RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 IGLV5-37A0A075B6J1 123 aa8.65□□□□□ -1.02
VRK3-209ENST00000594948 Q8N377 158 aa8.65□□□□□ -1.02
VRK3-209ENST00000594948 C7orf33Q8WU49 177 aa8.65□□□□□ -1.02
VRK3-209ENST00000594948 OCR1Q9BZK8 76 aa8.65□□□□□ -1.02
VRK3-209ENST00000594948 TENM4Q6N022 2769 aa8.64□□□□□ -1.03
VRK3-209ENST00000594948 INAFM1C9JVW0 142 aa8.64□□□□□ -1.03
VRK3-209ENST00000594948 PRYO14603 147 aa8.64□□□□□ -1.03
VRK3-209ENST00000594948 Q6ZTC4 211 aa8.64□□□□□ -1.03
VRK3-209ENST00000594948 IGKV2D-24A0A075B6R9 120 aa8.63□□□□□ -1.03
VRK3-209ENST00000594948 A0A0U1RQV1 116 aa8.63□□□□□ -1.03
VRK3-209ENST00000594948 SPRR1AP35321 89 aa8.61□□□□□ -1.03
VRK3-209ENST00000594948 FUSP35637 526 aaKnown RBP eCLIP8.61□□□□□ -1.03
VRK3-209ENST00000594948 SERTAD4-AS1Q5TG53 156 aa8.61□□□□□ -1.03
VRK3-209ENST00000594948 Q6ZRX8 168 aa8.61□□□□□ -1.03
VRK3-209ENST00000594948 KRTAP4-16G5E9R7 235 aaPredicted RBP8.61□□□□□ -1.03
VRK3-209ENST00000594948 TNP2Q05952 138 aa8.61□□□□□ -1.03
VRK3-209ENST00000594948 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
VRK3-209ENST00000594948 Q8N9L7 120 aa8.59□□□□□ -1.03
VRK3-209ENST00000594948 MRAPQ8TCY5 172 aa8.59□□□□□ -1.03
VRK3-209ENST00000594948 RETNQ9HD89 108 aa8.59□□□□□ -1.03
VRK3-209ENST00000594948 HELZ2Q9BYK8 2649 aaKnown RBP8.59□□□□□ -1.03
VRK3-209ENST00000594948 VWFP04275 2813 aa8.59□□□□□ -1.03
VRK3-209ENST00000594948 ITPR2Q14571 2701 aa8.59□□□□□ -1.03
VRK3-209ENST00000594948 C3orf84H3BNL1 204 aa8.59□□□□□ -1.03
VRK3-209ENST00000594948 FP248Q71RG6 208 aaPredicted RBP8.59□□□□□ -1.03
VRK3-209ENST00000594948 IGLV1-50A0A075B6I6 118 aa8.58□□□□□ -1.04
VRK3-209ENST00000594948 Q8NBF4 154 aa8.57□□□□□ -1.04
VRK3-209ENST00000594948 DEFB105AQ8NG35 78 aa8.57□□□□□ -1.04
VRK3-209ENST00000594948 SPRR4Q96PI1 79 aa8.57□□□□□ -1.04
VRK3-209ENST00000594948 NOTCH2Q04721 2471 aa8.57□□□□□ -1.04
VRK3-209ENST00000594948 DEFB131BA0A096LNP1 70 aa8.57□□□□□ -1.04
VRK3-209ENST00000594948 LCE6AA0A183 80 aa8.57□□□□□ -1.04
VRK3-209ENST00000594948 A0A1W2PNM2 257 aa8.57□□□□□ -1.04
VRK3-209ENST00000594948 ETDCA0A1B0GVM5 59 aa8.56□□□□□ -1.04
VRK3-209ENST00000594948 Q9BRP9 147 aa8.56□□□□□ -1.04
VRK3-209ENST00000594948 UNC79Q9P2D8 2635 aa8.55□□□□□ -1.04
VRK3-209ENST00000594948 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
VRK3-209ENST00000594948 HIVEP1P15822 2718 aa8.55□□□□□ -1.04
VRK3-209ENST00000594948 KRTAP10-11P60412 298 aa8.54□□□□□ -1.04
VRK3-209ENST00000594948 C11orf45Q8TAV5 145 aa8.53□□□□□ -1.04
VRK3-209ENST00000594948 PRO0628Q9UI54 55 aa8.53□□□□□ -1.04
VRK3-209ENST00000594948 SMIM29Q86T20 159 aa8.51□□□□□ -1.05
VRK3-209ENST00000594948 RPL37AP8A6NKH3 93 aa8.5□□□□□ -1.05
VRK3-209ENST00000594948 OXLD1Q5BKU9 147 aa8.5□□□□□ -1.05
VRK3-209ENST00000594948 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
VRK3-209ENST00000594948 FASNP49327 2511 aaKnown RBP8.5□□□□□ -1.05
VRK3-209ENST00000594948 LINC00336Q6ZUF6 198 aa8.5□□□□□ -1.05
VRK3-209ENST00000594948 MRPL55Q7Z7F7 128 aaKnown RBP8.5□□□□□ -1.05
VRK3-209ENST00000594948 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
VRK3-209ENST00000594948 NSD1Q96L73 2696 aaPredicted RBP8.48□□□□□ -1.05
VRK3-209ENST00000594948 FAM168BA1KXE4 195 aa8.48□□□□□ -1.05
VRK3-209ENST00000594948 DSCR10P59022 87 aa8.48□□□□□ -1.05
VRK3-209ENST00000594948 ST20-AS1Q8NBB2 130 aa8.48□□□□□ -1.05
VRK3-209ENST00000594948 LINC00474Q9P2X8 69 aa8.48□□□□□ -1.05
VRK3-209ENST00000594948 TENM1Q9UKZ4 2725 aa8.48□□□□□ -1.05
VRK3-209ENST00000594948 TEP1Q99973 2627 aaKnown RBP8.47□□□□□ -1.05
VRK3-209ENST00000594948 ZCCHC13Q8WW36 166 aaKnown RBP8.47□□□□□ -1.05
VRK3-209ENST00000594948 FAM30AQ9NZY2 134 aa8.47□□□□□ -1.05
VRK3-209ENST00000594948 UBE2BP63146 152 aa8.45□□□□□ -1.06
VRK3-209ENST00000594948 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
VRK3-209ENST00000594948 REG3GQ6UW15 175 aa8.45□□□□□ -1.06
VRK3-209ENST00000594948 IGLV8-61A0A075B6I0 122 aa8.43□□□□□ -1.06
VRK3-209ENST00000594948 FAM229BQ4G0N7 80 aa8.43□□□□□ -1.06
VRK3-209ENST00000594948 K7EQZ3 153 aa8.43□□□□□ -1.06
VRK3-209ENST00000594948 CASC10Q5T4H9 136 aa8.43□□□□□ -1.06
VRK3-209ENST00000594948 LINC00476Q8WZB0 136 aa8.43□□□□□ -1.06
VRK3-209ENST00000594948 HCG22E2RYF7 251 aa8.42□□□□□ -1.06
VRK3-209ENST00000594948 hDV103S1A0JD37 113 aa8.41□□□□□ -1.06
VRK3-209ENST00000594948 ATRQ13535 2644 aa8.41□□□□□ -1.06
VRK3-209ENST00000594948 HECTD1Q9ULT8 2610 aa8.4□□□□□ -1.07
VRK3-209ENST00000594948 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
VRK3-209ENST00000594948 PSCAO43653 123 aa8.38□□□□□ -1.07
VRK3-209ENST00000594948 IGFL1Q6UW32 110 aa8.38□□□□□ -1.07
VRK3-209ENST00000594948 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.38□□□□□ -1.07
VRK3-209ENST00000594948 NDUFB1O75438 58 aa8.37□□□□□ -1.07
VRK3-209ENST00000594948 OTOGQ6ZRI0 2925 aa8.36□□□□□ -1.07
VRK3-209ENST00000594948 MPLKIPQ8TAP9 179 aa8.36□□□□□ -1.07
VRK3-209ENST00000594948 C16orf90A8MZG2 172 aa8.35□□□□□ -1.07
VRK3-209ENST00000594948 CNBPP62633 177 aaKnown RBP8.34□□□□□ -1.07
VRK3-209ENST00000594948 Q1T7F1 81 aa8.34□□□□□ -1.07
VRK3-209ENST00000594948 DNAH1Q9P2D7 4330 aa8.34□□□□□ -1.07
VRK3-209ENST00000594948 C1orf64Q8NEQ6 169 aa8.33□□□□□ -1.08
VRK3-209ENST00000594948 TRRAPQ9Y4A5 3859 aa8.33□□□□□ -1.08
VRK3-209ENST00000594948 SPRR1BP22528 89 aa8.33□□□□□ -1.08
VRK3-209ENST00000594948 TENM3Q9P273 2699 aa8.32□□□□□ -1.08
VRK3-209ENST00000594948 H0Y9J4 135 aa8.32□□□□□ -1.08
VRK3-209ENST00000594948 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
VRK3-209ENST00000594948 PKD1L1Q8TDX9 2849 aa8.32□□□□□ -1.08
VRK3-209ENST00000594948 A0A096LNI7 61 aa8.31□□□□□ -1.08
VRK3-209ENST00000594948 H3BPC8 53 aa8.31□□□□□ -1.08
VRK3-209ENST00000594948 KRTAP29-1A8MX34 341 aaPredicted RBP8.31□□□□□ -1.08
VRK3-209ENST00000594948 MP68P56378 58 aa8.31□□□□□ -1.08
VRK3-209ENST00000594948 KRTAP24-1Q3LI83 254 aa8.31□□□□□ -1.08
VRK3-209ENST00000594948 DNAH3Q8TD57 4116 aa8.31□□□□□ -1.08
VRK3-209ENST00000594948 A0A087WSZ3 146 aa8.3□□□□□ -1.08
VRK3-209ENST00000594948 A0A1W2PNN7 141 aa8.29□□□□□ -1.08
VRK3-209ENST00000594948 UBE2AP49459 152 aa8.29□□□□□ -1.08
VRK3-209ENST00000594948 PRLHP81277 87 aa8.29□□□□□ -1.08
VRK3-209ENST00000594948 TRAV22A0A0B4J277 110 aa8.28□□□□□ -1.08
VRK3-209ENST00000594948 WFDC13Q8IUB5 93 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms