RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 SMIM1B2RUZ4 78 aa10.78□□□□□ -0.68
PDE4C-208ENST00000595343 SPINK8P0C7L1 97 aa10.78□□□□□ -0.68
PDE4C-208ENST00000595343 IGLV7-46A0A075B6I9 117 aa10.77□□□□□ -0.69
PDE4C-208ENST00000595343 TMEM238C9JI98 176 aa10.77□□□□□ -0.69
PDE4C-208ENST00000595343 COX7B2Q8TF08 81 aa10.77□□□□□ -0.69
PDE4C-208ENST00000595343 TMEM238LA0A1B0GVL6 79 aa10.76□□□□□ -0.69
PDE4C-208ENST00000595343 A6NJY4 79 aa10.76□□□□□ -0.69
PDE4C-208ENST00000595343 TIMM17BO60830 172 aa10.76□□□□□ -0.69
PDE4C-208ENST00000595343 Q6ZVH6 145 aa10.76□□□□□ -0.69
PDE4C-208ENST00000595343 NKAPP1Q8N9T2 125 aa10.76□□□□□ -0.69
PDE4C-208ENST00000595343 NDUFA12Q9UI09 145 aa10.76□□□□□ -0.69
PDE4C-208ENST00000595343 FXYD2P54710 66 aa10.75□□□□□ -0.69
PDE4C-208ENST00000595343 A0A0J9YXY3 114 aa10.74□□□□□ -0.69
PDE4C-208ENST00000595343 TAX1BP3O14907 124 aa10.74□□□□□ -0.69
PDE4C-208ENST00000595343 SFTA2Q6UW10 78 aa10.74□□□□□ -0.69
PDE4C-208ENST00000595343 IGKV2-28A0A075B6P5 120 aa10.73□□□□□ -0.69
PDE4C-208ENST00000595343 A0A1B0GWB2 263 aa10.73□□□□□ -0.69
PDE4C-208ENST00000595343 IGKV2D-28P01615 120 aa10.73□□□□□ -0.69
PDE4C-208ENST00000595343 SMIM13P0DJ93 91 aa10.73□□□□□ -0.69
PDE4C-208ENST00000595343 HERV-K104P63124 156 aa10.73□□□□□ -0.69
PDE4C-208ENST00000595343 SPANXDQ9BXN6 97 aa10.72□□□□□ -0.69
PDE4C-208ENST00000595343 SPANXCQ9NY87 97 aa10.72□□□□□ -0.69
PDE4C-208ENST00000595343 PRLHP81277 87 aa10.71□□□□□ -0.69
PDE4C-208ENST00000595343 PPDPFQ9H3Y8 114 aa10.7□□□□□ -0.7
PDE4C-208ENST00000595343 C9orf118A6NHY6 69 aa10.69□□□□□ -0.7
PDE4C-208ENST00000595343 ZNF625Q96I27 306 aaPredicted RBP10.69□□□□□ -0.7
PDE4C-208ENST00000595343 LITAFQ99732 161 aa10.69□□□□□ -0.7
PDE4C-208ENST00000595343 IFITM1P13164 125 aa10.68□□□□□ -0.7
PDE4C-208ENST00000595343 RPL24P83731 157 aaKnown RBP10.68□□□□□ -0.7
PDE4C-208ENST00000595343 FAM19A1Q7Z5A9 133 aa10.68□□□□□ -0.7
PDE4C-208ENST00000595343 NHP2Q9NX24 153 aaKnown RBP10.68□□□□□ -0.7
PDE4C-208ENST00000595343 COPS9Q8WXC6 57 aa10.67□□□□□ -0.7
PDE4C-208ENST00000595343 TMEM126AQ9H061 195 aa10.67□□□□□ -0.7
PDE4C-208ENST00000595343 C3orf22Q8N5N4 141 aa10.66□□□□□ -0.7
PDE4C-208ENST00000595343 VPREB1P12018 145 aa10.64□□□□□ -0.71
PDE4C-208ENST00000595343 PFN2P35080 140 aa10.64□□□□□ -0.71
PDE4C-208ENST00000595343 M0R378 163 aa10.63□□□□□ -0.71
PDE4C-208ENST00000595343 A0A0B4J2C4 111 aa10.62□□□□□ -0.71
PDE4C-208ENST00000595343 MUSTN1Q8IVN3 82 aa10.62□□□□□ -0.71
PDE4C-208ENST00000595343 SND1-IT1Q9HBX3 110 aa10.62□□□□□ -0.71
PDE4C-208ENST00000595343 SPAG11AQ6PDA7 123 aa10.61□□□□□ -0.71
PDE4C-208ENST00000595343 A4D1N5 150 aa10.6□□□□□ -0.71
PDE4C-208ENST00000595343 VAMP3Q15836 100 aa10.6□□□□□ -0.71
PDE4C-208ENST00000595343 MEIG1Q5JSS6 88 aa10.6□□□□□ -0.71
PDE4C-208ENST00000595343 ADAMTSL4-AS1Q5T5F5 129 aa10.6□□□□□ -0.71
PDE4C-208ENST00000595343 RAB37Q96AX2 223 aa10.6□□□□□ -0.71
PDE4C-208ENST00000595343 A0A1W2PPM0 123 aa10.59□□□□□ -0.71
PDE4C-208ENST00000595343 H3BUT2 72 aa10.59□□□□□ -0.71
PDE4C-208ENST00000595343 K7ERJ3 54 aa10.59□□□□□ -0.71
PDE4C-208ENST00000595343 UBE2V1Q13404 147 aa10.59□□□□□ -0.71
PDE4C-208ENST00000595343 FP248Q71RG6 208 aaPredicted RBP10.59□□□□□ -0.71
PDE4C-208ENST00000595343 CFC1BP0CG36 223 aa10.58□□□□□ -0.72
PDE4C-208ENST00000595343 CFC1P0CG37 223 aa10.58□□□□□ -0.72
PDE4C-208ENST00000595343 FABP2P12104 132 aa10.58□□□□□ -0.72
PDE4C-208ENST00000595343 Q8NDZ9 215 aa10.58□□□□□ -0.72
PDE4C-208ENST00000595343 HIGD2AQ9BW72 106 aa10.58□□□□□ -0.72
PDE4C-208ENST00000595343 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
PDE4C-208ENST00000595343 ERG28Q9UKR5 140 aa10.58□□□□□ -0.72
PDE4C-208ENST00000595343 GTF2H5Q6ZYL4 71 aa10.57□□□□□ -0.72
PDE4C-208ENST00000595343 LINC00337Q8N6G1 96 aa10.57□□□□□ -0.72
PDE4C-208ENST00000595343 KRTAP13-3Q3SY46 172 aa10.56□□□□□ -0.72
PDE4C-208ENST00000595343 LYRM7Q5U5X0 104 aa10.56□□□□□ -0.72
PDE4C-208ENST00000595343 LINC00308Q8TCZ7 52 aa10.56□□□□□ -0.72
PDE4C-208ENST00000595343 SPRR4Q96PI1 79 aa10.56□□□□□ -0.72
PDE4C-208ENST00000595343 COX17Q14061 63 aa10.55□□□□□ -0.72
PDE4C-208ENST00000595343 ASB16-AS1Q495Z4 193 aa10.55□□□□□ -0.72
PDE4C-208ENST00000595343 K7EP34 96 aa10.54□□□□□ -0.72
PDE4C-208ENST00000595343 C4orf48Q5BLP8 95 aa10.54□□□□□ -0.72
PDE4C-208ENST00000595343 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
PDE4C-208ENST00000595343 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
PDE4C-208ENST00000595343 DAND5Q8N907 189 aa10.51□□□□□ -0.73
PDE4C-208ENST00000595343 Q8NBF4 154 aa10.51□□□□□ -0.73
PDE4C-208ENST00000595343 KRTAP4-1Q9BYQ7 146 aa10.51□□□□□ -0.73
PDE4C-208ENST00000595343 SPCS1Q9Y6A9 102 aa10.51□□□□□ -0.73
PDE4C-208ENST00000595343 LOC107984156A0A0G2JMH3 177 aa10.5□□□□□ -0.73
PDE4C-208ENST00000595343 ARL17AQ8IVW1 177 aa10.5□□□□□ -0.73
PDE4C-208ENST00000595343 MIR7-3HGQ8N6C7 128 aa10.5□□□□□ -0.73
PDE4C-208ENST00000595343 ZNF706Q9Y5V0 76 aaPredicted RBP10.5□□□□□ -0.73
PDE4C-208ENST00000595343 EIF4EBP3O60516 100 aaPredicted RBP10.49□□□□□ -0.73
PDE4C-208ENST00000595343 LINC00158P58513 81 aa10.49□□□□□ -0.73
PDE4C-208ENST00000595343 SOSTDC1Q6X4U4 206 aa10.49□□□□□ -0.73
PDE4C-208ENST00000595343 NAA38Q9BRA0 125 aaKnown RBP10.49□□□□□ -0.73
PDE4C-208ENST00000595343 TRBV20-1A0A075B6N2 111 aa10.46□□□□□ -0.73
PDE4C-208ENST00000595343 A0A0U1RRA0 63 aa10.46□□□□□ -0.73
PDE4C-208ENST00000595343 SEC61BP60468 96 aaKnown RBP10.46□□□□□ -0.73
PDE4C-208ENST00000595343 NPC2P61916 151 aa10.46□□□□□ -0.73
PDE4C-208ENST00000595343 SPINK1P00995 79 aa10.45□□□□□ -0.74
PDE4C-208ENST00000595343 TRAV13-2A0A0B4J235 113 aa10.44□□□□□ -0.74
PDE4C-208ENST00000595343 PRYO14603 147 aa10.42□□□□□ -0.74
PDE4C-208ENST00000595343 NDUFC2O95298 119 aa10.42□□□□□ -0.74
PDE4C-208ENST00000595343 Q1RN00 199 aa10.42□□□□□ -0.74
PDE4C-208ENST00000595343 SMCR5Q8TEV8 140 aa10.42□□□□□ -0.74
PDE4C-208ENST00000595343 COX6CP09669 75 aa10.41□□□□□ -0.74
PDE4C-208ENST00000595343 SPRR1AP35321 89 aa10.41□□□□□ -0.74
PDE4C-208ENST00000595343 PSMB2P49721 201 aa10.41□□□□□ -0.74
PDE4C-208ENST00000595343 CRCT1Q9UGL9 99 aa10.41□□□□□ -0.74
PDE4C-208ENST00000595343 FSIP2Q5CZC0 6907 aa10.41□□□□□ -0.74
PDE4C-208ENST00000595343 KCNQ1DNQ9H478 68 aa10.4□□□□□ -0.74
PDE4C-208ENST00000595343 LINC00483Q53H64 154 aa10.39□□□□□ -0.75
PDE4C-208ENST00000595343 F8W1H4 67 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms