RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 SPRR4Q96PI1 79 aa1.01□□□□□ -2.25
SGMS1-207ENST00000602619 FAM103A1Q9BTL3 118 aaKnown RBP1.01□□□□□ -2.25
SGMS1-207ENST00000602619 U3KQA8 63 aa1.01□□□□□ -2.25
SGMS1-207ENST00000602619 C5orf42Q9H799 3197 aa1.01□□□□□ -2.25
SGMS1-207ENST00000602619 TRIOO75962 3097 aa1.01□□□□□ -2.25
SGMS1-207ENST00000602619 WDR87Q6ZQQ6 2873 aa1.01□□□□□ -2.25
SGMS1-207ENST00000602619 USP34Q70CQ2 3546 aa1.01□□□□□ -2.25
SGMS1-207ENST00000602619 FRYLO94915 3013 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 FRYQ5TBA9 3013 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 GOLGA4Q13439 2230 aaKnown RBP1□□□□□ -2.25
SGMS1-207ENST00000602619 ESPL1Q14674 2120 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 A0A087WVE0 104 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 MYMXA0A1B0GTQ4 84 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 A0A1B0GUT8 65 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 PLGLAQ15195 96 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 C10orf113Q5VZT2 155 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 Q6JHZ5 121 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 FDCSPQ8NFU4 85 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 TMEM167AQ8TBQ9 72 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 SZT2Q5T011 3432 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 FBN3Q75N90 2809 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 REV3LO60673 3130 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 PRUNE2Q8WUY3 3088 aa1□□□□□ -2.25
SGMS1-207ENST00000602619 KNL1Q8NG31 2342 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 MYO7AQ13402 2215 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 LINC01549A6NIU2 74 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 DEFB108AA8MXU0 73 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 H3BUT2 72 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 K7EIL1 84 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 K7EMI3 77 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 TNRC18O15417 2968 aaPredicted RBP0.99□□□□□ -2.25
SGMS1-207ENST00000602619 SMIM13P0DJ93 91 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 HAMPP81172 84 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 KLK9Q2XQG4 91 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 RPL39P5Q59GN2 51 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 SPINK9Q5DT21 86 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 UBE2DNLQ8IWF7 75 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 CNFNQ9BYD5 112 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 LINC00472Q9H8W2 130 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 CDH23Q9H251 3354 aa0.99□□□□□ -2.25
SGMS1-207ENST00000602619 PRRC2CQ9Y520 2896 aaKnown RBP0.98□□□□□ -2.25
SGMS1-207ENST00000602619 CNTRLQ7Z7A1 2325 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 WDFY3Q8IZQ1 3526 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 MYO15AQ9UKN7 3530 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 G3V318 75 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 H0Y9P7 68 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 I3L2K1 104 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 SPINK4O60575 86 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 PLNP26678 52 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 FCER1GP30273 86 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 IFI27P40305 119 aaPredicted RBP0.98□□□□□ -2.25
SGMS1-207ENST00000602619 WT1-ASQ06250 92 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 GAFA1Q96PS6 74 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 KAAG1Q9UBP8 84 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 FREM2Q5SZK8 3169 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 SPTBP11277 2137 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 VPS13AQ96RL7 3174 aa0.98□□□□□ -2.25
SGMS1-207ENST00000602619 FLG2Q5D862 2391 aaPredicted RBP0.97□□□□□ -2.25
SGMS1-207ENST00000602619 NCOA6Q14686 2063 aaPredicted RBP0.97□□□□□ -2.25
SGMS1-207ENST00000602619 K7EIM0 57 aa0.97□□□□□ -2.25
SGMS1-207ENST00000602619 CRIP1P50238 77 aa0.97□□□□□ -2.25
SGMS1-207ENST00000602619 SPATA8Q6RVD6 105 aa0.97□□□□□ -2.25
SGMS1-207ENST00000602619 DMDP11532 3685 aa0.97□□□□□ -2.25
SGMS1-207ENST00000602619 FAM186AA6NE01 2351 aa0.97□□□□□ -2.25
SGMS1-207ENST00000602619 ADGRG4Q8IZF6 3080 aa0.97□□□□□ -2.25
SGMS1-207ENST00000602619 SPEGQ15772 3267 aa0.97□□□□□ -2.25
SGMS1-207ENST00000602619 CACNA1EQ15878 2313 aa0.97□□□□□ -2.25
SGMS1-207ENST00000602619 AHCTF1Q8WYP5 2266 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 USF3Q68DE3 2245 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 DSPP15924 2871 aaKnown RBP0.96□□□□□ -2.26
SGMS1-207ENST00000602619 M0R1W7 72 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 NDUFA3O95167 84 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 COX6B1P14854 86 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 MINOS1Q5TGZ0 78 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 LEAP2Q969E1 77 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 SMIM2Q9BVW6 85 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 UBE2D4Q9Y2X8 147 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 HILPDAQ9Y5L2 63 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 CFAP47Q6ZTR5 3102 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 ASXL3Q9C0F0 2248 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 EYSQ5T1H1 3165 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 KALRNO60229 2985 aa0.96□□□□□ -2.26
SGMS1-207ENST00000602619 SMG1Q96Q15 3661 aaKnown RBP0.95□□□□□ -2.26
SGMS1-207ENST00000602619 DMXL2Q8TDJ6 3036 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 BSNQ9UPA5 3926 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 TRAV21A0A0B4J279 112 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 POLR2KP53803 58 aaKnown RBP0.95□□□□□ -2.26
SGMS1-207ENST00000602619 ATXN8Q156A1 80 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 DEFB121Q5J5C9 76 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 ATP5EP2Q5VTU8 51 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 DEFB108BQ8NET1 73 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 PRO3102Q9H379 93 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 ZZEF1O43149 2961 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 ABCA1O95477 2261 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 DOCK11Q5JSL3 2073 aa0.95□□□□□ -2.26
SGMS1-207ENST00000602619 WDFY4Q6ZS81 3184 aa0.94□□□□□ -2.26
SGMS1-207ENST00000602619 SPENQ96T58 3664 aaKnown RBP0.94□□□□□ -2.26
SGMS1-207ENST00000602619 CELSR3Q9NYQ7 3312 aa0.94□□□□□ -2.26
SGMS1-207ENST00000602619 AKAP9Q99996 3911 aa0.94□□□□□ -2.26
SGMS1-207ENST00000602619 MYO7BQ6PIF6 2116 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms