RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 MRPL51Q4U2R6 128 aaKnown RBP1.91□□□□□ -2.1
HERC3-213ENST00000598772 ALKAL2Q6UX46 152 aa1.91□□□□□ -2.1
HERC3-213ENST00000598772 KRTAP9-6A8MVA2 160 aa1.9□□□□□ -2.11
HERC3-213ENST00000598772 D6R8Y8 96 aa1.9□□□□□ -2.11
HERC3-213ENST00000598772 SSNA1O43805 119 aa1.9□□□□□ -2.11
HERC3-213ENST00000598772 CCL20P78556 96 aa1.9□□□□□ -2.11
HERC3-213ENST00000598772 FAM213BQ8TBF2 198 aa1.9□□□□□ -2.11
HERC3-213ENST00000598772 AMELXQ99217 191 aa1.9□□□□□ -2.11
HERC3-213ENST00000598772 GNG13Q9P2W3 67 aa1.9□□□□□ -2.11
HERC3-213ENST00000598772 FAM240BA0A1B0GVZ2 78 aa1.89□□□□□ -2.11
HERC3-213ENST00000598772 PLA2G10O15496 165 aa1.89□□□□□ -2.11
HERC3-213ENST00000598772 DDTP30046 118 aa1.89□□□□□ -2.11
HERC3-213ENST00000598772 RIGQ13278 110 aa1.89□□□□□ -2.11
HERC3-213ENST00000598772 COX17Q14061 63 aa1.89□□□□□ -2.11
HERC3-213ENST00000598772 OCC1Q8TAD7 63 aa1.89□□□□□ -2.11
HERC3-213ENST00000598772 CYSLTR1Q9Y271 337 aa1.89□□□□□ -2.11
HERC3-213ENST00000598772 HIGD1CA8MV81 97 aa1.88□□□□□ -2.11
HERC3-213ENST00000598772 K7EN84 100 aa1.88□□□□□ -2.11
HERC3-213ENST00000598772 NPYP01303 97 aa1.88□□□□□ -2.11
HERC3-213ENST00000598772 IL7P13232 177 aa1.88□□□□□ -2.11
HERC3-213ENST00000598772 DSCR10P59022 87 aa1.88□□□□□ -2.11
HERC3-213ENST00000598772 LINC00299Q6ZSB3 139 aa1.88□□□□□ -2.11
HERC3-213ENST00000598772 TRBV24-1A0A075B6N3 115 aa1.87□□□□□ -2.11
HERC3-213ENST00000598772 LINC00862A6NCI5 91 aa1.87□□□□□ -2.11
HERC3-213ENST00000598772 HMSDA8MTL9 139 aa1.87□□□□□ -2.11
HERC3-213ENST00000598772 H3BRM9 83 aa1.87□□□□□ -2.11
HERC3-213ENST00000598772 HINT1P49773 126 aaPredicted RBP1.87□□□□□ -2.11
HERC3-213ENST00000598772 RPL23P62829 140 aaKnown RBP1.87□□□□□ -2.11
HERC3-213ENST00000598772 PAPPA-AS1Q5QFB9 102 aa1.87□□□□□ -2.11
HERC3-213ENST00000598772 S100A7L2Q5SY68 101 aa1.87□□□□□ -2.11
HERC3-213ENST00000598772 FAM104BQ5XKR9 115 aa1.87□□□□□ -2.11
HERC3-213ENST00000598772 C11orf52Q96A22 123 aa1.87□□□□□ -2.11
HERC3-213ENST00000598772 SMIM12Q96EX1 92 aa1.87□□□□□ -2.11
HERC3-213ENST00000598772 FAM218AQ96MZ4 157 aa1.87□□□□□ -2.11
HERC3-213ENST00000598772 TINCRA0A1B0GVN0 87 aa1.86□□□□□ -2.11
HERC3-213ENST00000598772 SMIM13P0DJ93 91 aa1.86□□□□□ -2.11
HERC3-213ENST00000598772 SPRR1BP22528 89 aa1.86□□□□□ -2.11
HERC3-213ENST00000598772 ZNF345Q14585 488 aa1.86□□□□□ -2.11
HERC3-213ENST00000598772 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
HERC3-213ENST00000598772 TRAV23DV6A0A075B6W5 121 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 C5orf52A6NGY3 159 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 IGIPA6NJ69 53 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 LST1O00453 97 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 NDUFA6P56556 154 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 MEIG1Q5JSS6 88 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 SOSTDC1Q6X4U4 206 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 TMEM136Q6ZRR5 245 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 MBD3L1Q8WWY6 194 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 CST9LQ9H4G1 147 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 NXT2Q9NPJ8 142 aaKnown RBP1.85□□□□□ -2.11
HERC3-213ENST00000598772 BATF3Q9NR55 127 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
HERC3-213ENST00000598772 TEX49A0A1B0GTD5 131 aa1.84□□□□□ -2.11
HERC3-213ENST00000598772 A0A1B0GWB2 263 aa1.84□□□□□ -2.11
HERC3-213ENST00000598772 ZNF73O43830 326 aaPredicted RBP1.84□□□□□ -2.11
HERC3-213ENST00000598772 CEBPGP53567 150 aa1.84□□□□□ -2.11
HERC3-213ENST00000598772 SPINK7P58062 85 aa1.84□□□□□ -2.11
HERC3-213ENST00000598772 FA2HQ7L5A8 372 aa1.84□□□□□ -2.11
HERC3-213ENST00000598772 WFDC13Q8IUB5 93 aa1.84□□□□□ -2.11
HERC3-213ENST00000598772 MIR7-3HGQ8N6C7 128 aa1.84□□□□□ -2.11
HERC3-213ENST00000598772 SPRR2GQ9BYE4 73 aa1.84□□□□□ -2.11
HERC3-213ENST00000598772 MANBALQ9NQG1 85 aa1.84□□□□□ -2.11
HERC3-213ENST00000598772 PRO2289Q9P1D8 64 aa1.84□□□□□ -2.11
HERC3-213ENST00000598772 PDE6DO43924 150 aa1.83□□□□□ -2.12
HERC3-213ENST00000598772 PRELID3AQ96N28 172 aa1.83□□□□□ -2.12
HERC3-213ENST00000598772 SCGB3A1Q96QR1 104 aa1.83□□□□□ -2.12
HERC3-213ENST00000598772 DHRS4-AS1Q9P1J3 65 aa1.83□□□□□ -2.12
HERC3-213ENST00000598772 IGLV5-45A0A087WSX0 123 aa1.82□□□□□ -2.12
HERC3-213ENST00000598772 H1FX-AS1Q4G0G2 97 aa1.82□□□□□ -2.12
HERC3-213ENST00000598772 ORMDL2Q53FV1 153 aa1.82□□□□□ -2.12
HERC3-213ENST00000598772 MAP1LC3AQ9H492 121 aa1.82□□□□□ -2.12
HERC3-213ENST00000598772 F8W036 122 aa1.81□□□□□ -2.12
HERC3-213ENST00000598772 ADCYAP1P18509 176 aa1.81□□□□□ -2.12
HERC3-213ENST00000598772 LINC00313P59037 77 aa1.81□□□□□ -2.12
HERC3-213ENST00000598772 Q5BKY6 102 aa1.81□□□□□ -2.12
HERC3-213ENST00000598772 CT83Q5H943 113 aa1.81□□□□□ -2.12
HERC3-213ENST00000598772 ORMDL3Q8N138 153 aa1.81□□□□□ -2.12
HERC3-213ENST00000598772 IGLV5-39A0A0G2JS06 123 aa1.8□□□□□ -2.12
HERC3-213ENST00000598772 TRBV7-7A0A0K0K1E9 115 aa1.8□□□□□ -2.12
HERC3-213ENST00000598772 F8WEM9 126 aa1.8□□□□□ -2.12
HERC3-213ENST00000598772 PPBPP02775 128 aa1.8□□□□□ -2.12
HERC3-213ENST00000598772 C5orf47Q569G3 176 aa1.8□□□□□ -2.12
HERC3-213ENST00000598772 MRPL54Q6P161 138 aaKnown RBP1.8□□□□□ -2.12
HERC3-213ENST00000598772 Q8N8P6 123 aa1.8□□□□□ -2.12
HERC3-213ENST00000598772 OR13C6PQ8NH95 151 aa1.8□□□□□ -2.12
HERC3-213ENST00000598772 TRBV10-2A0A0K0K1G8 114 aa1.79□□□□□ -2.12
HERC3-213ENST00000598772 UMAD1C9J7I0 102 aa1.79□□□□□ -2.12
HERC3-213ENST00000598772 TEX46H3BTG2 121 aa1.79□□□□□ -2.12
HERC3-213ENST00000598772 TMEM170BQ5T4T1 132 aa1.79□□□□□ -2.12
HERC3-213ENST00000598772 SFTA2Q6UW10 78 aa1.79□□□□□ -2.12
HERC3-213ENST00000598772 ERASQ7Z444 233 aa1.79□□□□□ -2.12
HERC3-213ENST00000598772 NAT8BQ9UHF3 227 aa1.79□□□□□ -2.12
HERC3-213ENST00000598772 COLCA2A8K830 154 aa1.78□□□□□ -2.12
HERC3-213ENST00000598772 ZNF22P17026 224 aaPredicted RBP1.78□□□□□ -2.12
HERC3-213ENST00000598772 COX7BP24311 80 aa1.78□□□□□ -2.12
HERC3-213ENST00000598772 G0S2P27469 103 aa1.78□□□□□ -2.12
HERC3-213ENST00000598772 LCA10Q71F78 164 aa1.78□□□□□ -2.12
HERC3-213ENST00000598772 TOMM6Q96B49 74 aa1.78□□□□□ -2.12
HERC3-213ENST00000598772 SIGMAR1Q99720 223 aa1.78□□□□□ -2.12
HERC3-213ENST00000598772 MIEN1Q9BRT3 115 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms