RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 C12orf57Q99622 126 aa6.44□□□□□ -1.38
SHKBP1-206ENST00000595523 B5MCH6 92 aa6.43□□□□□ -1.38
SHKBP1-206ENST00000595523 TYMSOSQ8TAI1 123 aa6.43□□□□□ -1.38
SHKBP1-206ENST00000595523 SPRR4Q96PI1 79 aa6.43□□□□□ -1.38
SHKBP1-206ENST00000595523 RNF213Q63HN8 5207 aa6.43□□□□□ -1.38
SHKBP1-206ENST00000595523 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
SHKBP1-206ENST00000595523 PCP2Q8IVA1 136 aa6.42□□□□□ -1.38
SHKBP1-206ENST00000595523 SPANXCQ9NY87 97 aa6.42□□□□□ -1.38
SHKBP1-206ENST00000595523 S100A7L2Q5SY68 101 aa6.41□□□□□ -1.38
SHKBP1-206ENST00000595523 C3orf22Q8N5N4 141 aa6.41□□□□□ -1.38
SHKBP1-206ENST00000595523 Q9BRP9 147 aa6.41□□□□□ -1.38
SHKBP1-206ENST00000595523 TRAV23DV6A0A075B6W5 121 aa6.4□□□□□ -1.38
SHKBP1-206ENST00000595523 ERC2-IT1O76042 136 aa6.4□□□□□ -1.38
SHKBP1-206ENST00000595523 S100A2P29034 98 aa6.4□□□□□ -1.38
SHKBP1-206ENST00000595523 AKR1D1P51857 326 aa6.4□□□□□ -1.38
SHKBP1-206ENST00000595523 Q6ZRX8 168 aa6.4□□□□□ -1.38
SHKBP1-206ENST00000595523 SPANXDQ9BXN6 97 aa6.4□□□□□ -1.38
SHKBP1-206ENST00000595523 TSPAN13O95857 204 aa6.39□□□□□ -1.39
SHKBP1-206ENST00000595523 SNRPEP62304 92 aaKnown RBP6.39□□□□□ -1.39
SHKBP1-206ENST00000595523 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
SHKBP1-206ENST00000595523 SCGB1D4Q6XE38 83 aa6.38□□□□□ -1.39
SHKBP1-206ENST00000595523 ZNF706Q9Y5V0 76 aaPredicted RBP6.38□□□□□ -1.39
SHKBP1-206ENST00000595523 LINC00483Q53H64 154 aa6.37□□□□□ -1.39
SHKBP1-206ENST00000595523 LINC00304Q8N9R0 145 aa6.37□□□□□ -1.39
SHKBP1-206ENST00000595523 PPDPFQ9H3Y8 114 aa6.37□□□□□ -1.39
SHKBP1-206ENST00000595523 GAGE2AQ6NT46 116 aa6.35□□□□□ -1.39
SHKBP1-206ENST00000595523 OR13C6PQ8NH95 151 aa6.35□□□□□ -1.39
SHKBP1-206ENST00000595523 IFITM1P13164 125 aa6.34□□□□□ -1.39
SHKBP1-206ENST00000595523 PRR4Q16378 134 aa6.34□□□□□ -1.39
SHKBP1-206ENST00000595523 Q6ZVH6 145 aa6.34□□□□□ -1.39
SHKBP1-206ENST00000595523 MUSTN1Q8IVN3 82 aa6.34□□□□□ -1.39
SHKBP1-206ENST00000595523 JOSD1Q15040 202 aaPredicted RBP6.33□□□□□ -1.4
SHKBP1-206ENST00000595523 PCP4L1A6NKN8 68 aa6.32□□□□□ -1.4
SHKBP1-206ENST00000595523 ST20-AS1Q8NBB2 130 aa6.32□□□□□ -1.4
SHKBP1-206ENST00000595523 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
SHKBP1-206ENST00000595523 CBY1Q9Y3M2 126 aa6.32□□□□□ -1.4
SHKBP1-206ENST00000595523 HSBP1L1C9JCN9 74 aa6.31□□□□□ -1.4
SHKBP1-206ENST00000595523 SCGB1D1O95968 90 aa6.31□□□□□ -1.4
SHKBP1-206ENST00000595523 ELOF1P60002 83 aaKnown RBP6.31□□□□□ -1.4
SHKBP1-206ENST00000595523 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
SHKBP1-206ENST00000595523 Q8NBF4 154 aa6.31□□□□□ -1.4
SHKBP1-206ENST00000595523 COPS9Q8WXC6 57 aa6.31□□□□□ -1.4
SHKBP1-206ENST00000595523 IGLV9-49A0A0B4J1Y8 123 aa6.29□□□□□ -1.4
SHKBP1-206ENST00000595523 COX7BP24311 80 aa6.29□□□□□ -1.4
SHKBP1-206ENST00000595523 HINT1P49773 126 aaPredicted RBP6.29□□□□□ -1.4
SHKBP1-206ENST00000595523 MOBPQ13875 183 aa6.29□□□□□ -1.4
SHKBP1-206ENST00000595523 A6NDN8 102 aa6.28□□□□□ -1.4
SHKBP1-206ENST00000595523 SPAG11AQ6PDA7 123 aa6.28□□□□□ -1.4
SHKBP1-206ENST00000595523 DHRS4-AS1Q9P1J3 65 aa6.28□□□□□ -1.4
SHKBP1-206ENST00000595523 TRBV7-6A0A0J9YX20 115 aa6.27□□□□□ -1.41
SHKBP1-206ENST00000595523 TSTD3H0UI37 97 aa6.27□□□□□ -1.41
SHKBP1-206ENST00000595523 COX8AP10176 69 aa6.27□□□□□ -1.41
SHKBP1-206ENST00000595523 SPRR1BP22528 89 aa6.27□□□□□ -1.41
SHKBP1-206ENST00000595523 A4D1N5 150 aa6.26□□□□□ -1.41
SHKBP1-206ENST00000595523 PYY3Q5JQD4 70 aa6.26□□□□□ -1.41
SHKBP1-206ENST00000595523 SMIM11BQ8TCY0 68 aa6.26□□□□□ -1.41
SHKBP1-206ENST00000595523 MUC2Q02817 5179 aa6.25□□□□□ -1.41
SHKBP1-206ENST00000595523 TRAV13-2A0A0B4J235 113 aa6.25□□□□□ -1.41
SHKBP1-206ENST00000595523 SSBP3-AS1Q7Z2R9 100 aa6.25□□□□□ -1.41
SHKBP1-206ENST00000595523 A0A1B0GWB2 263 aa6.24□□□□□ -1.41
SHKBP1-206ENST00000595523 DLEU1O43261 78 aa6.24□□□□□ -1.41
SHKBP1-206ENST00000595523 SPINK1P00995 79 aa6.24□□□□□ -1.41
SHKBP1-206ENST00000595523 C4orf48Q5BLP8 95 aa6.24□□□□□ -1.41
SHKBP1-206ENST00000595523 LINC01547P58512 204 aaPredicted RBP6.23□□□□□ -1.41
SHKBP1-206ENST00000595523 SPATA45Q537H7 98 aa6.23□□□□□ -1.41
SHKBP1-206ENST00000595523 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
SHKBP1-206ENST00000595523 C14orf144Q96I85 54 aa6.23□□□□□ -1.41
SHKBP1-206ENST00000595523 PAM16Q9Y3D7 125 aa6.23□□□□□ -1.41
SHKBP1-206ENST00000595523 IGLV7-46A0A075B6I9 117 aa6.22□□□□□ -1.41
SHKBP1-206ENST00000595523 IGLV5-48A0A075B6I7 105 aa6.21□□□□□ -1.42
SHKBP1-206ENST00000595523 RPS29P62273 56 aaKnown RBP6.21□□□□□ -1.42
SHKBP1-206ENST00000595523 TPRXLQ17RH7 258 aa6.21□□□□□ -1.42
SHKBP1-206ENST00000595523 C2orf91Q6ZV80 131 aa6.21□□□□□ -1.42
SHKBP1-206ENST00000595523 SMIM29Q86T20 159 aa6.21□□□□□ -1.42
SHKBP1-206ENST00000595523 Q8N377 158 aa6.21□□□□□ -1.42
SHKBP1-206ENST00000595523 HIST1H4GQ99525 98 aa6.21□□□□□ -1.42
SHKBP1-206ENST00000595523 VAMP8Q9BV40 100 aa6.21□□□□□ -1.42
SHKBP1-206ENST00000595523 Q1RN00 199 aa6.2□□□□□ -1.42
SHKBP1-206ENST00000595523 DEFB105AQ8NG35 78 aa6.2□□□□□ -1.42
SHKBP1-206ENST00000595523 MUC17Q685J3 4493 aa6.2□□□□□ -1.42
SHKBP1-206ENST00000595523 TEX49A0A1B0GTD5 131 aa6.19□□□□□ -1.42
SHKBP1-206ENST00000595523 TAL2Q16559 108 aa6.19□□□□□ -1.42
SHKBP1-206ENST00000595523 SLC25A34Q6PIV7 304 aa6.19□□□□□ -1.42
SHKBP1-206ENST00000595523 FP248Q71RG6 208 aaPredicted RBP6.19□□□□□ -1.42
SHKBP1-206ENST00000595523 HIGD1BQ9P298 99 aa6.19□□□□□ -1.42
SHKBP1-206ENST00000595523 LAMTOR3Q9UHA4 124 aa6.18□□□□□ -1.42
SHKBP1-206ENST00000595523 LINC00575Q6W349 94 aa6.17□□□□□ -1.42
SHKBP1-206ENST00000595523 CFC1BP0CG36 223 aa6.16□□□□□ -1.42
SHKBP1-206ENST00000595523 CFC1P0CG37 223 aa6.16□□□□□ -1.42
SHKBP1-206ENST00000595523 KRTAP13-3Q3SY46 172 aa6.16□□□□□ -1.42
SHKBP1-206ENST00000595523 NHP2Q9NX24 153 aaKnown RBP6.16□□□□□ -1.42
SHKBP1-206ENST00000595523 SLC25A20O43772 301 aa6.15□□□□□ -1.42
SHKBP1-206ENST00000595523 HRCT1Q6UXD1 115 aa6.15□□□□□ -1.42
SHKBP1-206ENST00000595523 CDIP1Q9H305 208 aa6.15□□□□□ -1.42
SHKBP1-206ENST00000595523 A0A0G2JQZ4 141 aa6.14□□□□□ -1.43
SHKBP1-206ENST00000595523 VAMP3Q15836 100 aa6.14□□□□□ -1.43
SHKBP1-206ENST00000595523 A0A0B4J2C4 111 aa6.13□□□□□ -1.43
SHKBP1-206ENST00000595523 hADV29S1A0JD25 119 aa6.13□□□□□ -1.43
SHKBP1-206ENST00000595523 H7C2G1 150 aa6.13□□□□□ -1.43
SHKBP1-206ENST00000595523 Q6ZQY7 126 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms