RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 C6orf99Q4VX62 202 aa9.88□□□□□ -0.83
VRK3-218ENST00000600031 C9orf153Q5TBE3 101 aa9.87□□□□□ -0.83
VRK3-218ENST00000600031 DNAH2Q9P225 4427 aa9.87□□□□□ -0.83
VRK3-218ENST00000600031 LRCOL1A6NCL2 159 aa9.86□□□□□ -0.83
VRK3-218ENST00000600031 COX7CP15954 63 aa9.86□□□□□ -0.83
VRK3-218ENST00000600031 LINC00575Q6W349 94 aa9.86□□□□□ -0.83
VRK3-218ENST00000600031 IGKV3D-7A0A0C4DH55 119 aa9.85□□□□□ -0.83
VRK3-218ENST00000600031 RPL18AQ02543 176 aaKnown RBP9.85□□□□□ -0.83
VRK3-218ENST00000600031 Q8NDZ9 215 aa9.85□□□□□ -0.83
VRK3-218ENST00000600031 NDUFC2-KCTD14E9PQ53 114 aa9.83□□□□□ -0.84
VRK3-218ENST00000600031 ATP5EP2Q5VTU8 51 aa9.83□□□□□ -0.84
VRK3-218ENST00000600031 hADV29S1A0JD25 119 aa9.83□□□□□ -0.84
VRK3-218ENST00000600031 Q6ZRP5 223 aa9.83□□□□□ -0.84
VRK3-218ENST00000600031 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
VRK3-218ENST00000600031 H3BQ85 93 aa9.82□□□□□ -0.84
VRK3-218ENST00000600031 IGLV6-57P01721 117 aa9.82□□□□□ -0.84
VRK3-218ENST00000600031 HYDINQ4G0P3 5121 aa9.82□□□□□ -0.84
VRK3-218ENST00000600031 C14orf177Q52M58 125 aa9.82□□□□□ -0.84
VRK3-218ENST00000600031 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.81□□□□□ -0.84
VRK3-218ENST00000600031 C1orf134Q5TEV5 83 aa9.8□□□□□ -0.84
VRK3-218ENST00000600031 CRYGAP11844 174 aa9.8□□□□□ -0.84
VRK3-218ENST00000600031 CNBPP62633 177 aaKnown RBP9.8□□□□□ -0.84
VRK3-218ENST00000600031 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
VRK3-218ENST00000600031 SMIM20Q8N5G0 67 aa9.79□□□□□ -0.84
VRK3-218ENST00000600031 A0A087WTM6 91 aa9.78□□□□□ -0.84
VRK3-218ENST00000600031 RBM3P98179 157 aaKnown RBP9.78□□□□□ -0.84
VRK3-218ENST00000600031 UBL5Q9BZL1 73 aa9.78□□□□□ -0.84
VRK3-218ENST00000600031 LOC110117498A0A087WWA1 95 aa9.77□□□□□ -0.84
VRK3-218ENST00000600031 TRBV10-3A0A0K0K1G6 114 aa9.77□□□□□ -0.84
VRK3-218ENST00000600031 SERP2Q8N6R1 65 aa9.77□□□□□ -0.85
VRK3-218ENST00000600031 A0A087WVE0 104 aa9.76□□□□□ -0.85
VRK3-218ENST00000600031 DNAH17Q9UFH2 4485 aa9.76□□□□□ -0.85
VRK3-218ENST00000600031 FRAS1Q86XX4 4008 aa9.76□□□□□ -0.85
VRK3-218ENST00000600031 Q6ZQT0 140 aa9.76□□□□□ -0.85
VRK3-218ENST00000600031 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
VRK3-218ENST00000600031 DIRC1Q969H9 104 aa9.75□□□□□ -0.85
VRK3-218ENST00000600031 LAMTOR3Q9UHA4 124 aa9.75□□□□□ -0.85
VRK3-218ENST00000600031 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
VRK3-218ENST00000600031 LOC107984640A0A0U1RRK4 108 aa9.74□□□□□ -0.85
VRK3-218ENST00000600031 GHRHP01286 108 aa9.74□□□□□ -0.85
VRK3-218ENST00000600031 PDE6GP18545 87 aa9.74□□□□□ -0.85
VRK3-218ENST00000600031 HECTD4Q9Y4D8 3996 aa9.73□□□□□ -0.85
VRK3-218ENST00000600031 TRBV7-6A0A0J9YX20 115 aa9.73□□□□□ -0.85
VRK3-218ENST00000600031 VPREB1P12018 145 aa9.73□□□□□ -0.85
VRK3-218ENST00000600031 Q6ZQY7 126 aa9.73□□□□□ -0.85
VRK3-218ENST00000600031 DSCR8Q96T75 97 aa9.72□□□□□ -0.85
VRK3-218ENST00000600031 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.71□□□□□ -0.85
VRK3-218ENST00000600031 C9orf163Q8N9P6 203 aa9.71□□□□□ -0.85
VRK3-218ENST00000600031 RTL8CO15255 209 aa9.71□□□□□ -0.86
VRK3-218ENST00000600031 COX7BP24311 80 aa9.71□□□□□ -0.86
VRK3-218ENST00000600031 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.86
VRK3-218ENST00000600031 TNP2Q05952 138 aa9.71□□□□□ -0.86
VRK3-218ENST00000600031 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
VRK3-218ENST00000600031 SERTAD4-AS1Q5TG53 156 aa9.7□□□□□ -0.86
VRK3-218ENST00000600031 A0A096LNI7 61 aa9.7□□□□□ -0.86
VRK3-218ENST00000600031 FAM168BA1KXE4 195 aa9.69□□□□□ -0.86
VRK3-218ENST00000600031 ELOF1P60002 83 aaKnown RBP9.69□□□□□ -0.86
VRK3-218ENST00000600031 LCE6AA0A183 80 aa9.68□□□□□ -0.86
VRK3-218ENST00000600031 C16orf90A8MZG2 172 aa9.68□□□□□ -0.86
VRK3-218ENST00000600031 M0R378 163 aa9.68□□□□□ -0.86
VRK3-218ENST00000600031 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
VRK3-218ENST00000600031 FAM19A1Q7Z5A9 133 aa9.67□□□□□ -0.86
VRK3-218ENST00000600031 KRTAP7-1Q8IUC3 87 aa9.67□□□□□ -0.86
VRK3-218ENST00000600031 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
VRK3-218ENST00000600031 BCE1O60756 84 aa9.66□□□□□ -0.86
VRK3-218ENST00000600031 CHTF8P0CG12 524 aa9.65□□□□□ -0.86
VRK3-218ENST00000600031 FAT2Q9NYQ8 4349 aa9.65□□□□□ -0.86
VRK3-218ENST00000600031 TMEM258P61165 79 aa9.65□□□□□ -0.86
VRK3-218ENST00000600031 Q6ZVQ6 151 aa9.65□□□□□ -0.86
VRK3-218ENST00000600031 DNAH11Q96DT5 4516 aa9.64□□□□□ -0.87
VRK3-218ENST00000600031 TRBV7-4A0A0J9YYF1 115 aa9.64□□□□□ -0.87
VRK3-218ENST00000600031 LINC01547P58512 204 aaPredicted RBP9.64□□□□□ -0.87
VRK3-218ENST00000600031 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
VRK3-218ENST00000600031 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
VRK3-218ENST00000600031 IGLV5-37A0A075B6J1 123 aa9.63□□□□□ -0.87
VRK3-218ENST00000600031 RPS28P62857 69 aaKnown RBP9.63□□□□□ -0.87
VRK3-218ENST00000600031 A0A1W2PNN7 141 aa9.62□□□□□ -0.87
VRK3-218ENST00000600031 J3KT08 172 aa9.62□□□□□ -0.87
VRK3-218ENST00000600031 CXCL6P80162 114 aa9.62□□□□□ -0.87
VRK3-218ENST00000600031 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
VRK3-218ENST00000600031 CYSTM1Q9H1C7 97 aa9.62□□□□□ -0.87
VRK3-218ENST00000600031 IGLV5-52A0A0A0MRZ9 124 aa9.61□□□□□ -0.87
VRK3-218ENST00000600031 PANO1I0J062 215 aa9.61□□□□□ -0.87
VRK3-218ENST00000600031 HAMPP81172 84 aa9.61□□□□□ -0.87
VRK3-218ENST00000600031 LINC00528Q8N1L1 170 aa9.61□□□□□ -0.87
VRK3-218ENST00000600031 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
VRK3-218ENST00000600031 KRTAP10-2P60368 255 aa9.59□□□□□ -0.87
VRK3-218ENST00000600031 KMT2CQ8NEZ4 4911 aaKnown RBP9.59□□□□□ -0.87
VRK3-218ENST00000600031 MRPL55Q7Z7F7 128 aaKnown RBP9.58□□□□□ -0.88
VRK3-218ENST00000600031 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.58□□□□□ -0.88
VRK3-218ENST00000600031 DNAH5Q8TE73 4624 aa9.58□□□□□ -0.88
VRK3-218ENST00000600031 PKD1P98161 4303 aa9.58□□□□□ -0.88
VRK3-218ENST00000600031 RPL37AP8A6NKH3 93 aa9.58□□□□□ -0.88
VRK3-218ENST00000600031 RYR2Q92736 4967 aa9.57□□□□□ -0.88
VRK3-218ENST00000600031 LINC00474Q9P2X8 69 aa9.57□□□□□ -0.88
VRK3-218ENST00000600031 TRAV7A0A075B6U4 112 aa9.56□□□□□ -0.88
VRK3-218ENST00000600031 IGLV1-50A0A075B6I6 118 aa9.56□□□□□ -0.88
VRK3-218ENST00000600031 SPACA4Q8TDM5 124 aa9.56□□□□□ -0.88
VRK3-218ENST00000600031 KCNQ1DNQ9H478 68 aa9.55□□□□□ -0.88
VRK3-218ENST00000600031 DPH3Q96FX2 82 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms