 ST20-AS1Q8NBB2 130 aa11.93□□□□□ -0.5
PPFIA3-209ENST00000602783 C9orf153Q5TBE3 101 aa11.92□□□□□ -0.5
PPFIA3-209ENST00000602783 SPANXDQ9BXN6 97 aa11.92□□□□□ -0.5
PPFIA3-209ENST00000602783 RPS29P62273 56 aaKnown RBP11.9□□□□□ -0.5
PPFIA3-209ENST00000602783 C20orf202A1L168 122 aa11.89□□□□□ -0.51
PPFIA3-209ENST00000602783 ASB16-AS1Q495Z4 193 aa11.89□□□□□ -0.51
PPFIA3-209ENST00000602783 ANKRD39Q53RE8 183 aa11.88□□□□□ -0.51
PPFIA3-209ENST00000602783 SCGB1D4Q6XE38 83 aa11.88□□□□□ -0.51
PPFIA3-209ENST00000602783 Q8N377 158 aa11.88□□□□□ -0.51
PPFIA3-209ENST00000602783 C5orf52A6NGY3 159 aa11.87□□□□□ -0.51
PPFIA3-209ENST00000602783 ATOH7Q8N100 152 aa11.86□□□□□ -0.51
PPFIA3-209ENST00000602783 LINC00518Q8N0U6 118 aa11.85□□□□□ -0.51
PPFIA3-209ENST00000602783 DHRS4-AS1Q9P1J3 65 aa11.85□□□□□ -0.51
PPFIA3-209ENST00000602783 ELOF1P60002 83 aaKnown RBP11.84□□□□□ -0.51
PPFIA3-209ENST00000602783 SLC25A20O43772 301 aa11.83□□□□□ -0.52
PPFIA3-209ENST00000602783 COX7BP24311 80 aa11.83□□□□□ -0.52
PPFIA3-209ENST00000602783 SEC61BP60468 96 aaKnown RBP11.83□□□□□ -0.52
PPFIA3-209ENST00000602783 C6orf99Q4VX62 202 aa11.83□□□□□ -0.52
PPFIA3-209ENST00000602783 SPRR1BP22528 89 aa11.82□□□□□ -0.52
PPFIA3-209ENST00000602783 KRTAP4-1Q9BYQ7 146 aa11.81□□□□□ -0.52
PPFIA3-209ENST00000602783 PCP2Q8IVA1 136 aa11.8□□□□□ -0.52
PPFIA3-209ENST00000602783 COPS9Q8WXC6 57 aa11.8□□□□□ -0.52
PPFIA3-209ENST00000602783 IFITM1P13164 125 aa11.79□□□□□ -0.52
PPFIA3-209ENST00000602783 SLC25A34Q6PIV7 304 aa11.79□□□□□ -0.52
PPFIA3-209ENST00000602783 AKR1D1P51857 326 aa11.77□□□□□ -0.53
PPFIA3-209ENST00000602783 LINC01547P58512 204 aaPredicted RBP11.76□□□□□ -0.53
PPFIA3-209ENST00000602783 Q6ZVH6 145 aa11.76□□□□□ -0.53
PPFIA3-209ENST00000602783 LAMTOR3Q9UHA4 124 aa11.76□□□□□ -0.53
PPFIA3-209ENST00000602783 A6NDN8 102 aa11.75□□□□□ -0.53
PPFIA3-209ENST00000602783 MUSTN1Q8IVN3 82 aa11.75□□□□□ -0.53
PPFIA3-209ENST00000602783 TRBV7-6A0A0J9YX20 115 aa11.74□□□□□ -0.53
PPFIA3-209ENST00000602783 KRTAP9-6A0A140TA67 174 aa11.73□□□□□ -0.53
PPFIA3-209ENST00000602783 TAL2Q16559 108 aa11.73□□□□□ -0.53
PPFIA3-209ENST00000602783 HRCT1Q6UXD1 115 aa11.73□□□□□ -0.53
PPFIA3-209ENST00000602783 DEFB105AQ8NG35 78 aa11.73□□□□□ -0.53
PPFIA3-209ENST00000602783 A0A1B0GWB2 263 aa11.72□□□□□ -0.53
PPFIA3-209ENST00000602783 Q1RN00 199 aa11.72□□□□□ -0.53
PPFIA3-209ENST00000602783 XP32Q5T750 250 aa11.72□□□□□ -0.53
PPFIA3-209ENST00000602783 HIST3H2BBQ8N257 126 aa11.72□□□□□ -0.53
PPFIA3-209ENST00000602783 SNRPEP62304 92 aaKnown RBP11.71□□□□□ -0.53
PPFIA3-209ENST00000602783 LIMD2Q9BT23 127 aa11.71□□□□□ -0.53
PPFIA3-209ENST00000602783 HIST1H2BLQ99880 126 aa11.7□□□□□ -0.54
PPFIA3-209ENST00000602783 TEX49A0A1B0GTD5 131 aa11.69□□□□□ -0.54
PPFIA3-209ENST00000602783 S100A2P29034 98 aa11.68□□□□□ -0.54
PPFIA3-209ENST00000602783 TRAV13-2A0A0B4J235 113 aa11.66□□□□□ -0.54
PPFIA3-209ENST00000602783 SMIM29Q86T20 159 aa11.65□□□□□ -0.54
PPFIA3-209ENST00000602783 SMIM11BQ8TCY0 68 aa11.65□□□□□ -0.54
PPFIA3-209ENST00000602783 PRO1933Q9H354 126 aa11.65□□□□□ -0.54
PPFIA3-209ENST00000602783 IGLV5-48A0A075B6I7 105 aa11.64□□□□□ -0.55
PPFIA3-209ENST00000602783 A4D1N5 150 aa11.63□□□□□ -0.55
PPFIA3-209ENST00000602783 HSBP1L1C9JCN9 74 aa11.63□□□□□ -0.55
PPFIA3-209ENST00000602783 CD164Q04900 197 aa11.62□□□□□ -0.55
PPFIA3-209ENST00000602783 NHP2Q9NX24 153 aaKnown RBP11.61□□□□□ -0.55
PPFIA3-209ENST00000602783 H7C2G1 150 aa11.59□□□□□ -0.55
PPFIA3-209ENST00000602783 S100A6P06703 90 aa11.59□□□□□ -0.55
PPFIA3-209ENST00000602783 C9orf92A6NGG3 77 aa11.57□□□□□ -0.56
PPFIA3-209ENST00000602783 TMA7Q9Y2S6 64 aaKnown RBP11.57□□□□□ -0.56
PPFIA3-209ENST00000602783 A0A0G2JQZ4 141 aa11.56□□□□□ -0.56
PPFIA3-209ENST00000602783 PCOTHQ58A44 107 aa11.55□□□□□ -0.56
PPFIA3-209ENST00000602783 LCE2CQ5TA81 110 aa11.54□□□□□ -0.56
PPFIA3-209ENST00000602783 VAMP3Q15836 100 aa11.53□□□□□ -0.56
PPFIA3-209ENST00000602783 LCE2DQ5TA82 110 aaPredicted RBP11.53□□□□□ -0.56
PPFIA3-209ENST00000602783 Q5XG85 94 aa11.53□□□□□ -0.56
PPFIA3-209ENST00000602783 IGLV8-61A0A075B6I0 122 aa11.51□□□□□ -0.57
PPFIA3-209ENST00000602783 SCGB1D1O95968 90 aa11.51□□□□□ -0.57
PPFIA3-209ENST00000602783 LINC00575Q6W349 94 aa11.51□□□□□ -0.57
PPFIA3-209ENST00000602783 C1orf195Q5TG92 126 aa11.49□□□□□ -0.57
PPFIA3-209ENST00000602783 C12orf57Q99622 126 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms