RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 C3orf22Q8N5N4 141 aa9.79□□□□□ -0.84
NOTCH3-205ENST00000600841 B5MCH6 92 aa9.78□□□□□ -0.84
NOTCH3-205ENST00000600841 IGLV6-57P01721 117 aa9.78□□□□□ -0.84
NOTCH3-205ENST00000600841 ANKRD39Q53RE8 183 aa9.78□□□□□ -0.84
NOTCH3-205ENST00000600841 EIF4EBP3O60516 100 aaPredicted RBP9.77□□□□□ -0.85
NOTCH3-205ENST00000600841 TIMM17BO60830 172 aa9.77□□□□□ -0.85
NOTCH3-205ENST00000600841 SCGB1D1O95968 90 aa9.77□□□□□ -0.85
NOTCH3-205ENST00000600841 TTTY13Q9BZ97 58 aa9.77□□□□□ -0.85
NOTCH3-205ENST00000600841 HSBP1L1C9JCN9 74 aa9.76□□□□□ -0.85
NOTCH3-205ENST00000600841 LITAFQ99732 161 aa9.76□□□□□ -0.85
NOTCH3-205ENST00000600841 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
NOTCH3-205ENST00000600841 CTAG1AP78358 180 aa9.75□□□□□ -0.85
NOTCH3-205ENST00000600841 PPDPFQ9H3Y8 114 aa9.75□□□□□ -0.85
NOTCH3-205ENST00000600841 SCGB1D4Q6XE38 83 aa9.74□□□□□ -0.85
NOTCH3-205ENST00000600841 Q6ZRX8 168 aa9.74□□□□□ -0.85
NOTCH3-205ENST00000600841 LINC00308Q8TCZ7 52 aa9.74□□□□□ -0.85
NOTCH3-205ENST00000600841 SPANXCQ9NY87 97 aa9.73□□□□□ -0.85
NOTCH3-205ENST00000600841 CBY1Q9Y3M2 126 aa9.73□□□□□ -0.85
NOTCH3-205ENST00000600841 ERC2-IT1O76042 136 aa9.72□□□□□ -0.85
NOTCH3-205ENST00000600841 JOSD1Q15040 202 aaPredicted RBP9.72□□□□□ -0.85
NOTCH3-205ENST00000600841 LINC00483Q53H64 154 aa9.72□□□□□ -0.85
NOTCH3-205ENST00000600841 GAGE2AQ6NT46 116 aa9.72□□□□□ -0.85
NOTCH3-205ENST00000600841 SPAG11AQ6PDA7 123 aa9.72□□□□□ -0.85
NOTCH3-205ENST00000600841 RETNLBQ9BQ08 111 aa9.72□□□□□ -0.85
NOTCH3-205ENST00000600841 Q9BRP9 147 aa9.72□□□□□ -0.85
NOTCH3-205ENST00000600841 TMA7Q9Y2S6 64 aaKnown RBP9.72□□□□□ -0.85
NOTCH3-205ENST00000600841 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.86
NOTCH3-205ENST00000600841 PCP2Q8IVA1 136 aa9.71□□□□□ -0.86
NOTCH3-205ENST00000600841 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
NOTCH3-205ENST00000600841 Q8NBF4 154 aa9.69□□□□□ -0.86
NOTCH3-205ENST00000600841 OR13C6PQ8NH95 151 aa9.69□□□□□ -0.86
NOTCH3-205ENST00000600841 HINT1P49773 126 aaPredicted RBP9.68□□□□□ -0.86
NOTCH3-205ENST00000600841 LINC00518Q8N0U6 118 aa9.66□□□□□ -0.86
NOTCH3-205ENST00000600841 SPANXDQ9BXN6 97 aa9.66□□□□□ -0.86
NOTCH3-205ENST00000600841 IGLV7-46A0A075B6I9 117 aa9.64□□□□□ -0.87
NOTCH3-205ENST00000600841 IGLV9-49A0A0B4J1Y8 123 aa9.64□□□□□ -0.87
NOTCH3-205ENST00000600841 MOBPQ13875 183 aa9.64□□□□□ -0.87
NOTCH3-205ENST00000600841 COPS9Q8WXC6 57 aa9.64□□□□□ -0.87
NOTCH3-205ENST00000600841 SPINK1P00995 79 aa9.62□□□□□ -0.87
NOTCH3-205ENST00000600841 IFITM1P13164 125 aa9.61□□□□□ -0.87
NOTCH3-205ENST00000600841 TPRXLQ17RH7 258 aa9.61□□□□□ -0.87
NOTCH3-205ENST00000600841 Q6ZVH6 145 aa9.61□□□□□ -0.87
NOTCH3-205ENST00000600841 SSBP3-AS1Q7Z2R9 100 aa9.61□□□□□ -0.87
NOTCH3-205ENST00000600841 ST20-AS1Q8NBB2 130 aa9.61□□□□□ -0.87
NOTCH3-205ENST00000600841 DHRS4-AS1Q9P1J3 65 aa9.6□□□□□ -0.87
NOTCH3-205ENST00000600841 MUSTN1Q8IVN3 82 aa9.59□□□□□ -0.87
NOTCH3-205ENST00000600841 VAMP8Q9BV40 100 aa9.59□□□□□ -0.87
NOTCH3-205ENST00000600841 PAM16Q9Y3D7 125 aa9.59□□□□□ -0.87
NOTCH3-205ENST00000600841 MUC2Q02817 5179 aa9.58□□□□□ -0.88
NOTCH3-205ENST00000600841 C6orf99Q4VX62 202 aa9.58□□□□□ -0.88
NOTCH3-205ENST00000600841 SPATA45Q537H7 98 aa9.58□□□□□ -0.88
NOTCH3-205ENST00000600841 C9orf153Q5TBE3 101 aa9.58□□□□□ -0.88
NOTCH3-205ENST00000600841 FP248Q71RG6 208 aaPredicted RBP9.58□□□□□ -0.88
NOTCH3-205ENST00000600841 CDIP1Q9H305 208 aa9.58□□□□□ -0.88
NOTCH3-205ENST00000600841 COX8AP10176 69 aa9.57□□□□□ -0.88
NOTCH3-205ENST00000600841 COX7BP24311 80 aa9.57□□□□□ -0.88
NOTCH3-205ENST00000600841 ELOF1P60002 83 aaKnown RBP9.57□□□□□ -0.88
NOTCH3-205ENST00000600841 C14orf144Q96I85 54 aa9.56□□□□□ -0.88
NOTCH3-205ENST00000600841 A6NDN8 102 aa9.55□□□□□ -0.88
NOTCH3-205ENST00000600841 RPS29P62273 56 aaKnown RBP9.55□□□□□ -0.88
NOTCH3-205ENST00000600841 SLC25A34Q6PIV7 304 aa9.54□□□□□ -0.88
NOTCH3-205ENST00000600841 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
NOTCH3-205ENST00000600841 SPRR1BP22528 89 aa9.53□□□□□ -0.88
NOTCH3-205ENST00000600841 DLEU1O43261 78 aa9.52□□□□□ -0.89
NOTCH3-205ENST00000600841 PYY3Q5JQD4 70 aa9.52□□□□□ -0.89
NOTCH3-205ENST00000600841 HIST1H4GQ99525 98 aa9.52□□□□□ -0.89
NOTCH3-205ENST00000600841 Q8N377 158 aa9.51□□□□□ -0.89
NOTCH3-205ENST00000600841 TRAV13-2A0A0B4J235 113 aa9.5□□□□□ -0.89
NOTCH3-205ENST00000600841 A0A1B0GWB2 263 aa9.5□□□□□ -0.89
NOTCH3-205ENST00000600841 SLC25A20O43772 301 aa9.5□□□□□ -0.89
NOTCH3-205ENST00000600841 LAMTOR3Q9UHA4 124 aa9.5□□□□□ -0.89
NOTCH3-205ENST00000600841 TAL2Q16559 108 aa9.49□□□□□ -0.89
NOTCH3-205ENST00000600841 DEFB105AQ8NG35 78 aa9.48□□□□□ -0.89
NOTCH3-205ENST00000600841 MUC17Q685J3 4493 aa9.47□□□□□ -0.89
NOTCH3-205ENST00000600841 A4D1N5 150 aa9.47□□□□□ -0.89
NOTCH3-205ENST00000600841 A0A0U1RQV1 116 aa9.46□□□□□ -0.9
NOTCH3-205ENST00000600841 TEX49A0A1B0GTD5 131 aa9.46□□□□□ -0.9
NOTCH3-205ENST00000600841 KRTAP13-3Q3SY46 172 aa9.46□□□□□ -0.9
NOTCH3-205ENST00000600841 SMIM11BQ8TCY0 68 aa9.46□□□□□ -0.9
NOTCH3-205ENST00000600841 Q1RN00 199 aa9.45□□□□□ -0.9
NOTCH3-205ENST00000600841 HIGD1BQ9P298 99 aa9.45□□□□□ -0.9
NOTCH3-205ENST00000600841 C12orf57Q99622 126 aa9.43□□□□□ -0.9
NOTCH3-205ENST00000600841 NHP2Q9NX24 153 aaKnown RBP9.43□□□□□ -0.9
NOTCH3-205ENST00000600841 C2orf91Q6ZV80 131 aa9.42□□□□□ -0.9
NOTCH3-205ENST00000600841 IGLV5-48A0A075B6I7 105 aa9.41□□□□□ -0.9
NOTCH3-205ENST00000600841 VAMP3Q15836 100 aa9.41□□□□□ -0.9
NOTCH3-205ENST00000600841 HRCT1Q6UXD1 115 aa9.41□□□□□ -0.9
NOTCH3-205ENST00000600841 LIMD2Q9BT23 127 aa9.41□□□□□ -0.9
NOTCH3-205ENST00000600841 PRO1933Q9H354 126 aa9.4□□□□□ -0.9
NOTCH3-205ENST00000600841 LINC01547P58512 204 aaPredicted RBP9.39□□□□□ -0.91
NOTCH3-205ENST00000600841 SMIM29Q86T20 159 aa9.39□□□□□ -0.91
NOTCH3-205ENST00000600841 CD164Q04900 197 aa9.38□□□□□ -0.91
NOTCH3-205ENST00000600841 RAB37Q96AX2 223 aa9.38□□□□□ -0.91
NOTCH3-205ENST00000600841 CEND1Q8N111 149 aa9.37□□□□□ -0.91
NOTCH3-205ENST00000600841 FAT4Q6V0I7 4981 aa9.37□□□□□ -0.91
NOTCH3-205ENST00000600841 UQCR10Q9UDW1 63 aa9.36□□□□□ -0.91
NOTCH3-205ENST00000600841 H7C2G1 150 aa9.35□□□□□ -0.91
NOTCH3-205ENST00000600841 LINC00575Q6W349 94 aa9.35□□□□□ -0.91
NOTCH3-205ENST00000600841 TMEM238LA0A1B0GVL6 79 aa9.34□□□□□ -0.91
NOTCH3-205ENST00000600841 A6NJY4 79 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms