RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 ZNF706Q9Y5V0 76 aaPredicted RBP6.95□□□□□ -1.3
LIG1-217ENST00000599165 TIMM17BO60830 172 aa6.94□□□□□ -1.3
LIG1-217ENST00000599165 KRTDAPP60985 99 aa6.94□□□□□ -1.3
LIG1-217ENST00000599165 ANKRD39Q53RE8 183 aa6.94□□□□□ -1.3
LIG1-217ENST00000599165 TRAV23DV6A0A075B6W5 121 aa6.93□□□□□ -1.3
LIG1-217ENST00000599165 ZNF815PA8K554 130 aa6.93□□□□□ -1.3
LIG1-217ENST00000599165 CTAG1AP78358 180 aa6.93□□□□□ -1.3
LIG1-217ENST00000599165 Q8NBF4 154 aa6.93□□□□□ -1.3
LIG1-217ENST00000599165 ZNF73O43830 326 aaPredicted RBP6.92□□□□□ -1.3
LIG1-217ENST00000599165 S100A7L2Q5SY68 101 aa6.92□□□□□ -1.3
LIG1-217ENST00000599165 GAGE2AQ6NT46 116 aa6.92□□□□□ -1.3
LIG1-217ENST00000599165 SPANXCQ9NY87 97 aa6.92□□□□□ -1.3
LIG1-217ENST00000599165 S100A12P80511 92 aa6.9□□□□□ -1.3
LIG1-217ENST00000599165 SPAG11AQ6PDA7 123 aa6.9□□□□□ -1.3
LIG1-217ENST00000599165 ATOH7Q8N100 152 aa6.9□□□□□ -1.3
LIG1-217ENST00000599165 ST20-AS1Q8NBB2 130 aa6.9□□□□□ -1.3
LIG1-217ENST00000599165 IGLV7-46A0A075B6I9 117 aa6.89□□□□□ -1.31
LIG1-217ENST00000599165 TPRXLQ17RH7 258 aa6.89□□□□□ -1.31
LIG1-217ENST00000599165 MOBPQ13875 183 aa6.88□□□□□ -1.31
LIG1-217ENST00000599165 PCP2Q8IVA1 136 aa6.88□□□□□ -1.31
LIG1-217ENST00000599165 SPANXDQ9BXN6 97 aa6.88□□□□□ -1.31
LIG1-217ENST00000599165 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
LIG1-217ENST00000599165 IGLV9-49A0A0B4J1Y8 123 aa6.87□□□□□ -1.31
LIG1-217ENST00000599165 HIST3H2BBQ8N257 126 aa6.86□□□□□ -1.31
LIG1-217ENST00000599165 C20orf202A1L168 122 aa6.85□□□□□ -1.31
LIG1-217ENST00000599165 JOSD1Q15040 202 aaPredicted RBP6.85□□□□□ -1.31
LIG1-217ENST00000599165 OR13C6PQ8NH95 151 aa6.85□□□□□ -1.31
LIG1-217ENST00000599165 HIST1H2BLQ99880 126 aa6.85□□□□□ -1.31
LIG1-217ENST00000599165 SPINK1P00995 79 aa6.84□□□□□ -1.31
LIG1-217ENST00000599165 SPRR1BP22528 89 aa6.84□□□□□ -1.31
LIG1-217ENST00000599165 SSBP3-AS1Q7Z2R9 100 aa6.84□□□□□ -1.31
LIG1-217ENST00000599165 ELOF1P60002 83 aaKnown RBP6.83□□□□□ -1.32
LIG1-217ENST00000599165 KRTAP13-3Q3SY46 172 aa6.83□□□□□ -1.32
LIG1-217ENST00000599165 C6orf99Q4VX62 202 aa6.83□□□□□ -1.32
LIG1-217ENST00000599165 C4orf48Q5BLP8 95 aa6.83□□□□□ -1.32
LIG1-217ENST00000599165 SCGB1D4Q6XE38 83 aa6.83□□□□□ -1.32
LIG1-217ENST00000599165 FP248Q71RG6 208 aaPredicted RBP6.83□□□□□ -1.32
LIG1-217ENST00000599165 Q8N377 158 aa6.83□□□□□ -1.32
LIG1-217ENST00000599165 C5orf52A6NGY3 159 aa6.82□□□□□ -1.32
LIG1-217ENST00000599165 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
LIG1-217ENST00000599165 LINC00518Q8N0U6 118 aa6.82□□□□□ -1.32
LIG1-217ENST00000599165 MUSTN1Q8IVN3 82 aa6.81□□□□□ -1.32
LIG1-217ENST00000599165 CDIP1Q9H305 208 aa6.81□□□□□ -1.32
LIG1-217ENST00000599165 CBY1Q9Y3M2 126 aa6.81□□□□□ -1.32
LIG1-217ENST00000599165 IFITM1P13164 125 aa6.8□□□□□ -1.32
LIG1-217ENST00000599165 S100A1P23297 94 aa6.8□□□□□ -1.32
LIG1-217ENST00000599165 COX7BP24311 80 aa6.8□□□□□ -1.32
LIG1-217ENST00000599165 DHRS4-AS1Q9P1J3 65 aa6.8□□□□□ -1.32
LIG1-217ENST00000599165 HINT1P49773 126 aaPredicted RBP6.79□□□□□ -1.32
LIG1-217ENST00000599165 C9orf153Q5TBE3 101 aa6.79□□□□□ -1.32
LIG1-217ENST00000599165 Q6ZVH6 145 aa6.79□□□□□ -1.32
LIG1-217ENST00000599165 LINC01547P58512 204 aaPredicted RBP6.78□□□□□ -1.32
LIG1-217ENST00000599165 TRBV7-6A0A0J9YX20 115 aa6.77□□□□□ -1.33
LIG1-217ENST00000599165 AKR1D1P51857 326 aa6.77□□□□□ -1.33
LIG1-217ENST00000599165 SNRPEP62304 92 aaKnown RBP6.77□□□□□ -1.33
LIG1-217ENST00000599165 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
LIG1-217ENST00000599165 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
LIG1-217ENST00000599165 A6NDN8 102 aa6.75□□□□□ -1.33
LIG1-217ENST00000599165 SLC25A20O43772 301 aa6.75□□□□□ -1.33
LIG1-217ENST00000599165 S100A2P29034 98 aa6.75□□□□□ -1.33
LIG1-217ENST00000599165 SMIM11BQ8TCY0 68 aa6.75□□□□□ -1.33
LIG1-217ENST00000599165 IGLV5-48A0A075B6I7 105 aa6.74□□□□□ -1.33
LIG1-217ENST00000599165 A0A1B0GWB2 263 aa6.74□□□□□ -1.33
LIG1-217ENST00000599165 COPS9Q8WXC6 57 aa6.74□□□□□ -1.33
LIG1-217ENST00000599165 KRTAP4-1Q9BYQ7 146 aa6.74□□□□□ -1.33
LIG1-217ENST00000599165 Q1RN00 199 aa6.73□□□□□ -1.33
LIG1-217ENST00000599165 DEFB105AQ8NG35 78 aa6.73□□□□□ -1.33
LIG1-217ENST00000599165 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
LIG1-217ENST00000599165 LAMTOR3Q9UHA4 124 aa6.72□□□□□ -1.33
LIG1-217ENST00000599165 TRAV13-2A0A0B4J235 113 aa6.71□□□□□ -1.34
LIG1-217ENST00000599165 A0A0G2JQZ4 141 aa6.71□□□□□ -1.34
LIG1-217ENST00000599165 TEX49A0A1B0GTD5 131 aa6.71□□□□□ -1.34
LIG1-217ENST00000599165 A4D1N5 150 aa6.71□□□□□ -1.34
LIG1-217ENST00000599165 S100A6P06703 90 aa6.71□□□□□ -1.34
LIG1-217ENST00000599165 TAL2Q16559 108 aa6.71□□□□□ -1.34
LIG1-217ENST00000599165 SLC25A34Q6PIV7 304 aa6.71□□□□□ -1.34
LIG1-217ENST00000599165 HRCT1Q6UXD1 115 aa6.71□□□□□ -1.34
LIG1-217ENST00000599165 XP32Q5T750 250 aa6.69□□□□□ -1.34
LIG1-217ENST00000599165 HSBP1L1C9JCN9 74 aa6.68□□□□□ -1.34
LIG1-217ENST00000599165 A0A0U1RQV1 116 aa6.67□□□□□ -1.34
LIG1-217ENST00000599165 SCGB1D1O95968 90 aa6.67□□□□□ -1.34
LIG1-217ENST00000599165 COX8AP10176 69 aa6.67□□□□□ -1.34
LIG1-217ENST00000599165 CD164Q04900 197 aa6.67□□□□□ -1.34
LIG1-217ENST00000599165 PRO1933Q9H354 126 aa6.67□□□□□ -1.34
LIG1-217ENST00000599165 LINC00575Q6W349 94 aa6.66□□□□□ -1.34
LIG1-217ENST00000599165 H7C2G1 150 aa6.65□□□□□ -1.34
LIG1-217ENST00000599165 DLEU1O43261 78 aa6.65□□□□□ -1.34
LIG1-217ENST00000599165 Q5XG85 94 aa6.65□□□□□ -1.34
LIG1-217ENST00000599165 C12orf57Q99622 126 aa6.65□□□□□ -1.34
LIG1-217ENST00000599165 LIMD2Q9BT23 127 aa6.65□□□□□ -1.34
LIG1-217ENST00000599165 NHP2Q9NX24 153 aaKnown RBP6.63□□□□□ -1.35
LIG1-217ENST00000599165 SEC61BP60468 96 aaKnown RBP6.62□□□□□ -1.35
LIG1-217ENST00000599165 C1orf195Q5TG92 126 aa6.62□□□□□ -1.35
LIG1-217ENST00000599165 Q6ZQY7 126 aa6.62□□□□□ -1.35
LIG1-217ENST00000599165 C2orf91Q6ZV80 131 aa6.62□□□□□ -1.35
LIG1-217ENST00000599165 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
LIG1-217ENST00000599165 HIST1H4GQ99525 98 aa6.61□□□□□ -1.35
LIG1-217ENST00000599165 hADV29S1A0JD25 119 aa6.6□□□□□ -1.35
LIG1-217ENST00000599165 C9orf92A6NGG3 77 aa6.6□□□□□ -1.35
LIG1-217ENST00000599165 CFC1BP0CG36 223 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms