RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ETDCA0A1B0GVM5 59 aa10.06□□□□□ -0.8
SHKBP1-219ENST00000599575 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
SHKBP1-219ENST00000599575 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
SHKBP1-219ENST00000599575 KRTAP4-16G5E9R7 235 aaPredicted RBP10.05□□□□□ -0.8
SHKBP1-219ENST00000599575 HINT1P49773 126 aaPredicted RBP10.05□□□□□ -0.8
SHKBP1-219ENST00000599575 UQCR10Q9UDW1 63 aa10.05□□□□□ -0.8
SHKBP1-219ENST00000599575 FLG2Q5D862 2391 aaPredicted RBP10.05□□□□□ -0.8
SHKBP1-219ENST00000599575 ZNF73O43830 326 aaPredicted RBP10.04□□□□□ -0.8
SHKBP1-219ENST00000599575 C2orf91Q6ZV80 131 aa10.04□□□□□ -0.8
SHKBP1-219ENST00000599575 A4D1N5 150 aa10.03□□□□□ -0.8
SHKBP1-219ENST00000599575 A6NDN8 102 aa10.02□□□□□ -0.81
SHKBP1-219ENST00000599575 PRLHP81277 87 aa10.01□□□□□ -0.81
SHKBP1-219ENST00000599575 LINC01600Q96MT4 127 aa10.01□□□□□ -0.81
SHKBP1-219ENST00000599575 PKHD1L1Q86WI1 4243 aa10□□□□□ -0.81
SHKBP1-219ENST00000599575 TRBV7-6A0A0J9YX20 115 aa10□□□□□ -0.81
SHKBP1-219ENST00000599575 LOC105371267A0A1B0GV96 52 aa10□□□□□ -0.81
SHKBP1-219ENST00000599575 TMEM238LA0A1B0GVL6 79 aa10□□□□□ -0.81
SHKBP1-219ENST00000599575 A6NJY4 79 aa10□□□□□ -0.81
SHKBP1-219ENST00000599575 B5MCH6 92 aa10□□□□□ -0.81
SHKBP1-219ENST00000599575 Q6ZRX8 168 aa10□□□□□ -0.81
SHKBP1-219ENST00000599575 CEND1Q8N111 149 aa9.98□□□□□ -0.81
SHKBP1-219ENST00000599575 HSD52Q0P140 79 aa9.97□□□□□ -0.81
SHKBP1-219ENST00000599575 HIGD2AQ9BW72 106 aa9.97□□□□□ -0.81
SHKBP1-219ENST00000599575 ZNF706Q9Y5V0 76 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-219ENST00000599575 J3QL48 77 aa9.96□□□□□ -0.82
SHKBP1-219ENST00000599575 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
SHKBP1-219ENST00000599575 A0A0B4J2C4 111 aa9.95□□□□□ -0.82
SHKBP1-219ENST00000599575 KRTAP1-4P0C5Y4 121 aa9.95□□□□□ -0.82
SHKBP1-219ENST00000599575 C6orf99Q4VX62 202 aa9.95□□□□□ -0.82
SHKBP1-219ENST00000599575 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
SHKBP1-219ENST00000599575 LRP1Q07954 4544 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-219ENST00000599575 A0A1B0GWB2 263 aa9.94□□□□□ -0.82
SHKBP1-219ENST00000599575 RPL13AP40429 203 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-219ENST00000599575 ELOF1P60002 83 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-219ENST00000599575 COX7BP24311 80 aa9.93□□□□□ -0.82
SHKBP1-219ENST00000599575 VAMP3Q15836 100 aa9.93□□□□□ -0.82
SHKBP1-219ENST00000599575 FAM229BQ4G0N7 80 aa9.93□□□□□ -0.82
SHKBP1-219ENST00000599575 SMCR5Q8TEV8 140 aa9.93□□□□□ -0.82
SHKBP1-219ENST00000599575 RAB37Q96AX2 223 aa9.93□□□□□ -0.82
SHKBP1-219ENST00000599575 CFC1BP0CG36 223 aa9.92□□□□□ -0.82
SHKBP1-219ENST00000599575 CFC1P0CG37 223 aa9.92□□□□□ -0.82
SHKBP1-219ENST00000599575 SMIM11BQ8TCY0 68 aa9.92□□□□□ -0.82
SHKBP1-219ENST00000599575 FAT3Q8TDW7 4589 aa9.92□□□□□ -0.82
SHKBP1-219ENST00000599575 C12orf57Q99622 126 aa9.91□□□□□ -0.82
SHKBP1-219ENST00000599575 Q9BRP9 147 aa9.91□□□□□ -0.82
SHKBP1-219ENST00000599575 TSTD3H0UI37 97 aa9.9□□□□□ -0.82
SHKBP1-219ENST00000599575 KRTAP10-8P60410 259 aa9.9□□□□□ -0.82
SHKBP1-219ENST00000599575 MT1HL1P0DM35 61 aa9.89□□□□□ -0.83
SHKBP1-219ENST00000599575 CRYGAP11844 174 aa9.89□□□□□ -0.83
SHKBP1-219ENST00000599575 SPRR4Q96PI1 79 aa9.89□□□□□ -0.83
SHKBP1-219ENST00000599575 NHP2Q9NX24 153 aaKnown RBP9.89□□□□□ -0.83
SHKBP1-219ENST00000599575 FXYD2P54710 66 aa9.88□□□□□ -0.83
SHKBP1-219ENST00000599575 BVES-AS1Q5T3Y7 98 aa9.88□□□□□ -0.83
SHKBP1-219ENST00000599575 PRO1854Q9UHT4 67 aa9.88□□□□□ -0.83
SHKBP1-219ENST00000599575 PRO1933Q9H354 126 aa9.87□□□□□ -0.83
SHKBP1-219ENST00000599575 LINC00483Q53H64 154 aa9.85□□□□□ -0.83
SHKBP1-219ENST00000599575 PRR26Q8N8Z3 221 aa9.85□□□□□ -0.83
SHKBP1-219ENST00000599575 SLC25A20O43772 301 aa9.84□□□□□ -0.83
SHKBP1-219ENST00000599575 ERC2-IT1O76042 136 aa9.84□□□□□ -0.83
SHKBP1-219ENST00000599575 M0R143 59 aa9.83□□□□□ -0.84
SHKBP1-219ENST00000599575 H0YGX0 51 aa9.82□□□□□ -0.84
SHKBP1-219ENST00000599575 A0A087X002 238 aa9.81□□□□□ -0.84
SHKBP1-219ENST00000599575 SNCGO76070 127 aa9.81□□□□□ -0.84
SHKBP1-219ENST00000599575 SPRR1BP22528 89 aa9.8□□□□□ -0.84
SHKBP1-219ENST00000599575 Q1RN00 199 aa9.8□□□□□ -0.84
SHKBP1-219ENST00000599575 GAGE2AQ6NT46 116 aa9.8□□□□□ -0.84
SHKBP1-219ENST00000599575 LINC00575Q6W349 94 aa9.8□□□□□ -0.84
SHKBP1-219ENST00000599575 H7C2G1 150 aa9.79□□□□□ -0.84
SHKBP1-219ENST00000599575 CTAG1AP78358 180 aa9.79□□□□□ -0.84
SHKBP1-219ENST00000599575 TYMSOSQ8TAI1 123 aa9.79□□□□□ -0.84
SHKBP1-219ENST00000599575 ANAPC11Q9NYG5 84 aa9.79□□□□□ -0.84
SHKBP1-219ENST00000599575 hADV29S1A0JD25 119 aa9.77□□□□□ -0.85
SHKBP1-219ENST00000599575 IGLV5-48A0A075B6I7 105 aa9.76□□□□□ -0.85
SHKBP1-219ENST00000599575 TEX49A0A1B0GTD5 131 aa9.76□□□□□ -0.85
SHKBP1-219ENST00000599575 KRTAP13-2Q52LG2 175 aa9.76□□□□□ -0.85
SHKBP1-219ENST00000599575 TNXBP22105 4242 aa9.76□□□□□ -0.85
SHKBP1-219ENST00000599575 HERC1Q15751 4861 aa9.75□□□□□ -0.85
SHKBP1-219ENST00000599575 A0A1B0GX51 115 aa9.75□□□□□ -0.85
SHKBP1-219ENST00000599575 COX6CP09669 75 aa9.75□□□□□ -0.85
SHKBP1-219ENST00000599575 ST20-AS1Q8NBB2 130 aa9.75□□□□□ -0.85
SHKBP1-219ENST00000599575 K7ERJ3 54 aa9.73□□□□□ -0.85
SHKBP1-219ENST00000599575 GHRHP01286 108 aa9.73□□□□□ -0.85
SHKBP1-219ENST00000599575 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-219ENST00000599575 SSBP3-AS1Q7Z2R9 100 aa9.73□□□□□ -0.85
SHKBP1-219ENST00000599575 PPDPFLQ8WWR9 84 aa9.73□□□□□ -0.85
SHKBP1-219ENST00000599575 LAMTOR3Q9UHA4 124 aa9.73□□□□□ -0.85
SHKBP1-219ENST00000599575 OCIAD2Q56VL3 154 aa9.72□□□□□ -0.85
SHKBP1-219ENST00000599575 TRIAP1O43715 76 aa9.71□□□□□ -0.86
SHKBP1-219ENST00000599575 PSMB2P49721 201 aa9.71□□□□□ -0.86
SHKBP1-219ENST00000599575 SPAG11AQ6PDA7 123 aa9.71□□□□□ -0.86
SHKBP1-219ENST00000599575 TSPAN13O95857 204 aa9.7□□□□□ -0.86
SHKBP1-219ENST00000599575 Q6ZQY7 126 aa9.7□□□□□ -0.86
SHKBP1-219ENST00000599575 C3orf22Q8N5N4 141 aa9.7□□□□□ -0.86
SHKBP1-219ENST00000599575 LINC01547P58512 204 aaPredicted RBP9.69□□□□□ -0.86
SHKBP1-219ENST00000599575 LINC00304Q8N9R0 145 aa9.69□□□□□ -0.86
SHKBP1-219ENST00000599575 DEFB105AQ8NG35 78 aa9.69□□□□□ -0.86
SHKBP1-219ENST00000599575 IGLV9-49A0A0B4J1Y8 123 aa9.67□□□□□ -0.86
SHKBP1-219ENST00000599575 Q8NBF4 154 aa9.67□□□□□ -0.86
SHKBP1-219ENST00000599575 MOBPQ13875 183 aa9.66□□□□□ -0.86
SHKBP1-219ENST00000599575 C4orf48Q5BLP8 95 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms