RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 S100A7L2Q5SY68 101 aa10.94□□□□□ -0.66
PNKP-213ENST00000599543 LINC00304Q8N9R0 145 aa10.94□□□□□ -0.66
PNKP-213ENST00000599543 SPANXDQ9BXN6 97 aa10.94□□□□□ -0.66
PNKP-213ENST00000599543 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
PNKP-213ENST00000599543 KCNQ1DNQ9H478 68 aa10.93□□□□□ -0.66
PNKP-213ENST00000599543 HIGD2AQ9BW72 106 aa10.92□□□□□ -0.66
PNKP-213ENST00000599543 PAM16Q9Y3D7 125 aa10.92□□□□□ -0.66
PNKP-213ENST00000599543 MUSTN1Q8IVN3 82 aa10.91□□□□□ -0.66
PNKP-213ENST00000599543 OR13C6PQ8NH95 151 aa10.91□□□□□ -0.66
PNKP-213ENST00000599543 ETDCA0A1B0GVM5 59 aa10.9□□□□□ -0.66
PNKP-213ENST00000599543 IGLV6-57P01721 117 aa10.9□□□□□ -0.66
PNKP-213ENST00000599543 JOSD1Q15040 202 aaPredicted RBP10.9□□□□□ -0.66
PNKP-213ENST00000599543 A0A0U1RQV1 116 aa10.89□□□□□ -0.67
PNKP-213ENST00000599543 SPRR1AP35321 89 aa10.89□□□□□ -0.67
PNKP-213ENST00000599543 SPATA45Q537H7 98 aa10.89□□□□□ -0.67
PNKP-213ENST00000599543 RETNLBQ9BQ08 111 aa10.89□□□□□ -0.67
PNKP-213ENST00000599543 KRTAP4-16G5E9R7 235 aaPredicted RBP10.88□□□□□ -0.67
PNKP-213ENST00000599543 LINC00337Q8N6G1 96 aa10.88□□□□□ -0.67
PNKP-213ENST00000599543 C14orf144Q96I85 54 aa10.88□□□□□ -0.67
PNKP-213ENST00000599543 TRAV23DV6A0A075B6W5 121 aa10.87□□□□□ -0.67
PNKP-213ENST00000599543 VAMP8Q9BV40 100 aa10.87□□□□□ -0.67
PNKP-213ENST00000599543 COX8AP10176 69 aa10.86□□□□□ -0.67
PNKP-213ENST00000599543 S100A12P80511 92 aa10.86□□□□□ -0.67
PNKP-213ENST00000599543 PYY3Q5JQD4 70 aa10.86□□□□□ -0.67
PNKP-213ENST00000599543 B5MCH6 92 aa10.85□□□□□ -0.67
PNKP-213ENST00000599543 IFITM1P13164 125 aa10.85□□□□□ -0.67
PNKP-213ENST00000599543 Q6ZVH6 145 aa10.83□□□□□ -0.68
PNKP-213ENST00000599543 SMCR5Q8TEV8 140 aa10.83□□□□□ -0.68
PNKP-213ENST00000599543 ZNF73O43830 326 aaPredicted RBP10.82□□□□□ -0.68
PNKP-213ENST00000599543 CTAG1AP78358 180 aa10.82□□□□□ -0.68
PNKP-213ENST00000599543 C3orf22Q8N5N4 141 aa10.82□□□□□ -0.68
PNKP-213ENST00000599543 A6NDN8 102 aa10.81□□□□□ -0.68
PNKP-213ENST00000599543 ERC2-IT1O76042 136 aa10.81□□□□□ -0.68
PNKP-213ENST00000599543 COPS9Q8WXC6 57 aa10.81□□□□□ -0.68
PNKP-213ENST00000599543 Q9BRP9 147 aa10.81□□□□□ -0.68
PNKP-213ENST00000599543 LINC00518Q8N0U6 118 aa10.8□□□□□ -0.68
PNKP-213ENST00000599543 CDIP1Q9H305 208 aa10.8□□□□□ -0.68
PNKP-213ENST00000599543 ZNF706Q9Y5V0 76 aaPredicted RBP10.8□□□□□ -0.68
PNKP-213ENST00000599543 IGLV7-46A0A075B6I9 117 aa10.79□□□□□ -0.68
PNKP-213ENST00000599543 TPRXLQ17RH7 258 aa10.79□□□□□ -0.68
PNKP-213ENST00000599543 Q6ZRX8 168 aa10.79□□□□□ -0.68
PNKP-213ENST00000599543 SPRR4Q96PI1 79 aa10.79□□□□□ -0.68
PNKP-213ENST00000599543 HIST1H4GQ99525 98 aa10.79□□□□□ -0.68
PNKP-213ENST00000599543 PPDPFQ9H3Y8 114 aa10.79□□□□□ -0.68
PNKP-213ENST00000599543 A4D1N5 150 aa10.78□□□□□ -0.68
PNKP-213ENST00000599543 DLEU1O43261 78 aa10.78□□□□□ -0.68
PNKP-213ENST00000599543 C12orf57Q99622 126 aa10.78□□□□□ -0.68
PNKP-213ENST00000599543 SLC25A34Q6PIV7 304 aa10.77□□□□□ -0.69
PNKP-213ENST00000599543 C6orf99Q4VX62 202 aa10.76□□□□□ -0.69
PNKP-213ENST00000599543 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
PNKP-213ENST00000599543 C2orf91Q6ZV80 131 aa10.76□□□□□ -0.69
PNKP-213ENST00000599543 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
PNKP-213ENST00000599543 HINT1P49773 126 aaPredicted RBP10.72□□□□□ -0.69
PNKP-213ENST00000599543 GAGE2AQ6NT46 116 aa10.72□□□□□ -0.69
PNKP-213ENST00000599543 ST20-AS1Q8NBB2 130 aa10.72□□□□□ -0.69
PNKP-213ENST00000599543 CBY1Q9Y3M2 126 aa10.72□□□□□ -0.69
PNKP-213ENST00000599543 TRAV13-2A0A0B4J235 113 aa10.71□□□□□ -0.69
PNKP-213ENST00000599543 COX7BP24311 80 aa10.71□□□□□ -0.69
PNKP-213ENST00000599543 SMIM11BQ8TCY0 68 aa10.71□□□□□ -0.69
PNKP-213ENST00000599543 Q8NBF4 154 aa10.7□□□□□ -0.7
PNKP-213ENST00000599543 HIGD1BQ9P298 99 aa10.7□□□□□ -0.7
PNKP-213ENST00000599543 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
PNKP-213ENST00000599543 FP248Q71RG6 208 aaPredicted RBP10.68□□□□□ -0.7
PNKP-213ENST00000599543 FAT4Q6V0I7 4981 aa10.67□□□□□ -0.7
PNKP-213ENST00000599543 MUC17Q685J3 4493 aa10.67□□□□□ -0.7
PNKP-213ENST00000599543 H7C2G1 150 aa10.65□□□□□ -0.7
PNKP-213ENST00000599543 LINC00483Q53H64 154 aa10.65□□□□□ -0.7
PNKP-213ENST00000599543 IGLV9-49A0A0B4J1Y8 123 aa10.63□□□□□ -0.71
PNKP-213ENST00000599543 SPINK1P00995 79 aa10.63□□□□□ -0.71
PNKP-213ENST00000599543 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
PNKP-213ENST00000599543 CFC1P0CG37 223 aa10.63□□□□□ -0.71
PNKP-213ENST00000599543 CEND1Q8N111 149 aa10.63□□□□□ -0.71
PNKP-213ENST00000599543 DHRS4-AS1Q9P1J3 65 aa10.63□□□□□ -0.71
PNKP-213ENST00000599543 A0A1B0GWB2 263 aa10.62□□□□□ -0.71
PNKP-213ENST00000599543 LCE2AQ5TA79 106 aaPredicted RBP10.62□□□□□ -0.71
PNKP-213ENST00000599543 FXYD2P54710 66 aa10.61□□□□□ -0.71
PNKP-213ENST00000599543 DEFB105AQ8NG35 78 aa10.61□□□□□ -0.71
PNKP-213ENST00000599543 PRO1933Q9H354 126 aa10.61□□□□□ -0.71
PNKP-213ENST00000599543 TRBV7-6A0A0J9YX20 115 aa10.6□□□□□ -0.71
PNKP-213ENST00000599543 MOBPQ13875 183 aa10.6□□□□□ -0.71
PNKP-213ENST00000599543 RAB37Q96AX2 223 aa10.6□□□□□ -0.71
PNKP-213ENST00000599543 TAL2Q16559 108 aa10.59□□□□□ -0.71
PNKP-213ENST00000599543 KRTAP13-3Q3SY46 172 aa10.58□□□□□ -0.72
PNKP-213ENST00000599543 UQCR10Q9UDW1 63 aa10.58□□□□□ -0.72
PNKP-213ENST00000599543 HSD52Q0P140 79 aa10.56□□□□□ -0.72
PNKP-213ENST00000599543 C9orf153Q5TBE3 101 aa10.56□□□□□ -0.72
PNKP-213ENST00000599543 SSBP3-AS1Q7Z2R9 100 aa10.56□□□□□ -0.72
PNKP-213ENST00000599543 A0A0B4J2C4 111 aa10.55□□□□□ -0.72
PNKP-213ENST00000599543 RPS29P62273 56 aaKnown RBP10.55□□□□□ -0.72
PNKP-213ENST00000599543 VAMP3Q15836 100 aa10.55□□□□□ -0.72
PNKP-213ENST00000599543 KRTAP9-2Q9BYQ4 174 aa10.55□□□□□ -0.72
PNKP-213ENST00000599543 LOC105371267A0A1B0GV96 52 aa10.54□□□□□ -0.72
PNKP-213ENST00000599543 K7ERJ3 54 aa10.53□□□□□ -0.72
PNKP-213ENST00000599543 Q1RN00 199 aa10.53□□□□□ -0.72
PNKP-213ENST00000599543 LINC00575Q6W349 94 aa10.53□□□□□ -0.72
PNKP-213ENST00000599543 NHP2Q9NX24 153 aaKnown RBP10.53□□□□□ -0.72
PNKP-213ENST00000599543 TMEM238LA0A1B0GVL6 79 aa10.52□□□□□ -0.73
PNKP-213ENST00000599543 A6NJY4 79 aa10.52□□□□□ -0.73
PNKP-213ENST00000599543 SPRR1BP22528 89 aa10.52□□□□□ -0.73
PNKP-213ENST00000599543 LINC01547P58512 204 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms