RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RETNLBQ9BQ08 111 aa9.88□□□□□ -0.83
PNKP-210ENST00000597965 SPANXB1Q9NS25 103 aaPredicted RBP9.88□□□□□ -0.83
PNKP-210ENST00000597965 IGLV7-46A0A075B6I9 117 aa9.87□□□□□ -0.83
PNKP-210ENST00000597965 A0A0J9YXY3 114 aa9.87□□□□□ -0.83
PNKP-210ENST00000597965 COX17Q14061 63 aa9.87□□□□□ -0.83
PNKP-210ENST00000597965 SFTA2Q6UW10 78 aa9.86□□□□□ -0.83
PNKP-210ENST00000597965 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
PNKP-210ENST00000597965 HIST1H4GQ99525 98 aa9.86□□□□□ -0.83
PNKP-210ENST00000597965 PFN2P35080 140 aa9.85□□□□□ -0.83
PNKP-210ENST00000597965 FXYD2P54710 66 aa9.85□□□□□ -0.83
PNKP-210ENST00000597965 SPAG11AQ6PDA7 123 aa9.85□□□□□ -0.83
PNKP-210ENST00000597965 TMEM126AQ9H061 195 aa9.85□□□□□ -0.83
PNKP-210ENST00000597965 A0A1B0GV90 55 aa9.84□□□□□ -0.83
PNKP-210ENST00000597965 PRLHP81277 87 aa9.84□□□□□ -0.83
PNKP-210ENST00000597965 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
PNKP-210ENST00000597965 LITAFQ99732 161 aa9.83□□□□□ -0.84
PNKP-210ENST00000597965 A6NDN8 102 aa9.82□□□□□ -0.84
PNKP-210ENST00000597965 TAX1BP3O14907 124 aa9.82□□□□□ -0.84
PNKP-210ENST00000597965 TIMM17BO60830 172 aa9.82□□□□□ -0.84
PNKP-210ENST00000597965 VPREB1P12018 145 aa9.82□□□□□ -0.84
PNKP-210ENST00000597965 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
PNKP-210ENST00000597965 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
PNKP-210ENST00000597965 TMEM238C9JI98 176 aa9.8□□□□□ -0.84
PNKP-210ENST00000597965 HERV-K104P63124 156 aa9.8□□□□□ -0.84
PNKP-210ENST00000597965 C4orf48Q5BLP8 95 aa9.8□□□□□ -0.84
PNKP-210ENST00000597965 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
PNKP-210ENST00000597965 PPDPFQ9H3Y8 114 aa9.8□□□□□ -0.84
PNKP-210ENST00000597965 FP248Q71RG6 208 aaPredicted RBP9.79□□□□□ -0.84
PNKP-210ENST00000597965 SPANXDQ9BXN6 97 aa9.79□□□□□ -0.84
PNKP-210ENST00000597965 SPANXCQ9NY87 97 aa9.79□□□□□ -0.84
PNKP-210ENST00000597965 ZNF706Q9Y5V0 76 aaPredicted RBP9.79□□□□□ -0.84
PNKP-210ENST00000597965 FAT4Q6V0I7 4981 aa9.78□□□□□ -0.84
PNKP-210ENST00000597965 A0A1B0GWB2 263 aa9.78□□□□□ -0.84
PNKP-210ENST00000597965 M0R378 163 aa9.78□□□□□ -0.84
PNKP-210ENST00000597965 SMIM13P0DJ93 91 aa9.78□□□□□ -0.84
PNKP-210ENST00000597965 Q6ZVH6 145 aa9.78□□□□□ -0.84
PNKP-210ENST00000597965 HIGD2AQ9BW72 106 aa9.78□□□□□ -0.84
PNKP-210ENST00000597965 MUSTN1Q8IVN3 82 aa9.77□□□□□ -0.85
PNKP-210ENST00000597965 NHP2Q9NX24 153 aaKnown RBP9.76□□□□□ -0.85
PNKP-210ENST00000597965 TMEM238LA0A1B0GVL6 79 aa9.75□□□□□ -0.85
PNKP-210ENST00000597965 A6NJY4 79 aa9.75□□□□□ -0.85
PNKP-210ENST00000597965 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
PNKP-210ENST00000597965 C9orf118A6NHY6 69 aa9.74□□□□□ -0.85
PNKP-210ENST00000597965 K7ERJ3 54 aa9.74□□□□□ -0.85
PNKP-210ENST00000597965 IFITM1P13164 125 aa9.74□□□□□ -0.85
PNKP-210ENST00000597965 C3orf22Q8N5N4 141 aa9.74□□□□□ -0.85
PNKP-210ENST00000597965 RAB37Q96AX2 223 aa9.73□□□□□ -0.85
PNKP-210ENST00000597965 KRTAP9-6A0A140TA67 174 aa9.72□□□□□ -0.85
PNKP-210ENST00000597965 A4D1N5 150 aa9.72□□□□□ -0.85
PNKP-210ENST00000597965 CFC1BP0CG36 223 aa9.72□□□□□ -0.85
PNKP-210ENST00000597965 CFC1P0CG37 223 aa9.72□□□□□ -0.85
PNKP-210ENST00000597965 MEIG1Q5JSS6 88 aa9.72□□□□□ -0.85
PNKP-210ENST00000597965 SPRR4Q96PI1 79 aa9.72□□□□□ -0.85
PNKP-210ENST00000597965 MUC17Q685J3 4493 aa9.72□□□□□ -0.85
PNKP-210ENST00000597965 LINC00158P58513 81 aa9.71□□□□□ -0.86
PNKP-210ENST00000597965 A0A0U1RRA0 63 aa9.7□□□□□ -0.86
PNKP-210ENST00000597965 EIF4EBP3O60516 100 aaPredicted RBP9.7□□□□□ -0.86
PNKP-210ENST00000597965 SPINK1P00995 79 aa9.7□□□□□ -0.86
PNKP-210ENST00000597965 DAND5Q8N907 189 aa9.7□□□□□ -0.86
PNKP-210ENST00000597965 LINC00308Q8TCZ7 52 aa9.7□□□□□ -0.86
PNKP-210ENST00000597965 SOSTDC1Q6X4U4 206 aa9.69□□□□□ -0.86
PNKP-210ENST00000597965 H3BUT2 72 aa9.68□□□□□ -0.86
PNKP-210ENST00000597965 PRYO14603 147 aa9.68□□□□□ -0.86
PNKP-210ENST00000597965 A0A0B4J2C4 111 aa9.67□□□□□ -0.86
PNKP-210ENST00000597965 NPC2P61916 151 aa9.67□□□□□ -0.86
PNKP-210ENST00000597965 Q8NDZ9 215 aa9.67□□□□□ -0.86
PNKP-210ENST00000597965 NAA38Q9BRA0 125 aaKnown RBP9.67□□□□□ -0.86
PNKP-210ENST00000597965 LINC01547P58512 204 aaPredicted RBP9.66□□□□□ -0.86
PNKP-210ENST00000597965 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
PNKP-210ENST00000597965 MIR7-3HGQ8N6C7 128 aa9.66□□□□□ -0.86
PNKP-210ENST00000597965 Q8NBF4 154 aa9.66□□□□□ -0.86
PNKP-210ENST00000597965 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
PNKP-210ENST00000597965 PRO1854Q9UHT4 67 aa9.66□□□□□ -0.86
PNKP-210ENST00000597965 A0A1W2PPM0 123 aa9.65□□□□□ -0.86
PNKP-210ENST00000597965 SEC61BP60468 96 aaKnown RBP9.65□□□□□ -0.86
PNKP-210ENST00000597965 VAMP3Q15836 100 aa9.65□□□□□ -0.86
PNKP-210ENST00000597965 KRTAP13-3Q3SY46 172 aa9.64□□□□□ -0.87
PNKP-210ENST00000597965 ETDCA0A1B0GVM5 59 aa9.63□□□□□ -0.87
PNKP-210ENST00000597965 KCNQ1DNQ9H478 68 aa9.63□□□□□ -0.87
PNKP-210ENST00000597965 SPRR1AP35321 89 aa9.62□□□□□ -0.87
PNKP-210ENST00000597965 RPS29P62273 56 aaKnown RBP9.62□□□□□ -0.87
PNKP-210ENST00000597965 LOC107984156A0A0G2JMH3 177 aa9.61□□□□□ -0.87
PNKP-210ENST00000597965 UBE2V1Q13404 147 aa9.61□□□□□ -0.87
PNKP-210ENST00000597965 ARL17AQ8IVW1 177 aa9.61□□□□□ -0.87
PNKP-210ENST00000597965 SMCR5Q8TEV8 140 aa9.61□□□□□ -0.87
PNKP-210ENST00000597965 FABP2P12104 132 aa9.6□□□□□ -0.87
PNKP-210ENST00000597965 LINC00483Q53H64 154 aa9.6□□□□□ -0.87
PNKP-210ENST00000597965 K7EP34 96 aa9.58□□□□□ -0.88
PNKP-210ENST00000597965 SSBP3-AS1Q7Z2R9 100 aa9.58□□□□□ -0.88
PNKP-210ENST00000597965 SPCS1Q9Y6A9 102 aa9.58□□□□□ -0.88
PNKP-210ENST00000597965 KRTAP4-16G5E9R7 235 aaPredicted RBP9.57□□□□□ -0.88
PNKP-210ENST00000597965 NCR3O14931 201 aa9.57□□□□□ -0.88
PNKP-210ENST00000597965 SLC25A20O43772 301 aa9.56□□□□□ -0.88
PNKP-210ENST00000597965 GAGE2AQ6NT46 116 aa9.56□□□□□ -0.88
PNKP-210ENST00000597965 GTF2H5Q6ZYL4 71 aa9.56□□□□□ -0.88
PNKP-210ENST00000597965 TRBV10-3A0A0K0K1G6 114 aa9.55□□□□□ -0.88
PNKP-210ENST00000597965 H7C2G1 150 aa9.55□□□□□ -0.88
PNKP-210ENST00000597965 MOBPQ13875 183 aa9.54□□□□□ -0.88
PNKP-210ENST00000597965 IGLV9-49A0A0B4J1Y8 123 aa9.53□□□□□ -0.88
PNKP-210ENST00000597965 TRAV13-2A0A0B4J235 113 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms