RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 Q6ZRX8 168 aa8.48□□□□□ -1.05
XRCC1-208ENST00000598422 RETNLBQ9BQ08 111 aa8.48□□□□□ -1.05
XRCC1-208ENST00000598422 CTAG1AP78358 180 aa8.47□□□□□ -1.05
XRCC1-208ENST00000598422 JOSD1Q15040 202 aaPredicted RBP8.47□□□□□ -1.05
XRCC1-208ENST00000598422 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
XRCC1-208ENST00000598422 ZNF73O43830 326 aaPredicted RBP8.46□□□□□ -1.06
XRCC1-208ENST00000598422 EIF4EBP3O60516 100 aaPredicted RBP8.46□□□□□ -1.06
XRCC1-208ENST00000598422 HINT1P49773 126 aaPredicted RBP8.46□□□□□ -1.06
XRCC1-208ENST00000598422 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.06
XRCC1-208ENST00000598422 LITAFQ99732 161 aa8.46□□□□□ -1.06
XRCC1-208ENST00000598422 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
XRCC1-208ENST00000598422 LINC00483Q53H64 154 aa8.45□□□□□ -1.06
XRCC1-208ENST00000598422 SCGB1D4Q6XE38 83 aa8.45□□□□□ -1.06
XRCC1-208ENST00000598422 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
XRCC1-208ENST00000598422 ERC2-IT1O76042 136 aa8.44□□□□□ -1.06
XRCC1-208ENST00000598422 Q8NBF4 154 aa8.44□□□□□ -1.06
XRCC1-208ENST00000598422 Q9BRP9 147 aa8.44□□□□□ -1.06
XRCC1-208ENST00000598422 TTTY13Q9BZ97 58 aa8.44□□□□□ -1.06
XRCC1-208ENST00000598422 AKR1D1P51857 326 aa8.43□□□□□ -1.06
XRCC1-208ENST00000598422 MOBPQ13875 183 aa8.42□□□□□ -1.06
XRCC1-208ENST00000598422 IGLV7-46A0A075B6I9 117 aa8.41□□□□□ -1.06
XRCC1-208ENST00000598422 IGLV9-49A0A0B4J1Y8 123 aa8.41□□□□□ -1.06
XRCC1-208ENST00000598422 ATOH7Q8N100 152 aa8.41□□□□□ -1.06
XRCC1-208ENST00000598422 SPANXDQ9BXN6 97 aa8.41□□□□□ -1.06
XRCC1-208ENST00000598422 COPS9Q8WXC6 57 aa8.4□□□□□ -1.06
XRCC1-208ENST00000598422 ANKRD39Q53RE8 183 aa8.39□□□□□ -1.07
XRCC1-208ENST00000598422 LINC00518Q8N0U6 118 aa8.39□□□□□ -1.07
XRCC1-208ENST00000598422 CDIP1Q9H305 208 aa8.39□□□□□ -1.07
XRCC1-208ENST00000598422 SPINK1P00995 79 aa8.38□□□□□ -1.07
XRCC1-208ENST00000598422 S100A2P29034 98 aa8.38□□□□□ -1.07
XRCC1-208ENST00000598422 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
XRCC1-208ENST00000598422 C9orf153Q5TBE3 101 aa8.38□□□□□ -1.07
XRCC1-208ENST00000598422 S100A1P23297 94 aa8.36□□□□□ -1.07
XRCC1-208ENST00000598422 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
XRCC1-208ENST00000598422 SSBP3-AS1Q7Z2R9 100 aa8.36□□□□□ -1.07
XRCC1-208ENST00000598422 DHRS4-AS1Q9P1J3 65 aa8.36□□□□□ -1.07
XRCC1-208ENST00000598422 C5orf52A6NGY3 159 aa8.35□□□□□ -1.07
XRCC1-208ENST00000598422 IFITM1P13164 125 aa8.35□□□□□ -1.07
XRCC1-208ENST00000598422 ST20-AS1Q8NBB2 130 aa8.35□□□□□ -1.07
XRCC1-208ENST00000598422 COX7BP24311 80 aa8.34□□□□□ -1.07
XRCC1-208ENST00000598422 SNRPEP62304 92 aaKnown RBP8.34□□□□□ -1.07
XRCC1-208ENST00000598422 C6orf99Q4VX62 202 aa8.34□□□□□ -1.07
XRCC1-208ENST00000598422 Q6ZVH6 145 aa8.34□□□□□ -1.07
XRCC1-208ENST00000598422 PCP2Q8IVA1 136 aa8.34□□□□□ -1.07
XRCC1-208ENST00000598422 HSBP1L1C9JCN9 74 aa8.33□□□□□ -1.08
XRCC1-208ENST00000598422 S100A6P06703 90 aa8.33□□□□□ -1.08
XRCC1-208ENST00000598422 SLC25A34Q6PIV7 304 aa8.33□□□□□ -1.08
XRCC1-208ENST00000598422 HIST3H2BBQ8N257 126 aa8.33□□□□□ -1.08
XRCC1-208ENST00000598422 A6NDN8 102 aa8.32□□□□□ -1.08
XRCC1-208ENST00000598422 ELOF1P60002 83 aaKnown RBP8.32□□□□□ -1.08
XRCC1-208ENST00000598422 HIST1H2BLQ99880 126 aa8.32□□□□□ -1.08
XRCC1-208ENST00000598422 A0A0U1RQV1 116 aa8.31□□□□□ -1.08
XRCC1-208ENST00000598422 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
XRCC1-208ENST00000598422 MUSTN1Q8IVN3 82 aa8.3□□□□□ -1.08
XRCC1-208ENST00000598422 LAMTOR3Q9UHA4 124 aa8.29□□□□□ -1.08
XRCC1-208ENST00000598422 SLC25A20O43772 301 aa8.28□□□□□ -1.08
XRCC1-208ENST00000598422 TRAV13-2A0A0B4J235 113 aa8.27□□□□□ -1.09
XRCC1-208ENST00000598422 TRBV7-6A0A0J9YX20 115 aa8.27□□□□□ -1.09
XRCC1-208ENST00000598422 A0A1B0GWB2 263 aa8.27□□□□□ -1.09
XRCC1-208ENST00000598422 SPRR1BP22528 89 aa8.27□□□□□ -1.09
XRCC1-208ENST00000598422 TAL2Q16559 108 aa8.27□□□□□ -1.09
XRCC1-208ENST00000598422 Q8N377 158 aa8.27□□□□□ -1.09
XRCC1-208ENST00000598422 DEFB105AQ8NG35 78 aa8.26□□□□□ -1.09
XRCC1-208ENST00000598422 MUC2Q02817 5179 aa8.26□□□□□ -1.09
XRCC1-208ENST00000598422 TEX49A0A1B0GTD5 131 aa8.23□□□□□ -1.09
XRCC1-208ENST00000598422 A4D1N5 150 aa8.23□□□□□ -1.09
XRCC1-208ENST00000598422 Q1RN00 199 aa8.23□□□□□ -1.09
XRCC1-208ENST00000598422 KRTAP13-3Q3SY46 172 aa8.23□□□□□ -1.09
XRCC1-208ENST00000598422 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
XRCC1-208ENST00000598422 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
XRCC1-208ENST00000598422 SCGB1D1O95968 90 aa8.22□□□□□ -1.09
XRCC1-208ENST00000598422 SMIM11BQ8TCY0 68 aa8.22□□□□□ -1.09
XRCC1-208ENST00000598422 HRCT1Q6UXD1 115 aa8.21□□□□□ -1.1
XRCC1-208ENST00000598422 VAMP3Q15836 100 aa8.19□□□□□ -1.1
XRCC1-208ENST00000598422 PRO1933Q9H354 126 aa8.19□□□□□ -1.1
XRCC1-208ENST00000598422 IGLV5-48A0A075B6I7 105 aa8.17□□□□□ -1.1
XRCC1-208ENST00000598422 MUC17Q685J3 4493 aa8.16□□□□□ -1.1
XRCC1-208ENST00000598422 HIST1H4GQ99525 98 aa8.16□□□□□ -1.1
XRCC1-208ENST00000598422 H7C2G1 150 aa8.15□□□□□ -1.1
XRCC1-208ENST00000598422 CD164Q04900 197 aa8.15□□□□□ -1.1
XRCC1-208ENST00000598422 COX8AP10176 69 aa8.14□□□□□ -1.11
XRCC1-208ENST00000598422 LINC01547P58512 204 aaPredicted RBP8.14□□□□□ -1.11
XRCC1-208ENST00000598422 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
XRCC1-208ENST00000598422 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
XRCC1-208ENST00000598422 C12orf57Q99622 126 aa8.14□□□□□ -1.11
XRCC1-208ENST00000598422 F8WEM9 126 aa8.13□□□□□ -1.11
XRCC1-208ENST00000598422 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
XRCC1-208ENST00000598422 LINC00575Q6W349 94 aa8.12□□□□□ -1.11
XRCC1-208ENST00000598422 hADV29S1A0JD25 119 aa8.1□□□□□ -1.11
XRCC1-208ENST00000598422 DLEU1O43261 78 aa8.1□□□□□ -1.11
XRCC1-208ENST00000598422 PAM16Q9Y3D7 125 aa8.1□□□□□ -1.11
XRCC1-208ENST00000598422 Q6ZQY7 126 aa8.09□□□□□ -1.11
XRCC1-208ENST00000598422 SPATA45Q537H7 98 aa8.08□□□□□ -1.12
XRCC1-208ENST00000598422 BVES-AS1Q5T3Y7 98 aa8.08□□□□□ -1.12
XRCC1-208ENST00000598422 XP32Q5T750 250 aa8.08□□□□□ -1.12
XRCC1-208ENST00000598422 C14orf144Q96I85 54 aa8.08□□□□□ -1.12
XRCC1-208ENST00000598422 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
XRCC1-208ENST00000598422 A0A0G2JQZ4 141 aa8.07□□□□□ -1.12
XRCC1-208ENST00000598422 RAB37Q96AX2 223 aa8.07□□□□□ -1.12
XRCC1-208ENST00000598422 FAT4Q6V0I7 4981 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms