RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ANAPC11Q9NYG5 84 aa8.22□□□□□ -1.09
SHKBP1-207ENST00000595631 LINC00337Q8N6G1 96 aa8.21□□□□□ -1.1
SHKBP1-207ENST00000595631 VAMP8Q9BV40 100 aa8.21□□□□□ -1.1
SHKBP1-207ENST00000595631 A0A087X002 238 aa8.2□□□□□ -1.1
SHKBP1-207ENST00000595631 ETDCA0A1B0GVM5 59 aa8.2□□□□□ -1.1
SHKBP1-207ENST00000595631 TRAV23DV6A0A075B6W5 121 aa8.19□□□□□ -1.1
SHKBP1-207ENST00000595631 MUSTN1Q8IVN3 82 aa8.19□□□□□ -1.1
SHKBP1-207ENST00000595631 OR13C6PQ8NH95 151 aa8.19□□□□□ -1.1
SHKBP1-207ENST00000595631 B5MCH6 92 aa8.18□□□□□ -1.1
SHKBP1-207ENST00000595631 IFITM1P13164 125 aa8.17□□□□□ -1.1
SHKBP1-207ENST00000595631 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
SHKBP1-207ENST00000595631 PAM16Q9Y3D7 125 aa8.17□□□□□ -1.1
SHKBP1-207ENST00000595631 TSTD3H0UI37 97 aa8.16□□□□□ -1.1
SHKBP1-207ENST00000595631 COX8AP10176 69 aa8.16□□□□□ -1.1
SHKBP1-207ENST00000595631 SPATA45Q537H7 98 aa8.16□□□□□ -1.1
SHKBP1-207ENST00000595631 Q6ZVH6 145 aa8.16□□□□□ -1.1
SHKBP1-207ENST00000595631 ZNF73O43830 326 aaPredicted RBP8.15□□□□□ -1.1
SHKBP1-207ENST00000595631 C14orf144Q96I85 54 aa8.15□□□□□ -1.1
SHKBP1-207ENST00000595631 Q9BRP9 147 aa8.15□□□□□ -1.1
SHKBP1-207ENST00000595631 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
SHKBP1-207ENST00000595631 CRYGAP11844 174 aa8.14□□□□□ -1.11
SHKBP1-207ENST00000595631 RPL13AP40429 203 aaKnown RBP8.14□□□□□ -1.11
SHKBP1-207ENST00000595631 KRTAP13-2Q52LG2 175 aa8.14□□□□□ -1.11
SHKBP1-207ENST00000595631 Q6ZRX8 168 aa8.14□□□□□ -1.11
SHKBP1-207ENST00000595631 COPS9Q8WXC6 57 aa8.14□□□□□ -1.11
SHKBP1-207ENST00000595631 SPRR4Q96PI1 79 aa8.14□□□□□ -1.11
SHKBP1-207ENST00000595631 PPDPFQ9H3Y8 114 aa8.14□□□□□ -1.11
SHKBP1-207ENST00000595631 FAM229BQ4G0N7 80 aa8.12□□□□□ -1.11
SHKBP1-207ENST00000595631 A6NDN8 102 aa8.11□□□□□ -1.11
SHKBP1-207ENST00000595631 DLEU1O43261 78 aa8.11□□□□□ -1.11
SHKBP1-207ENST00000595631 TYMSOSQ8TAI1 123 aa8.11□□□□□ -1.11
SHKBP1-207ENST00000595631 A4D1N5 150 aa8.1□□□□□ -1.11
SHKBP1-207ENST00000595631 C6orf99Q4VX62 202 aa8.1□□□□□ -1.11
SHKBP1-207ENST00000595631 C3orf22Q8N5N4 141 aa8.1□□□□□ -1.11
SHKBP1-207ENST00000595631 UQCR10Q9UDW1 63 aa8.1□□□□□ -1.11
SHKBP1-207ENST00000595631 HIST1H4GQ99525 98 aa8.09□□□□□ -1.11
SHKBP1-207ENST00000595631 PRO1933Q9H354 126 aa8.09□□□□□ -1.11
SHKBP1-207ENST00000595631 CBY1Q9Y3M2 126 aa8.09□□□□□ -1.11
SHKBP1-207ENST00000595631 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.11
SHKBP1-207ENST00000595631 GAGE2AQ6NT46 116 aa8.08□□□□□ -1.12
SHKBP1-207ENST00000595631 C2orf91Q6ZV80 131 aa8.08□□□□□ -1.12
SHKBP1-207ENST00000595631 HINT1P49773 126 aaPredicted RBP8.07□□□□□ -1.12
SHKBP1-207ENST00000595631 SLC25A34Q6PIV7 304 aa8.07□□□□□ -1.12
SHKBP1-207ENST00000595631 ST20-AS1Q8NBB2 130 aa8.07□□□□□ -1.12
SHKBP1-207ENST00000595631 PCP4L1A6NKN8 68 aa8.06□□□□□ -1.12
SHKBP1-207ENST00000595631 COX7BP24311 80 aa8.06□□□□□ -1.12
SHKBP1-207ENST00000595631 ELOF1P60002 83 aaKnown RBP8.06□□□□□ -1.12
SHKBP1-207ENST00000595631 SMIM11BQ8TCY0 68 aa8.06□□□□□ -1.12
SHKBP1-207ENST00000595631 TRAV13-2A0A0B4J235 113 aa8.05□□□□□ -1.12
SHKBP1-207ENST00000595631 TSPAN13O95857 204 aa8.05□□□□□ -1.12
SHKBP1-207ENST00000595631 LINC00483Q53H64 154 aa8.05□□□□□ -1.12
SHKBP1-207ENST00000595631 HIGD1BQ9P298 99 aa8.05□□□□□ -1.12
SHKBP1-207ENST00000595631 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
SHKBP1-207ENST00000595631 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
SHKBP1-207ENST00000595631 A0A1B0GWB2 263 aa8.01□□□□□ -1.13
SHKBP1-207ENST00000595631 DHRS4-AS1Q9P1J3 65 aa8.01□□□□□ -1.13
SHKBP1-207ENST00000595631 IGLV9-49A0A0B4J1Y8 123 aa8□□□□□ -1.13
SHKBP1-207ENST00000595631 MOBPQ13875 183 aa7.99□□□□□ -1.13
SHKBP1-207ENST00000595631 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
SHKBP1-207ENST00000595631 CFC1BP0CG36 223 aa7.98□□□□□ -1.13
SHKBP1-207ENST00000595631 CFC1P0CG37 223 aa7.98□□□□□ -1.13
SHKBP1-207ENST00000595631 CEND1Q8N111 149 aa7.98□□□□□ -1.13
SHKBP1-207ENST00000595631 Q8NBF4 154 aa7.98□□□□□ -1.13
SHKBP1-207ENST00000595631 H7C2G1 150 aa7.97□□□□□ -1.13
SHKBP1-207ENST00000595631 TAL2Q16559 108 aa7.97□□□□□ -1.13
SHKBP1-207ENST00000595631 DEFB105AQ8NG35 78 aa7.97□□□□□ -1.13
SHKBP1-207ENST00000595631 FXYD2P54710 66 aa7.96□□□□□ -1.14
SHKBP1-207ENST00000595631 CTAG1AP78358 180 aa7.96□□□□□ -1.14
SHKBP1-207ENST00000595631 SPRR1BP22528 89 aa7.95□□□□□ -1.14
SHKBP1-207ENST00000595631 C9orf153Q5TBE3 101 aa7.95□□□□□ -1.14
SHKBP1-207ENST00000595631 RAB37Q96AX2 223 aa7.95□□□□□ -1.14
SHKBP1-207ENST00000595631 RETNLBQ9BQ08 111 aa7.95□□□□□ -1.14
SHKBP1-207ENST00000595631 A0A0B4J2C4 111 aa7.94□□□□□ -1.14
SHKBP1-207ENST00000595631 M0R143 59 aa7.94□□□□□ -1.14
SHKBP1-207ENST00000595631 LINC01547P58512 204 aaPredicted RBP7.93□□□□□ -1.14
SHKBP1-207ENST00000595631 HSD52Q0P140 79 aa7.93□□□□□ -1.14
SHKBP1-207ENST00000595631 VAMP3Q15836 100 aa7.93□□□□□ -1.14
SHKBP1-207ENST00000595631 PRR4Q16378 134 aa7.93□□□□□ -1.14
SHKBP1-207ENST00000595631 Q1RN00 199 aa7.92□□□□□ -1.14
SHKBP1-207ENST00000595631 LINC00575Q6W349 94 aa7.92□□□□□ -1.14
SHKBP1-207ENST00000595631 SSBP3-AS1Q7Z2R9 100 aa7.91□□□□□ -1.14
SHKBP1-207ENST00000595631 NHP2Q9NX24 153 aaKnown RBP7.91□□□□□ -1.14
SHKBP1-207ENST00000595631 IGLV5-48A0A075B6I7 105 aa7.9□□□□□ -1.14
SHKBP1-207ENST00000595631 TEX49A0A1B0GTD5 131 aa7.9□□□□□ -1.14
SHKBP1-207ENST00000595631 TMEM238LA0A1B0GVL6 79 aa7.9□□□□□ -1.14
SHKBP1-207ENST00000595631 A6NJY4 79 aa7.9□□□□□ -1.14
SHKBP1-207ENST00000595631 C4orf48Q5BLP8 95 aa7.9□□□□□ -1.14
SHKBP1-207ENST00000595631 SPAG11AQ6PDA7 123 aa7.9□□□□□ -1.14
SHKBP1-207ENST00000595631 SMIM29Q86T20 159 aa7.9□□□□□ -1.14
SHKBP1-207ENST00000595631 K7ERJ3 54 aa7.89□□□□□ -1.15
SHKBP1-207ENST00000595631 SLC25A20O43772 301 aa7.89□□□□□ -1.15
SHKBP1-207ENST00000595631 BVES-AS1Q5T3Y7 98 aa7.89□□□□□ -1.15
SHKBP1-207ENST00000595631 Q8N377 158 aa7.89□□□□□ -1.15
SHKBP1-207ENST00000595631 LAMTOR3Q9UHA4 124 aa7.89□□□□□ -1.15
SHKBP1-207ENST00000595631 PRO1854Q9UHT4 67 aa7.89□□□□□ -1.15
SHKBP1-207ENST00000595631 LPAP08519 4548 aa7.88□□□□□ -1.15
SHKBP1-207ENST00000595631 hADV29S1A0JD25 119 aa7.88□□□□□ -1.15
SHKBP1-207ENST00000595631 Q6ZQY7 126 aa7.88□□□□□ -1.15
SHKBP1-207ENST00000595631 SNHG12Q9BXW3 62 aa7.88□□□□□ -1.15
SHKBP1-207ENST00000595631 SPINK1P00995 79 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms