RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SMIM6P0DI80 62 aa12.38□□□□□ -0.43
PNKP-209ENST00000596726 S100A7L2Q5SY68 101 aa12.38□□□□□ -0.43
PNKP-209ENST00000596726 B5MCH6 92 aa12.37□□□□□ -0.43
PNKP-209ENST00000596726 SPRR4Q96PI1 79 aa12.37□□□□□ -0.43
PNKP-209ENST00000596726 SMCR5Q8TEV8 140 aa12.36□□□□□ -0.43
PNKP-209ENST00000596726 SPANXCQ9NY87 97 aa12.36□□□□□ -0.43
PNKP-209ENST00000596726 SPANXDQ9BXN6 97 aa12.34□□□□□ -0.43
PNKP-209ENST00000596726 TRAV23DV6A0A075B6W5 121 aa12.33□□□□□ -0.44
PNKP-209ENST00000596726 ZNF706Q9Y5V0 76 aaPredicted RBP12.33□□□□□ -0.44
PNKP-209ENST00000596726 SCGB1D4Q6XE38 83 aa12.32□□□□□ -0.44
PNKP-209ENST00000596726 PCP2Q8IVA1 136 aa12.32□□□□□ -0.44
PNKP-209ENST00000596726 LINC00518Q8N0U6 118 aa12.32□□□□□ -0.44
PNKP-209ENST00000596726 Q6ZRX8 168 aa12.31□□□□□ -0.44
PNKP-209ENST00000596726 Q9BRP9 147 aa12.3□□□□□ -0.44
PNKP-209ENST00000596726 C3orf22Q8N5N4 141 aa12.29□□□□□ -0.44
PNKP-209ENST00000596726 ZNF73O43830 326 aaPredicted RBP12.28□□□□□ -0.44
PNKP-209ENST00000596726 ERC2-IT1O76042 136 aa12.28□□□□□ -0.44
PNKP-209ENST00000596726 TSPAN13O95857 204 aa12.28□□□□□ -0.44
PNKP-209ENST00000596726 JOSD1Q15040 202 aaPredicted RBP12.28□□□□□ -0.44
PNKP-209ENST00000596726 PPDPFQ9H3Y8 114 aa12.28□□□□□ -0.44
PNKP-209ENST00000596726 CBY1Q9Y3M2 126 aa12.28□□□□□ -0.44
PNKP-209ENST00000596726 Q6ZVH6 145 aa12.27□□□□□ -0.45
PNKP-209ENST00000596726 C12orf57Q99622 126 aa12.27□□□□□ -0.45
PNKP-209ENST00000596726 IFITM1P13164 125 aa12.26□□□□□ -0.45
PNKP-209ENST00000596726 LINC00483Q53H64 154 aa12.26□□□□□ -0.45
PNKP-209ENST00000596726 LINC00304Q8N9R0 145 aa12.26□□□□□ -0.45
PNKP-209ENST00000596726 OR13C6PQ8NH95 151 aa12.26□□□□□ -0.45
PNKP-209ENST00000596726 LPAP08519 4548 aa12.25□□□□□ -0.45
PNKP-209ENST00000596726 COPS9Q8WXC6 57 aa12.24□□□□□ -0.45
PNKP-209ENST00000596726 PYY3Q5JQD4 70 aa12.23□□□□□ -0.45
PNKP-209ENST00000596726 HSBP1L1C9JCN9 74 aa12.22□□□□□ -0.45
PNKP-209ENST00000596726 CTAG1AP78358 180 aa12.22□□□□□ -0.45
PNKP-209ENST00000596726 MUSTN1Q8IVN3 82 aa12.22□□□□□ -0.45
PNKP-209ENST00000596726 HINT1P49773 126 aaPredicted RBP12.21□□□□□ -0.45
PNKP-209ENST00000596726 PRR4Q16378 134 aa12.21□□□□□ -0.45
PNKP-209ENST00000596726 GAGE2AQ6NT46 116 aa12.21□□□□□ -0.45
PNKP-209ENST00000596726 SCGB1D1O95968 90 aa12.19□□□□□ -0.46
PNKP-209ENST00000596726 SPAG11AQ6PDA7 123 aa12.16□□□□□ -0.46
PNKP-209ENST00000596726 C6orf99Q4VX62 202 aa12.15□□□□□ -0.46
PNKP-209ENST00000596726 ELOF1P60002 83 aaKnown RBP12.14□□□□□ -0.47
PNKP-209ENST00000596726 ST20-AS1Q8NBB2 130 aa12.13□□□□□ -0.47
PNKP-209ENST00000596726 Q8NBF4 154 aa12.13□□□□□ -0.47
PNKP-209ENST00000596726 DHRS4-AS1Q9P1J3 65 aa12.13□□□□□ -0.47
PNKP-209ENST00000596726 COX7BP24311 80 aa12.12□□□□□ -0.47
PNKP-209ENST00000596726 TRBV7-6A0A0J9YX20 115 aa12.11□□□□□ -0.47
PNKP-209ENST00000596726 A6NDN8 102 aa12.11□□□□□ -0.47
PNKP-209ENST00000596726 SSBP3-AS1Q7Z2R9 100 aa12.1□□□□□ -0.47
PNKP-209ENST00000596726 IGLV9-49A0A0B4J1Y8 123 aa12.09□□□□□ -0.47
PNKP-209ENST00000596726 TRAV13-2A0A0B4J235 113 aa12.09□□□□□ -0.47
PNKP-209ENST00000596726 MOBPQ13875 183 aa12.09□□□□□ -0.47
PNKP-209ENST00000596726 RETNLBQ9BQ08 111 aa12.09□□□□□ -0.47
PNKP-209ENST00000596726 COX8AP10176 69 aa12.08□□□□□ -0.48
PNKP-209ENST00000596726 SPRR1BP22528 89 aa12.08□□□□□ -0.48
PNKP-209ENST00000596726 C4orf48Q5BLP8 95 aa12.08□□□□□ -0.48
PNKP-209ENST00000596726 TSTD3H0UI37 97 aa12.07□□□□□ -0.48
PNKP-209ENST00000596726 VAMP8Q9BV40 100 aa12.07□□□□□ -0.48
PNKP-209ENST00000596726 A0A1B0GWB2 263 aa12.06□□□□□ -0.48
PNKP-209ENST00000596726 DLEU1O43261 78 aa12.05□□□□□ -0.48
PNKP-209ENST00000596726 RNF213Q63HN8 5207 aa12.04□□□□□ -0.48
PNKP-209ENST00000596726 A4D1N5 150 aa12.04□□□□□ -0.48
PNKP-209ENST00000596726 SPINK1P00995 79 aa12.04□□□□□ -0.48
PNKP-209ENST00000596726 SMIM11BQ8TCY0 68 aa12.04□□□□□ -0.48
PNKP-209ENST00000596726 C9orf153Q5TBE3 101 aa12□□□□□ -0.49
PNKP-209ENST00000596726 PAM16Q9Y3D7 125 aa12□□□□□ -0.49
PNKP-209ENST00000596726 RPS29P62273 56 aaKnown RBP11.99□□□□□ -0.49
PNKP-209ENST00000596726 SPATA45Q537H7 98 aa11.99□□□□□ -0.49
PNKP-209ENST00000596726 SLC25A34Q6PIV7 304 aa11.99□□□□□ -0.49
PNKP-209ENST00000596726 C14orf144Q96I85 54 aa11.99□□□□□ -0.49
PNKP-209ENST00000596726 HIST1H4GQ99525 98 aa11.99□□□□□ -0.49
PNKP-209ENST00000596726 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
PNKP-209ENST00000596726 TAL2Q16559 108 aa11.97□□□□□ -0.49
PNKP-209ENST00000596726 TEX49A0A1B0GTD5 131 aa11.96□□□□□ -0.49
PNKP-209ENST00000596726 LINC01547P58512 204 aaPredicted RBP11.96□□□□□ -0.49
PNKP-209ENST00000596726 TPRXLQ17RH7 258 aa11.96□□□□□ -0.49
PNKP-209ENST00000596726 HIGD1BQ9P298 99 aa11.96□□□□□ -0.49
PNKP-209ENST00000596726 LAMTOR3Q9UHA4 124 aa11.96□□□□□ -0.49
PNKP-209ENST00000596726 PCP4L1A6NKN8 68 aa11.95□□□□□ -0.5
PNKP-209ENST00000596726 FP248Q71RG6 208 aaPredicted RBP11.95□□□□□ -0.5
PNKP-209ENST00000596726 DEFB105AQ8NG35 78 aa11.95□□□□□ -0.5
PNKP-209ENST00000596726 IGLV5-48A0A075B6I7 105 aa11.94□□□□□ -0.5
PNKP-209ENST00000596726 Q8N377 158 aa11.93□□□□□ -0.5
PNKP-209ENST00000596726 NHP2Q9NX24 153 aaKnown RBP11.93□□□□□ -0.5
PNKP-209ENST00000596726 VAMP3Q15836 100 aa11.92□□□□□ -0.5
PNKP-209ENST00000596726 SMIM29Q86T20 159 aa11.92□□□□□ -0.5
PNKP-209ENST00000596726 C2orf91Q6ZV80 131 aa11.91□□□□□ -0.5
PNKP-209ENST00000596726 PRO1933Q9H354 126 aa11.91□□□□□ -0.5
PNKP-209ENST00000596726 UQCR10Q9UDW1 63 aa11.91□□□□□ -0.5
PNKP-209ENST00000596726 Q1RN00 199 aa11.9□□□□□ -0.5
PNKP-209ENST00000596726 LINC00575Q6W349 94 aa11.9□□□□□ -0.5
PNKP-209ENST00000596726 SLC25A20O43772 301 aa11.88□□□□□ -0.51
PNKP-209ENST00000596726 CFC1BP0CG36 223 aa11.87□□□□□ -0.51
PNKP-209ENST00000596726 CFC1P0CG37 223 aa11.87□□□□□ -0.51
PNKP-209ENST00000596726 CDIP1Q9H305 208 aa11.86□□□□□ -0.51
PNKP-209ENST00000596726 hADV29S1A0JD25 119 aa11.83□□□□□ -0.52
PNKP-209ENST00000596726 A0A0B4J2C4 111 aa11.82□□□□□ -0.52
PNKP-209ENST00000596726 CD164Q04900 197 aa11.82□□□□□ -0.52
PNKP-209ENST00000596726 KRTAP13-3Q3SY46 172 aa11.82□□□□□ -0.52
PNKP-209ENST00000596726 BVES-AS1Q5T3Y7 98 aa11.82□□□□□ -0.52
PNKP-209ENST00000596726 CEND1Q8N111 149 aa11.82□□□□□ -0.52
PNKP-209ENST00000596726 HRCT1Q6UXD1 115 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms