RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 RPL24P83731 157 aaKnown RBP10.12□□□□□ -0.79
SSBP4-207ENST00000600244 C14orf144Q96I85 54 aa10.12□□□□□ -0.79
SSBP4-207ENST00000600244 MRPL55Q7Z7F7 128 aaKnown RBP10.11□□□□□ -0.79
SSBP4-207ENST00000600244 LINC00308Q8TCZ7 52 aa10.11□□□□□ -0.79
SSBP4-207ENST00000600244 KRTAP13-2Q52LG2 175 aa10.1□□□□□ -0.79
SSBP4-207ENST00000600244 Q6ZVH6 145 aa10.1□□□□□ -0.79
SSBP4-207ENST00000600244 SPANXB1Q9NS25 103 aaPredicted RBP10.1□□□□□ -0.79
SSBP4-207ENST00000600244 NDUFC2O95298 119 aa10.09□□□□□ -0.79
SSBP4-207ENST00000600244 CFC1BP0CG36 223 aa10.09□□□□□ -0.79
SSBP4-207ENST00000600244 SMIM6P0DI80 62 aa10.09□□□□□ -0.79
SSBP4-207ENST00000600244 LBHQ53QV2 105 aaPredicted RBP10.09□□□□□ -0.79
SSBP4-207ENST00000600244 LINC00167Q96N53 147 aa10.09□□□□□ -0.79
SSBP4-207ENST00000600244 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
SSBP4-207ENST00000600244 LINC00304Q8N9R0 145 aa10.08□□□□□ -0.8
SSBP4-207ENST00000600244 NKAPP1Q8N9T2 125 aa10.08□□□□□ -0.8
SSBP4-207ENST00000600244 MIEN1Q9BRT3 115 aa10.08□□□□□ -0.8
SSBP4-207ENST00000600244 IFITM1P13164 125 aa10.07□□□□□ -0.8
SSBP4-207ENST00000600244 NPC2P61916 151 aa10.07□□□□□ -0.8
SSBP4-207ENST00000600244 MT1HP80294 61 aa10.07□□□□□ -0.8
SSBP4-207ENST00000600244 SLC25A34Q6PIV7 304 aa10.07□□□□□ -0.8
SSBP4-207ENST00000600244 HIGD1BQ9P298 99 aa10.07□□□□□ -0.8
SSBP4-207ENST00000600244 TRBV10-2A0A0K0K1G8 114 aa10.06□□□□□ -0.8
SSBP4-207ENST00000600244 M0R378 163 aa10.06□□□□□ -0.8
SSBP4-207ENST00000600244 CTAG1AP78358 180 aa10.06□□□□□ -0.8
SSBP4-207ENST00000600244 C2orf91Q6ZV80 131 aa10.06□□□□□ -0.8
SSBP4-207ENST00000600244 S100A12P80511 92 aa10.05□□□□□ -0.8
SSBP4-207ENST00000600244 KRTAP19-2Q3LHN2 52 aa10.05□□□□□ -0.8
SSBP4-207ENST00000600244 GAGE10A6NGK3 116 aa10.04□□□□□ -0.8
SSBP4-207ENST00000600244 MUSTN1Q8IVN3 82 aa10.04□□□□□ -0.8
SSBP4-207ENST00000600244 ANAPC11Q9NYG5 84 aa10.04□□□□□ -0.8
SSBP4-207ENST00000600244 RPL37AP8A6NKH3 93 aa10.03□□□□□ -0.8
SSBP4-207ENST00000600244 NCR3O14931 201 aa10.03□□□□□ -0.8
SSBP4-207ENST00000600244 COPS9Q8WXC6 57 aa10.03□□□□□ -0.8
SSBP4-207ENST00000600244 IGKV2-28A0A075B6P5 120 aa10.02□□□□□ -0.81
SSBP4-207ENST00000600244 IGKV2D-28P01615 120 aa10.02□□□□□ -0.81
SSBP4-207ENST00000600244 KRTAP10-6P60371 365 aaPredicted RBP10.01□□□□□ -0.81
SSBP4-207ENST00000600244 SEC61BP60468 96 aaKnown RBP10.01□□□□□ -0.81
SSBP4-207ENST00000600244 KRTAP13-3Q3SY46 172 aa10.01□□□□□ -0.81
SSBP4-207ENST00000600244 LINC00337Q8N6G1 96 aa10.01□□□□□ -0.81
SSBP4-207ENST00000600244 IGLV6-57P01721 117 aa9.99□□□□□ -0.81
SSBP4-207ENST00000600244 UQCR10Q9UDW1 63 aa9.99□□□□□ -0.81
SSBP4-207ENST00000600244 TRBV10-3A0A0K0K1G6 114 aa9.98□□□□□ -0.81
SSBP4-207ENST00000600244 LINC00518Q8N0U6 118 aa9.98□□□□□ -0.81
SSBP4-207ENST00000600244 KCNQ1DNQ9H478 68 aa9.98□□□□□ -0.81
SSBP4-207ENST00000600244 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
SSBP4-207ENST00000600244 TAL2Q16559 108 aa9.97□□□□□ -0.81
SSBP4-207ENST00000600244 HIST1H4GQ99525 98 aa9.97□□□□□ -0.81
SSBP4-207ENST00000600244 DDTP30046 118 aa9.96□□□□□ -0.82
SSBP4-207ENST00000600244 SPRR1AP35321 89 aa9.96□□□□□ -0.82
SSBP4-207ENST00000600244 FAM229BQ4G0N7 80 aa9.96□□□□□ -0.82
SSBP4-207ENST00000600244 FP248Q71RG6 208 aaPredicted RBP9.96□□□□□ -0.82
SSBP4-207ENST00000600244 TMEM126AQ9H061 195 aa9.96□□□□□ -0.82
SSBP4-207ENST00000600244 A4D1N5 150 aa9.95□□□□□ -0.82
SSBP4-207ENST00000600244 PRYO14603 147 aa9.95□□□□□ -0.82
SSBP4-207ENST00000600244 BCE1O60756 84 aa9.95□□□□□ -0.82
SSBP4-207ENST00000600244 C12orf57Q99622 126 aa9.95□□□□□ -0.82
SSBP4-207ENST00000600244 KRTAP4-16G5E9R7 235 aaPredicted RBP9.94□□□□□ -0.82
SSBP4-207ENST00000600244 KRTAP13-1Q8IUC0 172 aa9.94□□□□□ -0.82
SSBP4-207ENST00000600244 PRO1933Q9H354 126 aa9.94□□□□□ -0.82
SSBP4-207ENST00000600244 S100A7L2Q5SY68 101 aa9.93□□□□□ -0.82
SSBP4-207ENST00000600244 CEND1Q8N111 149 aa9.92□□□□□ -0.82
SSBP4-207ENST00000600244 HSD52Q0P140 79 aa9.9□□□□□ -0.82
SSBP4-207ENST00000600244 SSPOA2VEC9 5147 aa9.9□□□□□ -0.82
SSBP4-207ENST00000600244 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
SSBP4-207ENST00000600244 TRAV13-2A0A0B4J235 113 aa9.89□□□□□ -0.83
SSBP4-207ENST00000600244 OR13C6PQ8NH95 151 aa9.89□□□□□ -0.83
SSBP4-207ENST00000600244 CBY1Q9Y3M2 126 aa9.88□□□□□ -0.83
SSBP4-207ENST00000600244 CFC1P0CG37 223 aa9.87□□□□□ -0.83
SSBP4-207ENST00000600244 FXYD2P54710 66 aa9.87□□□□□ -0.83
SSBP4-207ENST00000600244 A6NDN8 102 aa9.86□□□□□ -0.83
SSBP4-207ENST00000600244 ZNF73O43830 326 aaPredicted RBP9.86□□□□□ -0.83
SSBP4-207ENST00000600244 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
SSBP4-207ENST00000600244 A0A0B4J2C4 111 aa9.85□□□□□ -0.83
SSBP4-207ENST00000600244 B5MCH6 92 aa9.85□□□□□ -0.83
SSBP4-207ENST00000600244 PRLHP81277 87 aa9.85□□□□□ -0.83
SSBP4-207ENST00000600244 USH2AO75445 5202 aa9.84□□□□□ -0.83
SSBP4-207ENST00000600244 TSTD3H0UI37 97 aa9.84□□□□□ -0.83
SSBP4-207ENST00000600244 UBE2AP49459 152 aa9.84□□□□□ -0.83
SSBP4-207ENST00000600244 TMEM238LA0A1B0GVL6 79 aa9.83□□□□□ -0.84
SSBP4-207ENST00000600244 ETDCA0A1B0GVM5 59 aa9.83□□□□□ -0.84
SSBP4-207ENST00000600244 A6NJY4 79 aa9.83□□□□□ -0.84
SSBP4-207ENST00000600244 C6orf99Q4VX62 202 aa9.82□□□□□ -0.84
SSBP4-207ENST00000600244 SPAG11AQ6PDA7 123 aa9.82□□□□□ -0.84
SSBP4-207ENST00000600244 Q6ZRX8 168 aa9.82□□□□□ -0.84
SSBP4-207ENST00000600244 SMIM11BQ8TCY0 68 aa9.82□□□□□ -0.84
SSBP4-207ENST00000600244 TRBV7-6A0A0J9YX20 115 aa9.81□□□□□ -0.84
SSBP4-207ENST00000600244 A0A1B0GWB2 263 aa9.81□□□□□ -0.84
SSBP4-207ENST00000600244 BVES-AS1Q5T3Y7 98 aa9.8□□□□□ -0.84
SSBP4-207ENST00000600244 Q9BRP9 147 aa9.8□□□□□ -0.84
SSBP4-207ENST00000600244 FCGBPQ9Y6R7 5405 aaPredicted RBP9.79□□□□□ -0.84
SSBP4-207ENST00000600244 XP32Q5T750 250 aa9.79□□□□□ -0.84
SSBP4-207ENST00000600244 C3orf22Q8N5N4 141 aa9.79□□□□□ -0.84
SSBP4-207ENST00000600244 SMCR5Q8TEV8 140 aa9.79□□□□□ -0.84
SSBP4-207ENST00000600244 ELOF1P60002 83 aaKnown RBP9.78□□□□□ -0.84
SSBP4-207ENST00000600244 RAB37Q96AX2 223 aa9.78□□□□□ -0.84
SSBP4-207ENST00000600244 PRO1854Q9UHT4 67 aa9.78□□□□□ -0.84
SSBP4-207ENST00000600244 HIGD2AQ9BW72 106 aa9.77□□□□□ -0.85
SSBP4-207ENST00000600244 HINT1P49773 126 aaPredicted RBP9.76□□□□□ -0.85
SSBP4-207ENST00000600244 NHP2Q9NX24 153 aaKnown RBP9.76□□□□□ -0.85
SSBP4-207ENST00000600244 ERC2-IT1O76042 136 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms