RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648		A0A0J9YXY3	114 aa		12.14	□□□□□ -0.47
FARP1-231	ENST00000600648	SSBP3-AS1	Q7Z2R9	100 aa		12.13	□□□□□ -0.47
FARP1-231	ENST00000600648	KRTAP9-2	Q9BYQ4	174 aa		12.12	□□□□□ -0.47
FARP1-231	ENST00000600648		E9PLD3	99 aa		12.1	□□□□□ -0.47
FARP1-231	ENST00000600648	ZNF73	O43830	326 aa	Predicted RBP	12.1	□□□□□ -0.47
FARP1-231	ENST00000600648	JOSD1	Q15040	202 aa	Predicted RBP	12.1	□□□□□ -0.47
FARP1-231	ENST00000600648	C9orf153	Q5TBE3	101 aa		12.1	□□□□□ -0.47
FARP1-231	ENST00000600648	ST20-AS1	Q8NBB2	130 aa		12.1	□□□□□ -0.47
FARP1-231	ENST00000600648		Q8N377	158 aa		12.09	□□□□□ -0.47
FARP1-231	ENST00000600648	SYS1-DBNDD2	H3BUS1	97 aa		12.05	□□□□□ -0.48
FARP1-231	ENST00000600648	RPS29	P62273	56 aa	Known RBP	12.05	□□□□□ -0.48
FARP1-231	ENST00000600648	ASB16-AS1	Q495Z4	193 aa		12.05	□□□□□ -0.48
FARP1-231	ENST00000600648	OR13C6P	Q8NH95	151 aa		12.05	□□□□□ -0.48
FARP1-231	ENST00000600648	SLC25A20	O43772	301 aa		12.04	□□□□□ -0.48
FARP1-231	ENST00000600648	HINT1	P49773	126 aa	Predicted RBP	12.03	□□□□□ -0.48
FARP1-231	ENST00000600648	LINC00308	Q8TCZ7	52 aa		12.03	□□□□□ -0.48
FARP1-231	ENST00000600648	LITAF	Q99732	161 aa		12.03	□□□□□ -0.48
FARP1-231	ENST00000600648	SPANXC	Q9NY87	97 aa		12.01	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST1H2BK	O60814	126 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST1H2BJ	P06899	126 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST1H2BO	P23527	126 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST1H2BB	P33778	126 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST1H2BD	P58876	126 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	SEC61B	P60468	96 aa	Known RBP	12	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST1H2BC	P62807	126 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST2H2BE	Q16778	126 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST1H2BH	Q93079	126 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST1H2BN	Q99877	126 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	HIST1H2BM	Q99879	126 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	KRTAP4-1	Q9BYQ7	146 aa		12	□□□□□ -0.49
FARP1-231	ENST00000600648	TTTY13	Q9BZ97	58 aa		11.99	□□□□□ -0.49
FARP1-231	ENST00000600648	CBY1	Q9Y3M2	126 aa		11.99	□□□□□ -0.49
FARP1-231	ENST00000600648	ZNF815P	A8K554	130 aa		11.98	□□□□□ -0.49
FARP1-231	ENST00000600648	LINC01545	Q5VT33	79 aa		11.98	□□□□□ -0.49
FARP1-231	ENST00000600648	TIMM17B	O60830	172 aa		11.97	□□□□□ -0.49
FARP1-231	ENST00000600648	HRCT1	Q6UXD1	115 aa		11.96	□□□□□ -0.49
FARP1-231	ENST00000600648	PET117	Q6UWS5	81 aa		11.95	□□□□□ -0.5
FARP1-231	ENST00000600648	C5orf52	A6NGY3	159 aa		11.94	□□□□□ -0.5
FARP1-231	ENST00000600648	SPANXD	Q9BXN6	97 aa		11.93	□□□□□ -0.5
FARP1-231	ENST00000600648	DHRS4-AS1	Q9P1J3	65 aa		11.93	□□□□□ -0.5
FARP1-231	ENST00000600648	XP32	Q5T750	250 aa		11.92	□□□□□ -0.5
FARP1-231	ENST00000600648	C3orf79	P0CE67	100 aa		11.91	□□□□□ -0.5
FARP1-231	ENST00000600648	SPRR1B	P22528	89 aa		11.91	□□□□□ -0.5
FARP1-231	ENST00000600648	COX7B	P24311	80 aa		11.91	□□□□□ -0.5
FARP1-231	ENST00000600648	LINC01547	P58512	204 aa	Predicted RBP	11.91	□□□□□ -0.5
FARP1-231	ENST00000600648	C6orf99	Q4VX62	202 aa		11.91	□□□□□ -0.5
FARP1-231	ENST00000600648	SLC25A34	Q6PIV7	304 aa		11.9	□□□□□ -0.5
FARP1-231	ENST00000600648	ELOF1	P60002	83 aa	Known RBP	11.89	□□□□□ -0.51
FARP1-231	ENST00000600648	KRTDAP	P60985	99 aa		11.89	□□□□□ -0.51
FARP1-231	ENST00000600648	DEFB105A	Q8NG35	78 aa		11.89	□□□□□ -0.51
FARP1-231	ENST00000600648	LAMTOR3	Q9UHA4	124 aa		11.89	□□□□□ -0.51
FARP1-231	ENST00000600648	LINC00518	Q8N0U6	118 aa		11.88	□□□□□ -0.51
FARP1-231	ENST00000600648		Q1RN00	199 aa		11.87	□□□□□ -0.51
FARP1-231	ENST00000600648	TAL2	Q16559	108 aa		11.86	□□□□□ -0.51
FARP1-231	ENST00000600648	SCGB1D4	Q6XE38	83 aa		11.86	□□□□□ -0.51
FARP1-231	ENST00000600648	LIMD2	Q9BT23	127 aa		11.86	□□□□□ -0.51
FARP1-231	ENST00000600648	COA6	Q5JTJ3	125 aa	Known RBP	11.84	□□□□□ -0.51
FARP1-231	ENST00000600648	C9orf92	A6NGG3	77 aa		11.82	□□□□□ -0.52
FARP1-231	ENST00000600648	ANKRD39	Q53RE8	183 aa		11.82	□□□□□ -0.52
FARP1-231	ENST00000600648	ATOH7	Q8N100	152 aa		11.81	□□□□□ -0.52
FARP1-231	ENST00000600648	TEX49	A0A1B0GTD5	131 aa		11.79	□□□□□ -0.52
FARP1-231	ENST00000600648		A6NDN8	102 aa		11.79	□□□□□ -0.52
FARP1-231	ENST00000600648		H7C2G1	150 aa		11.79	□□□□□ -0.52
FARP1-231	ENST00000600648	C20orf202	A1L168	122 aa		11.78	□□□□□ -0.52
FARP1-231	ENST00000600648	PRO1933	Q9H354	126 aa		11.78	□□□□□ -0.52
FARP1-231	ENST00000600648	KRTAP9-6	A0A140TA67	174 aa		11.77	□□□□□ -0.53
FARP1-231	ENST00000600648	TRBV7-6	A0A0J9YX20	115 aa		11.76	□□□□□ -0.53
FARP1-231	ENST00000600648	PCOTH	Q58A44	107 aa		11.76	□□□□□ -0.53
FARP1-231	ENST00000600648	MUSTN1	Q8IVN3	82 aa		11.76	□□□□□ -0.53
FARP1-231	ENST00000600648	COPS9	Q8WXC6	57 aa		11.76	□□□□□ -0.53
FARP1-231	ENST00000600648		A0A0G2JQZ4	141 aa		11.75	□□□□□ -0.53
FARP1-231	ENST00000600648		A0A1B0GWB2	263 aa		11.75	□□□□□ -0.53
FARP1-231	ENST00000600648	IFITM1	P13164	125 aa		11.75	□□□□□ -0.53
FARP1-231	ENST00000600648	SMIM29	Q86T20	159 aa		11.75	□□□□□ -0.53
FARP1-231	ENST00000600648	PCP2	Q8IVA1	136 aa		11.75	□□□□□ -0.53
FARP1-231	ENST00000600648	CD164	Q04900	197 aa		11.74	□□□□□ -0.53
FARP1-231	ENST00000600648	AKR1D1	P51857	326 aa		11.72	□□□□□ -0.53
FARP1-231	ENST00000600648	IGLV8-61	A0A075B6I0	122 aa		11.71	□□□□□ -0.53
FARP1-231	ENST00000600648		Q6ZVH6	145 aa		11.71	□□□□□ -0.53
FARP1-231	ENST00000600648	IGLV5-48	A0A075B6I7	105 aa		11.7	□□□□□ -0.54
FARP1-231	ENST00000600648	LCE2C	Q5TA81	110 aa		11.7	□□□□□ -0.54
FARP1-231	ENST00000600648	SMIM11B	Q8TCY0	68 aa		11.68	□□□□□ -0.54
FARP1-231	ENST00000600648	C1orf195	Q5TG92	126 aa		11.67	□□□□□ -0.54
FARP1-231	ENST00000600648	TRAV13-2	A0A0B4J235	113 aa		11.66	□□□□□ -0.54
FARP1-231	ENST00000600648	S100A6	P06703	90 aa		11.66	□□□□□ -0.54
FARP1-231	ENST00000600648		A4D1N5	150 aa		11.65	□□□□□ -0.54
FARP1-231	ENST00000600648	KRTAP19-2	Q3LHN2	52 aa		11.64	□□□□□ -0.55
FARP1-231	ENST00000600648		Q5XG85	94 aa		11.64	□□□□□ -0.55
FARP1-231	ENST00000600648	NHP2	Q9NX24	153 aa	Known RBP	11.63	□□□□□ -0.55
FARP1-231	ENST00000600648	HIST3H2BB	Q8N257	126 aa		11.62	□□□□□ -0.55
FARP1-231	ENST00000600648	LCE2D	Q5TA82	110 aa	Predicted RBP	11.59	□□□□□ -0.55
FARP1-231	ENST00000600648	HIST1H2BL	Q99880	126 aa		11.59	□□□□□ -0.55
FARP1-231	ENST00000600648	SNRPE	P62304	92 aa	Known RBP	11.58	□□□□□ -0.56
FARP1-231	ENST00000600648	S100A2	P29034	98 aa		11.57	□□□□□ -0.56
FARP1-231	ENST00000600648	MT1H	P80294	61 aa		11.57	□□□□□ -0.56
FARP1-231	ENST00000600648		F8WEM9	126 aa		11.56	□□□□□ -0.56
FARP1-231	ENST00000600648	VAMP3	Q15836	100 aa		11.56	□□□□□ -0.56
FARP1-231	ENST00000600648	TCL1B	O95988	128 aa		11.55	□□□□□ -0.56
FARP1-231	ENST00000600648	LINC00575	Q6W349	94 aa		11.55	□□□□□ -0.56

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