RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 NREPQ16612 68 aa7.16□□□□□ -1.26
LIG1-220ENST00000601091 Q6ZQY7 126 aa7.16□□□□□ -1.26
LIG1-220ENST00000601091 DEFB105AQ8NG35 78 aa7.16□□□□□ -1.26
LIG1-220ENST00000601091 APCP25054 2843 aa7.16□□□□□ -1.26
LIG1-220ENST00000601091 IGKV2-28A0A075B6P5 120 aa7.15□□□□□ -1.26
LIG1-220ENST00000601091 IGKV2D-28P01615 120 aa7.15□□□□□ -1.26
LIG1-220ENST00000601091 FASNP49327 2511 aaKnown RBP7.14□□□□□ -1.27
LIG1-220ENST00000601091 GIG44P09565 113 aaPredicted RBP7.14□□□□□ -1.27
LIG1-220ENST00000601091 CSNK1G2-AS1Q8NCQ2 148 aa7.14□□□□□ -1.27
LIG1-220ENST00000601091 ITPR3Q14573 2671 aa7.13□□□□□ -1.27
LIG1-220ENST00000601091 IGHV4-30-4P0DP06 118 aa7.13□□□□□ -1.27
LIG1-220ENST00000601091 REG3GQ6UW15 175 aa7.13□□□□□ -1.27
LIG1-220ENST00000601091 Q8N3U1 123 aa7.13□□□□□ -1.27
LIG1-220ENST00000601091 KPRPQ5T749 579 aaPredicted RBP7.12□□□□□ -1.27
LIG1-220ENST00000601091 X6R8D5 127 aa7.12□□□□□ -1.27
LIG1-220ENST00000601091 ETDCA0A1B0GVM5 59 aa7.12□□□□□ -1.27
LIG1-220ENST00000601091 C1orf64Q8NEQ6 169 aa7.12□□□□□ -1.27
LIG1-220ENST00000601091 PSCAO43653 123 aa7.11□□□□□ -1.27
LIG1-220ENST00000601091 C19orf73Q9NVV2 129 aa7.11□□□□□ -1.27
LIG1-220ENST00000601091 A6NN06 94 aa7.11□□□□□ -1.27
LIG1-220ENST00000601091 IGSF10Q6WRI0 2623 aa7.11□□□□□ -1.27
LIG1-220ENST00000601091 IGHV6-1A0A0B4J1U7 121 aa7.1□□□□□ -1.27
LIG1-220ENST00000601091 CASC2Q6XLA1 102 aa7.1□□□□□ -1.27
LIG1-220ENST00000601091 hDV103S1A0JD37 113 aa7.1□□□□□ -1.27
LIG1-220ENST00000601091 SETXQ7Z333 2677 aaKnown RBP7.09□□□□□ -1.27
LIG1-220ENST00000601091 DEFB131BA0A096LNP1 70 aa7.09□□□□□ -1.27
LIG1-220ENST00000601091 UBE2DNLQ8IWF7 75 aa7.09□□□□□ -1.27
LIG1-220ENST00000601091 TRBV10-3A0A0K0K1G6 114 aa7.09□□□□□ -1.27
LIG1-220ENST00000601091 LINC00575Q6W349 94 aa7.09□□□□□ -1.27
LIG1-220ENST00000601091 HIGD2AQ9BW72 106 aa7.09□□□□□ -1.27
LIG1-220ENST00000601091 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.09□□□□□ -1.28
LIG1-220ENST00000601091 KRTAP1-3Q8IUG1 177 aa7.08□□□□□ -1.28
LIG1-220ENST00000601091 EGFEM1PQ0D2K5 195 aa7.07□□□□□ -1.28
LIG1-220ENST00000601091 BCE1O60756 84 aa7.07□□□□□ -1.28
LIG1-220ENST00000601091 Q5VV11 94 aa7.06□□□□□ -1.28
LIG1-220ENST00000601091 BPY2O14599 106 aa7.06□□□□□ -1.28
LIG1-220ENST00000601091 UNC79Q9P2D8 2635 aa7.06□□□□□ -1.28
LIG1-220ENST00000601091 LIMD2Q9BT23 127 aa7.05□□□□□ -1.28
LIG1-220ENST00000601091 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
LIG1-220ENST00000601091 C10orf25Q5T742 122 aa7.04□□□□□ -1.28
LIG1-220ENST00000601091 C1orf134Q5TEV5 83 aa7.03□□□□□ -1.28
LIG1-220ENST00000601091 USP24Q9UPU5 2620 aa7.03□□□□□ -1.28
LIG1-220ENST00000601091 HECTD1Q9ULT8 2610 aa7.03□□□□□ -1.28
LIG1-220ENST00000601091 LINC00612Q8N6U2 182 aa7.03□□□□□ -1.28
LIG1-220ENST00000601091 Q6ZTC4 211 aa7.02□□□□□ -1.28
LIG1-220ENST00000601091 WFDC10BQ8IUB3 73 aa7.02□□□□□ -1.28
LIG1-220ENST00000601091 CR1P17927 2039 aa7.02□□□□□ -1.29
LIG1-220ENST00000601091 J3QL48 77 aa7.02□□□□□ -1.29
LIG1-220ENST00000601091 A0A0J9YWU9 116 aa7.01□□□□□ -1.29
LIG1-220ENST00000601091 C3orf84H3BNL1 204 aa7.01□□□□□ -1.29
LIG1-220ENST00000601091 KIAA0087Q14695 138 aa7.01□□□□□ -1.29
LIG1-220ENST00000601091 C22orf24Q9Y442 160 aa7.01□□□□□ -1.29
LIG1-220ENST00000601091 Q8NAQ8 132 aa7.01□□□□□ -1.29
LIG1-220ENST00000601091 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
LIG1-220ENST00000601091 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
LIG1-220ENST00000601091 MOBPQ13875 183 aa7□□□□□ -1.29
LIG1-220ENST00000601091 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
LIG1-220ENST00000601091 C6orf48Q9UBA6 75 aa7□□□□□ -1.29
LIG1-220ENST00000601091 UBR5O95071 2799 aaPredicted RBP6.99□□□□□ -1.29
LIG1-220ENST00000601091 LINC01547P58512 204 aaPredicted RBP6.99□□□□□ -1.29
LIG1-220ENST00000601091 LINC00476Q8WZB0 136 aa6.99□□□□□ -1.29
LIG1-220ENST00000601091 ATRQ13535 2644 aa6.99□□□□□ -1.29
LIG1-220ENST00000601091 CYP4F30PQ9H0H9 118 aa6.99□□□□□ -1.29
LIG1-220ENST00000601091 DHRS4-AS1Q9P1J3 65 aa6.98□□□□□ -1.29
LIG1-220ENST00000601091 KRTAP1-1Q07627 177 aa6.98□□□□□ -1.29
LIG1-220ENST00000601091 TEP1Q99973 2627 aaKnown RBP6.97□□□□□ -1.29
LIG1-220ENST00000601091 RPL37AP8A6NKH3 93 aa6.96□□□□□ -1.29
LIG1-220ENST00000601091 KRTAP10-3P60369 221 aa6.96□□□□□ -1.29
LIG1-220ENST00000601091 Q6ZQT0 140 aa6.96□□□□□ -1.3
LIG1-220ENST00000601091 GVQW2A0A096LPI5 108 aaPredicted RBP6.95□□□□□ -1.3
LIG1-220ENST00000601091 IGKV2-24A0A0C4DH68 120 aa6.95□□□□□ -1.3
LIG1-220ENST00000601091 IGLV6-57P01721 117 aa6.95□□□□□ -1.3
LIG1-220ENST00000601091 LOC110117498A0A087WWA1 95 aa6.94□□□□□ -1.3
LIG1-220ENST00000601091 H3BNG1 76 aa6.94□□□□□ -1.3
LIG1-220ENST00000601091 PRR34Q9NV39 138 aa6.94□□□□□ -1.3
LIG1-220ENST00000601091 M0R2N4 97 aa6.93□□□□□ -1.3
LIG1-220ENST00000601091 HIVEP1P15822 2718 aa6.93□□□□□ -1.3
LIG1-220ENST00000601091 Q75L30 129 aa6.93□□□□□ -1.3
LIG1-220ENST00000601091 Q8N9L7 120 aa6.93□□□□□ -1.3
LIG1-220ENST00000601091 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
LIG1-220ENST00000601091 HELZ2Q9BYK8 2649 aaKnown RBP6.92□□□□□ -1.3
LIG1-220ENST00000601091 LINC01556Q5JQF7 62 aa6.92□□□□□ -1.3
LIG1-220ENST00000601091 OBSCN-AS1Q96MR7 158 aa6.92□□□□□ -1.3
LIG1-220ENST00000601091 BAHCC1Q9P281 2608 aa6.91□□□□□ -1.3
LIG1-220ENST00000601091 FLNBO75369 2602 aaKnown RBP6.91□□□□□ -1.3
LIG1-220ENST00000601091 LINC00167Q96N53 147 aa6.91□□□□□ -1.3
LIG1-220ENST00000601091 ITPR2Q14571 2701 aa6.91□□□□□ -1.3
LIG1-220ENST00000601091 C1orf137Q5JT78 98 aa6.9□□□□□ -1.31
LIG1-220ENST00000601091 PDZD2O15018 2839 aa6.9□□□□□ -1.31
LIG1-220ENST00000601091 KRTAP16-1A8MUX0 517 aa6.89□□□□□ -1.31
LIG1-220ENST00000601091 CDK2AP2O75956 126 aa6.89□□□□□ -1.31
LIG1-220ENST00000601091 LOC101927531A0A1B0GV80 90 aa6.89□□□□□ -1.31
LIG1-220ENST00000601091 C14orf177Q52M58 125 aa6.89□□□□□ -1.31
LIG1-220ENST00000601091 LINC00208Q96KT6 92 aa6.89□□□□□ -1.31
LIG1-220ENST00000601091 ERC2-IT1O76042 136 aa6.88□□□□□ -1.31
LIG1-220ENST00000601091 CSAG1Q6PB30 78 aa6.88□□□□□ -1.31
LIG1-220ENST00000601091 SPAG11AQ6PDA7 123 aa6.88□□□□□ -1.31
LIG1-220ENST00000601091 C7orf33Q8WU49 177 aa6.88□□□□□ -1.31
LIG1-220ENST00000601091 B9D2Q9BPU9 175 aa6.88□□□□□ -1.31
LIG1-220ENST00000601091 VWFP04275 2813 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 258.8 ms