RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 A0A1B0GUT8 65 aa3.55□□□□□ -1.84
LINC00343-209ENST00000601607 HIGD1CA8MV81 97 aa3.55□□□□□ -1.84
LINC00343-209ENST00000601607 F8VRH5 84 aa3.55□□□□□ -1.84
LINC00343-209ENST00000601607 RAB4AP20338 218 aa3.55□□□□□ -1.84
LINC00343-209ENST00000601607 CEBPGP53567 150 aa3.55□□□□□ -1.84
LINC00343-209ENST00000601607 MOBPQ13875 183 aa3.55□□□□□ -1.84
LINC00343-209ENST00000601607 COA6Q5JTJ3 125 aaKnown RBP3.55□□□□□ -1.84
LINC00343-209ENST00000601607 MT1FP04733 61 aa3.54□□□□□ -1.84
LINC00343-209ENST00000601607 S100A8P05109 93 aa3.54□□□□□ -1.84
LINC00343-209ENST00000601607 Q6ZN92 141 aa3.54□□□□□ -1.84
LINC00343-209ENST00000601607 TMEM136Q6ZRR5 245 aa3.54□□□□□ -1.84
LINC00343-209ENST00000601607 Q8IZM0 81 aa3.54□□□□□ -1.84
LINC00343-209ENST00000601607 LINC01561Q8N1V8 128 aa3.54□□□□□ -1.84
LINC00343-209ENST00000601607 TMEM191AQ9H0A3 160 aa3.54□□□□□ -1.84
LINC00343-209ENST00000601607 ZNF706Q9Y5V0 76 aaPredicted RBP3.54□□□□□ -1.84
LINC00343-209ENST00000601607 KMT2DO14686 5537 aa3.54□□□□□ -1.84
LINC00343-209ENST00000601607 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
LINC00343-209ENST00000601607 LINC01546A6NGU7 62 aa3.53□□□□□ -1.84
LINC00343-209ENST00000601607 RAB5AP20339 215 aa3.53□□□□□ -1.84
LINC00343-209ENST00000601607 S100PP25815 95 aa3.53□□□□□ -1.84
LINC00343-209ENST00000601607 FAM104BQ5XKR9 115 aa3.53□□□□□ -1.84
LINC00343-209ENST00000601607 LAMTOR2Q9Y2Q5 125 aa3.53□□□□□ -1.84
LINC00343-209ENST00000601607 PPBPP02775 128 aa3.52□□□□□ -1.85
LINC00343-209ENST00000601607 GEMIN7Q9H840 131 aaKnown RBP3.52□□□□□ -1.85
LINC00343-209ENST00000601607 PPP1R17O96001 155 aa3.51□□□□□ -1.85
LINC00343-209ENST00000601607 RAB5BP61020 215 aa3.51□□□□□ -1.85
LINC00343-209ENST00000601607 K7EMI3 77 aa3.5□□□□□ -1.85
LINC00343-209ENST00000601607 TCAPO15273 167 aa3.5□□□□□ -1.85
LINC00343-209ENST00000601607 IGLV6-57P01721 117 aa3.5□□□□□ -1.85
LINC00343-209ENST00000601607 IFI27P40305 119 aaPredicted RBP3.5□□□□□ -1.85
LINC00343-209ENST00000601607 RPL37P61927 97 aaKnown RBP3.5□□□□□ -1.85
LINC00343-209ENST00000601607 LINC00483Q53H64 154 aa3.5□□□□□ -1.85
LINC00343-209ENST00000601607 SSBP3-AS1Q7Z2R9 100 aa3.5□□□□□ -1.85
LINC00343-209ENST00000601607 BORCS7Q96B45 105 aa3.5□□□□□ -1.85
LINC00343-209ENST00000601607 TMEM141Q96I45 108 aa3.5□□□□□ -1.85
LINC00343-209ENST00000601607 TIMM17AQ99595 171 aa3.5□□□□□ -1.85
LINC00343-209ENST00000601607 HIST1H2BKO60814 126 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 HIST1H2BJP06899 126 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 HIST1H2BOP23527 126 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 HIST1H2BBP33778 126 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 CXCL5P42830 114 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 HIST1H2BDP58876 126 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 HIST1H2BCP62807 126 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 HIST2H2BEQ16778 126 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.49□□□□□ -1.85
LINC00343-209ENST00000601607 TEX43Q6ZNM6 134 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 Q8NDZ9 215 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 HIST1H2BHQ93079 126 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 HIST1H2BNQ99877 126 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 HIST1H2BMQ99879 126 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 C20orf78Q9BR46 151 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 SMIM2Q9BVW6 85 aa3.49□□□□□ -1.85
LINC00343-209ENST00000601607 TRGC2P03986 189 aa3.48□□□□□ -1.85
LINC00343-209ENST00000601607 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
LINC00343-209ENST00000601607 MRPL51Q4U2R6 128 aaKnown RBP3.48□□□□□ -1.85
LINC00343-209ENST00000601607 MRPL54Q6P161 138 aaKnown RBP3.48□□□□□ -1.85
LINC00343-209ENST00000601607 SMCR5Q8TEV8 140 aa3.48□□□□□ -1.85
LINC00343-209ENST00000601607 C2orf88Q9BSF0 95 aa3.48□□□□□ -1.85
LINC00343-209ENST00000601607 CDKN2A-AS1Q9UH64 79 aa3.48□□□□□ -1.85
LINC00343-209ENST00000601607 ORMDL3Q8N138 153 aa3.47□□□□□ -1.85
LINC00343-209ENST00000601607 C18orf32Q8TCD1 76 aa3.47□□□□□ -1.85
LINC00343-209ENST00000601607 TRAPPC1Q9Y5R8 145 aa3.47□□□□□ -1.85
LINC00343-209ENST00000601607 LINC01549A6NIU2 74 aa3.46□□□□□ -1.86
LINC00343-209ENST00000601607 FABP9Q0Z7S8 132 aa3.46□□□□□ -1.86
LINC00343-209ENST00000601607 COX7B2Q8TF08 81 aa3.46□□□□□ -1.86
LINC00343-209ENST00000601607 CHCHD1Q96BP2 118 aaKnown RBP3.46□□□□□ -1.86
LINC00343-209ENST00000601607 NXT2Q9NPJ8 142 aaKnown RBP3.46□□□□□ -1.86
LINC00343-209ENST00000601607 A0A0J9YXY3 114 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 D6R8Y8 96 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 NPYP01303 97 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 CKS2P33552 79 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 PFN2P35080 140 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 C9orf153Q5TBE3 101 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 PP632Q6XCG6 107 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 FAM19A3Q7Z5A8 133 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 Q8N8P6 123 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 PRELID3AQ96N28 172 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 AMELXQ99217 191 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 SND1-IT1Q9HBX3 110 aa3.45□□□□□ -1.86
LINC00343-209ENST00000601607 A0A096LNJ9 63 aa3.44□□□□□ -1.86
LINC00343-209ENST00000601607 ERC2-IT1O76042 136 aa3.44□□□□□ -1.86
LINC00343-209ENST00000601607 HERVK_113P63121 156 aa3.44□□□□□ -1.86
LINC00343-209ENST00000601607 VCX2Q9H322 139 aa3.44□□□□□ -1.86
LINC00343-209ENST00000601607 CHTOPQ9Y3Y2 248 aaKnown RBP3.44□□□□□ -1.86
LINC00343-209ENST00000601607 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
LINC00343-209ENST00000601607 LINC00614P0C842 121 aa3.43□□□□□ -1.86
LINC00343-209ENST00000601607 LGALS3P17931 250 aaKnown RBP3.43□□□□□ -1.86
LINC00343-209ENST00000601607 PDZD11Q5EBL8 140 aa3.43□□□□□ -1.86
LINC00343-209ENST00000601607 HRCT1Q6UXD1 115 aa3.43□□□□□ -1.86
LINC00343-209ENST00000601607 HIST3H2BBQ8N257 126 aa3.43□□□□□ -1.86
LINC00343-209ENST00000601607 LIMD2Q9BT23 127 aa3.43□□□□□ -1.86
LINC00343-209ENST00000601607 LOC389332A0A1B0GUA5 103 aa3.42□□□□□ -1.86
LINC00343-209ENST00000601607 ATP5LO75964 103 aa3.42□□□□□ -1.86
LINC00343-209ENST00000601607 G0S2P27469 103 aa3.42□□□□□ -1.86
LINC00343-209ENST00000601607 MAP1LC3AQ9H492 121 aa3.42□□□□□ -1.86
LINC00343-209ENST00000601607 ETDCA0A1B0GVM5 59 aa3.41□□□□□ -1.86
LINC00343-209ENST00000601607 C20orf202A1L168 122 aa3.41□□□□□ -1.86
LINC00343-209ENST00000601607 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
LINC00343-209ENST00000601607 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
LINC00343-209ENST00000601607 SPINK8P0C7L1 97 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms