RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 C5orf52A6NGY3 159 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 K7EN84 100 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 PFDN1O60925 122 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 MPC2O95563 127 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 NPYP01303 97 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 GNG4P50150 75 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 S100A12P80511 92 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 PMVKQ15126 192 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 RPL7L1Q6DKI1 246 aaKnown RBP1.11□□□□□ -2.23
VRK3-204ENST00000593912 MT1MQ8N339 61 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 C20orf78Q9BR46 151 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 TRBV24-1A0A075B6N3 115 aa1.1□□□□□ -2.23
VRK3-204ENST00000593912 TRAV23DV6A0A075B6W5 121 aa1.1□□□□□ -2.23
VRK3-204ENST00000593912 IGLV5-45A0A087WSX0 123 aa1.1□□□□□ -2.23
VRK3-204ENST00000593912 A0A1B0GUT8 65 aa1.1□□□□□ -2.23
VRK3-204ENST00000593912 IGIPA6NJ69 53 aa1.1□□□□□ -2.23
VRK3-204ENST00000593912 LST1O00453 97 aa1.1□□□□□ -2.23
VRK3-204ENST00000593912 ZNF73O43830 326 aaPredicted RBP1.1□□□□□ -2.23
VRK3-204ENST00000593912 PPP1R17O96001 155 aa1.1□□□□□ -2.23
VRK3-204ENST00000593912 H2BFSP57053 126 aa1.1□□□□□ -2.23
VRK3-204ENST00000593912 SEC11AP67812 179 aa1.1□□□□□ -2.23
VRK3-204ENST00000593912 MRPL18Q9H0U6 180 aaKnown RBP1.1□□□□□ -2.23
VRK3-204ENST00000593912 BORCS7-ASMTA0A0B4J1R7 106 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 IGLV5-39A0A0G2JS06 123 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 TEX49A0A1B0GTD5 131 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 TINCRA0A1B0GVN0 87 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 COLCA2A8K830 154 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 SMIM13P0DJ93 91 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 MT1GP13640 62 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 CKS2P33552 79 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 LINC00310P59036 64 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 KRTAP12-4P60329 112 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 AKR1C8PQ5T2L2 129 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 KCNRGQ8N5I3 272 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 MIR7-3HGQ8N6C7 128 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 C11orf52Q96A22 123 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 BORCS7Q96B45 105 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 CYSLTR1Q9Y271 337 aa1.09□□□□□ -2.23
VRK3-204ENST00000593912 HIGD1CA8MV81 97 aa1.08□□□□□ -2.24
VRK3-204ENST00000593912 GATCO43716 136 aaKnown RBP1.08□□□□□ -2.24
VRK3-204ENST00000593912 LINC00313P59037 77 aa1.08□□□□□ -2.24
VRK3-204ENST00000593912 RPL23P62829 140 aaKnown RBP1.08□□□□□ -2.24
VRK3-204ENST00000593912 CCL20P78556 96 aa1.08□□□□□ -2.24
VRK3-204ENST00000593912 FAM104BQ5XKR9 115 aa1.08□□□□□ -2.24
VRK3-204ENST00000593912 PRR15Q8IV56 129 aa1.08□□□□□ -2.24
VRK3-204ENST00000593912 ATP6V1G1O75348 118 aa1.07□□□□□ -2.24
VRK3-204ENST00000593912 S100A7L2Q5SY68 101 aa1.07□□□□□ -2.24
VRK3-204ENST00000593912 TRIQKQ629K1 86 aa1.07□□□□□ -2.24
VRK3-204ENST00000593912 PP632Q6XCG6 107 aa1.07□□□□□ -2.24
VRK3-204ENST00000593912 FA2HQ7L5A8 372 aa1.07□□□□□ -2.24
VRK3-204ENST00000593912 OCC1Q8TAD7 63 aa1.07□□□□□ -2.24
VRK3-204ENST00000593912 SFT2D1Q8WV19 159 aa1.07□□□□□ -2.24
VRK3-204ENST00000593912 PLAC4Q8WY50 150 aa1.07□□□□□ -2.24
VRK3-204ENST00000593912 SMIM12Q96EX1 92 aa1.07□□□□□ -2.24
VRK3-204ENST00000593912 DHRS4-AS1Q9P1J3 65 aa1.07□□□□□ -2.24
VRK3-204ENST00000593912 TRBV10-2A0A0K0K1G8 114 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 LINC00862A6NCI5 91 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 CENPXA8MT69 81 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 HMSDA8MTL9 139 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 KRTAP9-6A8MVA2 160 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 PLA2G10O15496 165 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 PET100P0DJ07 73 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 ADCYAP1P18509 176 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 FAM213BQ8TBF2 198 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 SIGMAR1Q99720 223 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 CST9LQ9H4G1 147 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 NXT2Q9NPJ8 142 aaKnown RBP1.06□□□□□ -2.24
VRK3-204ENST00000593912 BIN3Q9NQY0 253 aa1.06□□□□□ -2.24
VRK3-204ENST00000593912 IGLV5-48A0A075B6I7 105 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 A0A087WSZ3 146 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 H3BRM9 83 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 LYRM1O43325 122 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 ZNF22P17026 224 aaPredicted RBP1.05□□□□□ -2.24
VRK3-204ENST00000593912 HINT1P49773 126 aaPredicted RBP1.05□□□□□ -2.24
VRK3-204ENST00000593912 RIGQ13278 110 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 CNPY1Q3B7I2 92 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 ANKRD39Q53RE8 183 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 MEIG1Q5JSS6 88 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 ADAMTSL4-AS1Q5T5F5 129 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 KRTAP5-5Q701N2 237 aaPredicted RBP1.05□□□□□ -2.24
VRK3-204ENST00000593912 CLEC2BQ92478 149 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 GNG13Q9P2W3 67 aa1.05□□□□□ -2.24
VRK3-204ENST00000593912 IL7P13232 177 aa1.04□□□□□ -2.24
VRK3-204ENST00000593912 COX7BP24311 80 aa1.04□□□□□ -2.24
VRK3-204ENST00000593912 ELOF1P60002 83 aaKnown RBP1.04□□□□□ -2.24
VRK3-204ENST00000593912 MBD3L1Q8WWY6 194 aa1.04□□□□□ -2.24
VRK3-204ENST00000593912 Q9H521 79 aa1.04□□□□□ -2.24
VRK3-204ENST00000593912 BATF3Q9NR55 127 aa1.04□□□□□ -2.24
VRK3-204ENST00000593912 SPANXB1Q9NS25 103 aaPredicted RBP1.04□□□□□ -2.24
VRK3-204ENST00000593912 NHP2Q9NX24 153 aaKnown RBP1.04□□□□□ -2.24
VRK3-204ENST00000593912 CRIPTQ9P021 101 aa1.04□□□□□ -2.24
VRK3-204ENST00000593912 A0A0J9YXY3 114 aa1.03□□□□□ -2.24
VRK3-204ENST00000593912 F8WEM9 126 aa1.03□□□□□ -2.24
VRK3-204ENST00000593912 PDE6GP18545 87 aa1.03□□□□□ -2.24
VRK3-204ENST00000593912 CT83Q5H943 113 aa1.03□□□□□ -2.24
VRK3-204ENST00000593912 PAPPA-AS1Q5QFB9 102 aa1.03□□□□□ -2.24
VRK3-204ENST00000593912 PRELID3AQ96N28 172 aa1.03□□□□□ -2.24
VRK3-204ENST00000593912 IGHV6-1A0A0B4J1U7 121 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 A8MUN3 132 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 EIF4EBP3O60516 100 aaPredicted RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms