RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 MYMXA0A1B0GTQ4 84 aa5.31□□□□□ -1.56
TRIM28-210ENST00000597618 ZNF73O43830 326 aaPredicted RBP5.31□□□□□ -1.56
TRIM28-210ENST00000597618 LINC00614P0C842 121 aa5.31□□□□□ -1.56
TRIM28-210ENST00000597618 SPRR1BP22528 89 aa5.31□□□□□ -1.56
TRIM28-210ENST00000597618 S100PP25815 95 aa5.31□□□□□ -1.56
TRIM28-210ENST00000597618 PMCHL1Q16048 86 aa5.31□□□□□ -1.56
TRIM28-210ENST00000597618 LAMTOR3Q9UHA4 124 aa5.31□□□□□ -1.56
TRIM28-210ENST00000597618 Q5XG85 94 aa5.3□□□□□ -1.56
TRIM28-210ENST00000597618 URB1-AS1Q96HZ7 61 aa5.3□□□□□ -1.56
TRIM28-210ENST00000597618 MIEN1Q9BRT3 115 aa5.3□□□□□ -1.56
TRIM28-210ENST00000597618 TRAV12-1A0A0B4J245 112 aa5.29□□□□□ -1.56
TRIM28-210ENST00000597618 NDUFC2O95298 119 aa5.29□□□□□ -1.56
TRIM28-210ENST00000597618 HINT1P49773 126 aaPredicted RBP5.29□□□□□ -1.56
TRIM28-210ENST00000597618 C10orf91Q5T1B1 145 aa5.29□□□□□ -1.56
TRIM28-210ENST00000597618 C1orf195Q5TG92 126 aa5.29□□□□□ -1.56
TRIM28-210ENST00000597618 COMMD7Q86VX2 200 aa5.29□□□□□ -1.56
TRIM28-210ENST00000597618 KRTAP9-8Q9BYQ0 159 aa5.29□□□□□ -1.56
TRIM28-210ENST00000597618 H7C2G1 150 aa5.28□□□□□ -1.56
TRIM28-210ENST00000597618 C18orf32Q8TCD1 76 aa5.28□□□□□ -1.56
TRIM28-210ENST00000597618 PRO1933Q9H354 126 aa5.28□□□□□ -1.56
TRIM28-210ENST00000597618 CBY1Q9Y3M2 126 aa5.28□□□□□ -1.56
TRIM28-210ENST00000597618 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
TRIM28-210ENST00000597618 DHRS4-AS1Q9P1J3 65 aa5.27□□□□□ -1.57
TRIM28-210ENST00000597618 RHEBQ15382 184 aa5.25□□□□□ -1.57
TRIM28-210ENST00000597618 SMIM29Q86T20 159 aa5.25□□□□□ -1.57
TRIM28-210ENST00000597618 IFI27L1Q96BM0 104 aa5.25□□□□□ -1.57
TRIM28-210ENST00000597618 TSPEAR-AS2P59090 65 aa5.24□□□□□ -1.57
TRIM28-210ENST00000597618 Q1RN00 199 aa5.24□□□□□ -1.57
TRIM28-210ENST00000597618 RPS10P5Q9NQ39 176 aa5.24□□□□□ -1.57
TRIM28-210ENST00000597618 AKR1D1P51857 326 aa5.23□□□□□ -1.57
TRIM28-210ENST00000597618 ATP11AUNQ6ZP68 121 aa5.23□□□□□ -1.57
TRIM28-210ENST00000597618 LEPROTO15243 131 aa5.22□□□□□ -1.57
TRIM28-210ENST00000597618 NMUP48645 174 aa5.22□□□□□ -1.57
TRIM28-210ENST00000597618 TAL2Q16559 108 aa5.22□□□□□ -1.57
TRIM28-210ENST00000597618 TRAPPC1Q9Y5R8 145 aa5.22□□□□□ -1.57
TRIM28-210ENST00000597618 TEX49A0A1B0GTD5 131 aa5.21□□□□□ -1.58
TRIM28-210ENST00000597618 C20orf202A1L168 122 aa5.21□□□□□ -1.58
TRIM28-210ENST00000597618 J3QQQ9 107 aa5.2□□□□□ -1.58
TRIM28-210ENST00000597618 LCE2BO14633 110 aa5.2□□□□□ -1.58
TRIM28-210ENST00000597618 TCL1BO95988 128 aa5.2□□□□□ -1.58
TRIM28-210ENST00000597618 NPC2P61916 151 aa5.2□□□□□ -1.58
TRIM28-210ENST00000597618 SOSTDC1Q6X4U4 206 aa5.2□□□□□ -1.58
TRIM28-210ENST00000597618 DEFB105AQ8NG35 78 aa5.2□□□□□ -1.58
TRIM28-210ENST00000597618 MT2AP02795 61 aa5.19□□□□□ -1.58
TRIM28-210ENST00000597618 LGALS3P17931 250 aaKnown RBP5.19□□□□□ -1.58
TRIM28-210ENST00000597618 ELOF1P60002 83 aaKnown RBP5.19□□□□□ -1.58
TRIM28-210ENST00000597618 Q75L30 129 aa5.19□□□□□ -1.58
TRIM28-210ENST00000597618 OR13C6PQ8NH95 151 aa5.19□□□□□ -1.58
TRIM28-210ENST00000597618 CHCHD1Q96BP2 118 aaKnown RBP5.19□□□□□ -1.58
TRIM28-210ENST00000597618 EIF4EBP3O60516 100 aaPredicted RBP5.18□□□□□ -1.58
TRIM28-210ENST00000597618 SNAPINO95295 136 aa5.18□□□□□ -1.58
TRIM28-210ENST00000597618 APOC3P02656 99 aa5.18□□□□□ -1.58
TRIM28-210ENST00000597618 COX7BP24311 80 aa5.18□□□□□ -1.58
TRIM28-210ENST00000597618 PLNP26678 52 aa5.18□□□□□ -1.58
TRIM28-210ENST00000597618 HERVK_113P61574 105 aa5.18□□□□□ -1.58
TRIM28-210ENST00000597618 A0A0G2JQZ4 141 aa5.17□□□□□ -1.58
TRIM28-210ENST00000597618 H0Y8G0 127 aa5.17□□□□□ -1.58
TRIM28-210ENST00000597618 SVBPQ8N300 66 aa5.17□□□□□ -1.58
TRIM28-210ENST00000597618 LINC00846Q9NV44 126 aa5.17□□□□□ -1.58
TRIM28-210ENST00000597618 SPANXCQ9NY87 97 aa5.17□□□□□ -1.58
TRIM28-210ENST00000597618 NDUFA5Q16718 116 aa5.16□□□□□ -1.58
TRIM28-210ENST00000597618 ADAMTSL4-AS1Q5T5F5 129 aa5.16□□□□□ -1.58
TRIM28-210ENST00000597618 PCP2Q8IVA1 136 aa5.16□□□□□ -1.58
TRIM28-210ENST00000597618 YPEL4Q96NS1 127 aa5.16□□□□□ -1.58
TRIM28-210ENST00000597618 SPANXDQ9BXN6 97 aa5.16□□□□□ -1.58
TRIM28-210ENST00000597618 TRBV20-1A0A075B6N2 111 aa5.15□□□□□ -1.59
TRIM28-210ENST00000597618 A0A0J9YXY3 114 aa5.15□□□□□ -1.59
TRIM28-210ENST00000597618 MT1FP04733 61 aa5.15□□□□□ -1.59
TRIM28-210ENST00000597618 C6orf99Q4VX62 202 aa5.15□□□□□ -1.59
TRIM28-210ENST00000597618 OBSCN-AS1Q96MR7 158 aa5.15□□□□□ -1.59
TRIM28-210ENST00000597618 IGLV5-48A0A075B6I7 105 aa5.14□□□□□ -1.59
TRIM28-210ENST00000597618 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
TRIM28-210ENST00000597618 HSBP1O75506 76 aa5.13□□□□□ -1.59
TRIM28-210ENST00000597618 LINC00308Q8TCZ7 52 aa5.13□□□□□ -1.59
TRIM28-210ENST00000597618 TRBV7-6A0A0J9YX20 115 aa5.12□□□□□ -1.59
TRIM28-210ENST00000597618 DPM2O94777 84 aa5.12□□□□□ -1.59
TRIM28-210ENST00000597618 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
TRIM28-210ENST00000597618 A0A1B0GWB2 263 aa5.1□□□□□ -1.59
TRIM28-210ENST00000597618 LEPROTL1O95214 131 aa5.1□□□□□ -1.59
TRIM28-210ENST00000597618 IGKCP01834 107 aa5.1□□□□□ -1.59
TRIM28-210ENST00000597618 KRTAP19-6Q3LI70 58 aa5.1□□□□□ -1.59
TRIM28-210ENST00000597618 LINC00518Q8N0U6 118 aa5.1□□□□□ -1.59
TRIM28-210ENST00000597618 NEBP20929 6669 aa5.1□□□□□ -1.59
TRIM28-210ENST00000597618 F8WEM9 126 aa5.09□□□□□ -1.59
TRIM28-210ENST00000597618 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
TRIM28-210ENST00000597618 Q96NJ1 140 aa5.09□□□□□ -1.59
TRIM28-210ENST00000597618 LITAFQ99732 161 aa5.09□□□□□ -1.59
TRIM28-210ENST00000597618 E9PLD3 99 aa5.08□□□□□ -1.6
TRIM28-210ENST00000597618 TIMM17BO60830 172 aa5.08□□□□□ -1.6
TRIM28-210ENST00000597618 PMCHL2Q9BQD1 86 aa5.08□□□□□ -1.6
TRIM28-210ENST00000597618 TRBV7-7A0A0K0K1E9 115 aa5.07□□□□□ -1.6
TRIM28-210ENST00000597618 FAM236DA0A1B0GTK5 79 aa5.07□□□□□ -1.6
TRIM28-210ENST00000597618 TRGC2P03986 189 aa5.07□□□□□ -1.6
TRIM28-210ENST00000597618 FAM236CP0DP71 79 aa5.07□□□□□ -1.6
TRIM28-210ENST00000597618 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
TRIM28-210ENST00000597618 NHP2Q9NX24 153 aaKnown RBP5.07□□□□□ -1.6
TRIM28-210ENST00000597618 HSPB8Q9UJY1 196 aa5.07□□□□□ -1.6
TRIM28-210ENST00000597618 A4D1N5 150 aa5.06□□□□□ -1.6
TRIM28-210ENST00000597618 LINC00310P59036 64 aa5.06□□□□□ -1.6
TRIM28-210ENST00000597618 Q6JHZ5 121 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms