RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 S100A7L2Q5SY68 101 aa5.64□□□□□ -1.51
VRK3-215ENST00000599138 Q6ZRX8 168 aa5.64□□□□□ -1.51
VRK3-215ENST00000599138 C3orf22Q8N5N4 141 aa5.64□□□□□ -1.51
VRK3-215ENST00000599138 HIST1H2BLQ99880 126 aa5.64□□□□□ -1.51
VRK3-215ENST00000599138 TRAV23DV6A0A075B6W5 121 aa5.63□□□□□ -1.51
VRK3-215ENST00000599138 CTAG1AP78358 180 aa5.63□□□□□ -1.51
VRK3-215ENST00000599138 LINC00483Q53H64 154 aa5.63□□□□□ -1.51
VRK3-215ENST00000599138 ATOH7Q8N100 152 aa5.63□□□□□ -1.51
VRK3-215ENST00000599138 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
VRK3-215ENST00000599138 Q9BRP9 147 aa5.63□□□□□ -1.51
VRK3-215ENST00000599138 ZNF73O43830 326 aaPredicted RBP5.62□□□□□ -1.51
VRK3-215ENST00000599138 ERC2-IT1O76042 136 aa5.62□□□□□ -1.51
VRK3-215ENST00000599138 SPANXDQ9BXN6 97 aa5.62□□□□□ -1.51
VRK3-215ENST00000599138 PPDPFQ9H3Y8 114 aa5.62□□□□□ -1.51
VRK3-215ENST00000599138 SNRPEP62304 92 aaKnown RBP5.61□□□□□ -1.51
VRK3-215ENST00000599138 PRR4Q16378 134 aa5.61□□□□□ -1.51
VRK3-215ENST00000599138 PCP2Q8IVA1 136 aa5.61□□□□□ -1.51
VRK3-215ENST00000599138 S100A2P29034 98 aa5.6□□□□□ -1.51
VRK3-215ENST00000599138 SCGB1D4Q6XE38 83 aa5.6□□□□□ -1.51
VRK3-215ENST00000599138 LINC00518Q8N0U6 118 aa5.6□□□□□ -1.51
VRK3-215ENST00000599138 CBY1Q9Y3M2 126 aa5.6□□□□□ -1.51
VRK3-215ENST00000599138 IFITM1P13164 125 aa5.59□□□□□ -1.51
VRK3-215ENST00000599138 JOSD1Q15040 202 aaPredicted RBP5.59□□□□□ -1.51
VRK3-215ENST00000599138 GAGE2AQ6NT46 116 aa5.59□□□□□ -1.51
VRK3-215ENST00000599138 Q6ZVH6 145 aa5.59□□□□□ -1.51
VRK3-215ENST00000599138 C5orf52A6NGY3 159 aa5.58□□□□□ -1.52
VRK3-215ENST00000599138 S100A6P06703 90 aa5.58□□□□□ -1.52
VRK3-215ENST00000599138 SPAG11AQ6PDA7 123 aa5.58□□□□□ -1.52
VRK3-215ENST00000599138 OR13C6PQ8NH95 151 aa5.58□□□□□ -1.52
VRK3-215ENST00000599138 COPS9Q8WXC6 57 aa5.58□□□□□ -1.52
VRK3-215ENST00000599138 HINT1P49773 126 aaPredicted RBP5.56□□□□□ -1.52
VRK3-215ENST00000599138 MUSTN1Q8IVN3 82 aa5.56□□□□□ -1.52
VRK3-215ENST00000599138 Q8NBF4 154 aa5.56□□□□□ -1.52
VRK3-215ENST00000599138 ELOF1P60002 83 aaKnown RBP5.55□□□□□ -1.52
VRK3-215ENST00000599138 SSBP3-AS1Q7Z2R9 100 aa5.55□□□□□ -1.52
VRK3-215ENST00000599138 ST20-AS1Q8NBB2 130 aa5.55□□□□□ -1.52
VRK3-215ENST00000599138 RETNLBQ9BQ08 111 aa5.55□□□□□ -1.52
VRK3-215ENST00000599138 DHRS4-AS1Q9P1J3 65 aa5.55□□□□□ -1.52
VRK3-215ENST00000599138 TRBV7-6A0A0J9YX20 115 aa5.54□□□□□ -1.52
VRK3-215ENST00000599138 HSBP1L1C9JCN9 74 aa5.54□□□□□ -1.52
VRK3-215ENST00000599138 SPRR1BP22528 89 aa5.54□□□□□ -1.52
VRK3-215ENST00000599138 C6orf99Q4VX62 202 aa5.54□□□□□ -1.52
VRK3-215ENST00000599138 IGLV9-49A0A0B4J1Y8 123 aa5.53□□□□□ -1.52
VRK3-215ENST00000599138 SPINK1P00995 79 aa5.53□□□□□ -1.52
VRK3-215ENST00000599138 COX7BP24311 80 aa5.53□□□□□ -1.52
VRK3-215ENST00000599138 MOBPQ13875 183 aa5.53□□□□□ -1.52
VRK3-215ENST00000599138 C4orf48Q5BLP8 95 aa5.53□□□□□ -1.52
VRK3-215ENST00000599138 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
VRK3-215ENST00000599138 MUC2Q02817 5179 aa5.51□□□□□ -1.53
VRK3-215ENST00000599138 IGLV7-46A0A075B6I9 117 aa5.51□□□□□ -1.53
VRK3-215ENST00000599138 TRAV13-2A0A0B4J235 113 aa5.51□□□□□ -1.53
VRK3-215ENST00000599138 A6NDN8 102 aa5.51□□□□□ -1.53
VRK3-215ENST00000599138 SCGB1D1O95968 90 aa5.51□□□□□ -1.53
VRK3-215ENST00000599138 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
VRK3-215ENST00000599138 A0A1B0GWB2 263 aa5.5□□□□□ -1.53
VRK3-215ENST00000599138 FP248Q71RG6 208 aaPredicted RBP5.5□□□□□ -1.53
VRK3-215ENST00000599138 DLEU1O43261 78 aa5.49□□□□□ -1.53
VRK3-215ENST00000599138 COX8AP10176 69 aa5.49□□□□□ -1.53
VRK3-215ENST00000599138 SMIM11BQ8TCY0 68 aa5.49□□□□□ -1.53
VRK3-215ENST00000599138 A4D1N5 150 aa5.48□□□□□ -1.53
VRK3-215ENST00000599138 LINC01547P58512 204 aaPredicted RBP5.48□□□□□ -1.53
VRK3-215ENST00000599138 C9orf153Q5TBE3 101 aa5.48□□□□□ -1.53
VRK3-215ENST00000599138 SLC25A34Q6PIV7 304 aa5.48□□□□□ -1.53
VRK3-215ENST00000599138 Q8N377 158 aa5.48□□□□□ -1.53
VRK3-215ENST00000599138 MUC17Q685J3 4493 aa5.47□□□□□ -1.53
VRK3-215ENST00000599138 IGLV5-48A0A075B6I7 105 aa5.47□□□□□ -1.53
VRK3-215ENST00000599138 LAMTOR3Q9UHA4 124 aa5.47□□□□□ -1.53
VRK3-215ENST00000599138 TEX49A0A1B0GTD5 131 aa5.46□□□□□ -1.54
VRK3-215ENST00000599138 SLC25A20O43772 301 aa5.46□□□□□ -1.54
VRK3-215ENST00000599138 SMIM29Q86T20 159 aa5.46□□□□□ -1.54
VRK3-215ENST00000599138 TAL2Q16559 108 aa5.45□□□□□ -1.54
VRK3-215ENST00000599138 KRTAP13-3Q3SY46 172 aa5.45□□□□□ -1.54
VRK3-215ENST00000599138 CDIP1Q9H305 208 aa5.45□□□□□ -1.54
VRK3-215ENST00000599138 DEFB105AQ8NG35 78 aa5.44□□□□□ -1.54
VRK3-215ENST00000599138 C14orf144Q96I85 54 aa5.44□□□□□ -1.54
VRK3-215ENST00000599138 HIST1H4GQ99525 98 aa5.44□□□□□ -1.54
VRK3-215ENST00000599138 NHP2Q9NX24 153 aaKnown RBP5.44□□□□□ -1.54
VRK3-215ENST00000599138 HIGD1BQ9P298 99 aa5.44□□□□□ -1.54
VRK3-215ENST00000599138 Q1RN00 199 aa5.43□□□□□ -1.54
VRK3-215ENST00000599138 SPATA45Q537H7 98 aa5.43□□□□□ -1.54
VRK3-215ENST00000599138 LINC00575Q6W349 94 aa5.43□□□□□ -1.54
VRK3-215ENST00000599138 PAM16Q9Y3D7 125 aa5.43□□□□□ -1.54
VRK3-215ENST00000599138 CD164Q04900 197 aa5.42□□□□□ -1.54
VRK3-215ENST00000599138 VAMP3Q15836 100 aa5.42□□□□□ -1.54
VRK3-215ENST00000599138 C2orf91Q6ZV80 131 aa5.42□□□□□ -1.54
VRK3-215ENST00000599138 VAMP8Q9BV40 100 aa5.42□□□□□ -1.54
VRK3-215ENST00000599138 C12orf57Q99622 126 aa5.41□□□□□ -1.54
VRK3-215ENST00000599138 PRO1933Q9H354 126 aa5.41□□□□□ -1.54
VRK3-215ENST00000599138 CFC1BP0CG36 223 aa5.4□□□□□ -1.54
VRK3-215ENST00000599138 CFC1P0CG37 223 aa5.4□□□□□ -1.54
VRK3-215ENST00000599138 Q5XG85 94 aa5.4□□□□□ -1.54
VRK3-215ENST00000599138 hADV29S1A0JD25 119 aa5.39□□□□□ -1.55
VRK3-215ENST00000599138 PYY3Q5JQD4 70 aa5.39□□□□□ -1.55
VRK3-215ENST00000599138 HRCT1Q6UXD1 115 aa5.39□□□□□ -1.55
VRK3-215ENST00000599138 LIMD2Q9BT23 127 aa5.39□□□□□ -1.55
VRK3-215ENST00000599138 A0A0B4J2C4 111 aa5.38□□□□□ -1.55
VRK3-215ENST00000599138 BVES-AS1Q5T3Y7 98 aa5.38□□□□□ -1.55
VRK3-215ENST00000599138 Q6ZQY7 126 aa5.38□□□□□ -1.55
VRK3-215ENST00000599138 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
VRK3-215ENST00000599138 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms