RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 Q8NBF4 154 aa14.95□□□□□ -0.02
PNKP-216ENST00000601816 TRAV23DV6A0A075B6W5 121 aa14.94□□□□□ -0.02
PNKP-216ENST00000601816 Q9BRP9 147 aa14.94□□□□□ -0.02
PNKP-216ENST00000601816 TPRXLQ17RH7 258 aa14.91□□□□□ -0.02
PNKP-216ENST00000601816 TIMM17BO60830 172 aa14.9□□□□□ -0.02
PNKP-216ENST00000601816 JOSD1Q15040 202 aaPredicted RBP14.9□□□□□ -0.02
PNKP-216ENST00000601816 LITAFQ99732 161 aa14.9□□□□□ -0.02
PNKP-216ENST00000601816 ZNF73O43830 326 aaPredicted RBP14.89□□□□□ -0.03
PNKP-216ENST00000601816 C3orf79P0CE67 100 aa14.89□□□□□ -0.03
PNKP-216ENST00000601816 LINC00308Q8TCZ7 52 aa14.89□□□□□ -0.03
PNKP-216ENST00000601816 CDIP1Q9H305 208 aa14.89□□□□□ -0.03
PNKP-216ENST00000601816 ZNF815PA8K554 130 aa14.88□□□□□ -0.03
PNKP-216ENST00000601816 CBY1Q9Y3M2 126 aa14.88□□□□□ -0.03
PNKP-216ENST00000601816 COA6Q5JTJ3 125 aaKnown RBP14.87□□□□□ -0.03
PNKP-216ENST00000601816 SPANXCQ9NY87 97 aa14.87□□□□□ -0.03
PNKP-216ENST00000601816 IGLV9-49A0A0B4J1Y8 123 aa14.86□□□□□ -0.03
PNKP-216ENST00000601816 MOBPQ13875 183 aa14.86□□□□□ -0.03
PNKP-216ENST00000601816 SPINK1P00995 79 aa14.85□□□□□ -0.03
PNKP-216ENST00000601816 KRTDAPP60985 99 aa14.85□□□□□ -0.03
PNKP-216ENST00000601816 HINT1P49773 126 aaPredicted RBP14.83□□□□□ -0.04
PNKP-216ENST00000601816 FP248Q71RG6 208 aaPredicted RBP14.83□□□□□ -0.04
PNKP-216ENST00000601816 OR13C6PQ8NH95 151 aa14.83□□□□□ -0.04
PNKP-216ENST00000601816 TTTY13Q9BZ97 58 aa14.83□□□□□ -0.04
PNKP-216ENST00000601816 SSBP3-AS1Q7Z2R9 100 aa14.82□□□□□ -0.04
PNKP-216ENST00000601816 MUC2Q02817 5179 aa14.81□□□□□ -0.04
PNKP-216ENST00000601816 A0A0U1RQV1 116 aa14.79□□□□□ -0.04
PNKP-216ENST00000601816 C20orf202A1L168 122 aa14.79□□□□□ -0.04
PNKP-216ENST00000601816 SPANXDQ9BXN6 97 aa14.78□□□□□ -0.04
PNKP-216ENST00000601816 ST20-AS1Q8NBB2 130 aa14.76□□□□□ -0.05
PNKP-216ENST00000601816 C5orf52A6NGY3 159 aa14.75□□□□□ -0.05
PNKP-216ENST00000601816 RPS29P62273 56 aaKnown RBP14.74□□□□□ -0.05
PNKP-216ENST00000601816 C9orf153Q5TBE3 101 aa14.74□□□□□ -0.05
PNKP-216ENST00000601816 SCGB1D4Q6XE38 83 aa14.74□□□□□ -0.05
PNKP-216ENST00000601816 LINC00518Q8N0U6 118 aa14.74□□□□□ -0.05
PNKP-216ENST00000601816 ANKRD39Q53RE8 183 aa14.72□□□□□ -0.05
PNKP-216ENST00000601816 MUC17Q685J3 4493 aa14.71□□□□□ -0.05
PNKP-216ENST00000601816 DHRS4-AS1Q9P1J3 65 aa14.71□□□□□ -0.05
PNKP-216ENST00000601816 ATOH7Q8N100 152 aa14.7□□□□□ -0.06
PNKP-216ENST00000601816 Q8N377 158 aa14.69□□□□□ -0.06
PNKP-216ENST00000601816 AKR1D1P51857 326 aa14.68□□□□□ -0.06
PNKP-216ENST00000601816 KRTAP13-3Q3SY46 172 aa14.68□□□□□ -0.06
PNKP-216ENST00000601816 COPS9Q8WXC6 57 aa14.68□□□□□ -0.06
PNKP-216ENST00000601816 COX7BP24311 80 aa14.67□□□□□ -0.06
PNKP-216ENST00000601816 C6orf99Q4VX62 202 aa14.67□□□□□ -0.06
PNKP-216ENST00000601816 ELOF1P60002 83 aaKnown RBP14.66□□□□□ -0.06
PNKP-216ENST00000601816 SLC25A20O43772 301 aa14.65□□□□□ -0.06
PNKP-216ENST00000601816 SPRR1BP22528 89 aa14.65□□□□□ -0.06
PNKP-216ENST00000601816 IFITM1P13164 125 aa14.64□□□□□ -0.07
PNKP-216ENST00000601816 SLC25A34Q6PIV7 304 aa14.64□□□□□ -0.07
PNKP-216ENST00000601816 Q6ZVH6 145 aa14.63□□□□□ -0.07
PNKP-216ENST00000601816 PCP2Q8IVA1 136 aa14.62□□□□□ -0.07
PNKP-216ENST00000601816 LAMTOR3Q9UHA4 124 aa14.59□□□□□ -0.07
PNKP-216ENST00000601816 A6NDN8 102 aa14.58□□□□□ -0.08
PNKP-216ENST00000601816 SNRPEP62304 92 aaKnown RBP14.58□□□□□ -0.08
PNKP-216ENST00000601816 MUSTN1Q8IVN3 82 aa14.58□□□□□ -0.08
PNKP-216ENST00000601816 TRBV7-6A0A0J9YX20 115 aa14.57□□□□□ -0.08
PNKP-216ENST00000601816 TAL2Q16559 108 aa14.56□□□□□ -0.08
PNKP-216ENST00000601816 A0A1B0GWB2 263 aa14.54□□□□□ -0.08
PNKP-216ENST00000601816 S100A2P29034 98 aa14.54□□□□□ -0.08
PNKP-216ENST00000601816 HIST3H2BBQ8N257 126 aa14.54□□□□□ -0.08
PNKP-216ENST00000601816 DEFB105AQ8NG35 78 aa14.54□□□□□ -0.08
PNKP-216ENST00000601816 HIST1H2BLQ99880 126 aa14.52□□□□□ -0.09
PNKP-216ENST00000601816 FAT4Q6V0I7 4981 aa14.51□□□□□ -0.09
PNKP-216ENST00000601816 LIMD2Q9BT23 127 aa14.51□□□□□ -0.09
PNKP-216ENST00000601816 TEX49A0A1B0GTD5 131 aa14.5□□□□□ -0.09
PNKP-216ENST00000601816 Q1RN00 199 aa14.5□□□□□ -0.09
PNKP-216ENST00000601816 ASB16-AS1Q495Z4 193 aa14.5□□□□□ -0.09
PNKP-216ENST00000601816 HRCT1Q6UXD1 115 aa14.5□□□□□ -0.09
PNKP-216ENST00000601816 TRAV13-2A0A0B4J235 113 aa14.49□□□□□ -0.09
PNKP-216ENST00000601816 HSBP1L1C9JCN9 74 aa14.47□□□□□ -0.09
PNKP-216ENST00000601816 S100A1P23297 94 aa14.47□□□□□ -0.09
PNKP-216ENST00000601816 A4D1N5 150 aa14.46□□□□□ -0.09
PNKP-216ENST00000601816 SEC61BP60468 96 aaKnown RBP14.46□□□□□ -0.09
PNKP-216ENST00000601816 PRO1933Q9H354 126 aa14.45□□□□□ -0.1
PNKP-216ENST00000601816 LCE2AQ5TA79 106 aaPredicted RBP14.44□□□□□ -0.1
PNKP-216ENST00000601816 SMIM11BQ8TCY0 68 aa14.44□□□□□ -0.1
PNKP-216ENST00000601816 IGLV5-48A0A075B6I7 105 aa14.43□□□□□ -0.1
PNKP-216ENST00000601816 S100A6P06703 90 aa14.43□□□□□ -0.1
PNKP-216ENST00000601816 NHP2Q9NX24 153 aaKnown RBP14.42□□□□□ -0.1
PNKP-216ENST00000601816 LINC01547P58512 204 aaPredicted RBP14.41□□□□□ -0.1
PNKP-216ENST00000601816 CD164Q04900 197 aa14.41□□□□□ -0.1
PNKP-216ENST00000601816 SMIM29Q86T20 159 aa14.41□□□□□ -0.1
PNKP-216ENST00000601816 XP32Q5T750 250 aa14.39□□□□□ -0.11
PNKP-216ENST00000601816 H7C2G1 150 aa14.37□□□□□ -0.11
PNKP-216ENST00000601816 VAMP3Q15836 100 aa14.34□□□□□ -0.11
PNKP-216ENST00000601816 KRTAP4-1Q9BYQ7 146 aa14.32□□□□□ -0.12
PNKP-216ENST00000601816 SCGB1D1O95968 90 aa14.31□□□□□ -0.12
PNKP-216ENST00000601816 Q5XG85 94 aa14.29□□□□□ -0.12
PNKP-216ENST00000601816 A0A0G2JQZ4 141 aa14.28□□□□□ -0.12
PNKP-216ENST00000601816 LINC00575Q6W349 94 aa14.28□□□□□ -0.12
PNKP-216ENST00000601816 C9orf92A6NGG3 77 aa14.26□□□□□ -0.13
PNKP-216ENST00000601816 F8WEM9 126 aa14.25□□□□□ -0.13
PNKP-216ENST00000601816 HIST1H4GQ99525 98 aa14.25□□□□□ -0.13
PNKP-216ENST00000601816 hADV29S1A0JD25 119 aa14.24□□□□□ -0.13
PNKP-216ENST00000601816 COX8AP10176 69 aa14.23□□□□□ -0.13
PNKP-216ENST00000601816 C12orf57Q99622 126 aa14.23□□□□□ -0.13
PNKP-216ENST00000601816 Q6ZQY7 126 aa14.22□□□□□ -0.13
PNKP-216ENST00000601816 C1orf195Q5TG92 126 aa14.21□□□□□ -0.13
PNKP-216ENST00000601816 DLEU1O43261 78 aa14.17□□□□□ -0.14
PNKP-216ENST00000601816 TCL1BO95988 128 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms