RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 DAND5Q8N907 189 aa5.78□□□□□ -1.48
VMP1-214ENST00000592106 KRTAP4-11Q9BYQ6 195 aa5.78□□□□□ -1.48
VMP1-214ENST00000592106 FAT4Q6V0I7 4981 aa5.78□□□□□ -1.48
VMP1-214ENST00000592106 KRTAP4-16G5E9R7 235 aaPredicted RBP5.77□□□□□ -1.49
VMP1-214ENST00000592106 LEPROTO15243 131 aa5.77□□□□□ -1.49
VMP1-214ENST00000592106 NMUP48645 174 aa5.77□□□□□ -1.49
VMP1-214ENST00000592106 LINC00483Q53H64 154 aa5.77□□□□□ -1.49
VMP1-214ENST00000592106 GAGE2AQ6NT46 116 aa5.77□□□□□ -1.49
VMP1-214ENST00000592106 SPANXB1Q9NS25 103 aaPredicted RBP5.77□□□□□ -1.49
VMP1-214ENST00000592106 HSPB8Q9UJY1 196 aa5.77□□□□□ -1.49
VMP1-214ENST00000592106 IGLV9-49A0A0B4J1Y8 123 aa5.76□□□□□ -1.49
VMP1-214ENST00000592106 LGALS3P17931 250 aaKnown RBP5.76□□□□□ -1.49
VMP1-214ENST00000592106 RPS29P62273 56 aaKnown RBP5.76□□□□□ -1.49
VMP1-214ENST00000592106 MOBPQ13875 183 aa5.76□□□□□ -1.49
VMP1-214ENST00000592106 JOSD1Q15040 202 aaPredicted RBP5.76□□□□□ -1.49
VMP1-214ENST00000592106 S100A7L2Q5SY68 101 aa5.76□□□□□ -1.49
VMP1-214ENST00000592106 SSBP3-AS1Q7Z2R9 100 aa5.76□□□□□ -1.49
VMP1-214ENST00000592106 YPEL4Q96NS1 127 aa5.76□□□□□ -1.49
VMP1-214ENST00000592106 CBY1Q9Y3M2 126 aa5.76□□□□□ -1.49
VMP1-214ENST00000592106 MUC2Q02817 5179 aa5.75□□□□□ -1.49
VMP1-214ENST00000592106 LOC107984156A0A0G2JMH3 177 aa5.75□□□□□ -1.49
VMP1-214ENST00000592106 J3QQQ9 107 aa5.75□□□□□ -1.49
VMP1-214ENST00000592106 DPM2O94777 84 aa5.75□□□□□ -1.49
VMP1-214ENST00000592106 ARL17AQ8IVW1 177 aa5.75□□□□□ -1.49
VMP1-214ENST00000592106 MUC17Q685J3 4493 aa5.74□□□□□ -1.49
VMP1-214ENST00000592106 NDUFC2O95298 119 aa5.74□□□□□ -1.49
VMP1-214ENST00000592106 TSPEAR-AS2P59090 65 aa5.74□□□□□ -1.49
VMP1-214ENST00000592106 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
VMP1-214ENST00000592106 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
VMP1-214ENST00000592106 Q6ZRX8 168 aa5.74□□□□□ -1.49
VMP1-214ENST00000592106 TRAV23DV6A0A075B6W5 121 aa5.73□□□□□ -1.49
VMP1-214ENST00000592106 SERF1AO75920 110 aa5.73□□□□□ -1.49
VMP1-214ENST00000592106 IGKCP01834 107 aa5.73□□□□□ -1.49
VMP1-214ENST00000592106 HINT1P49773 126 aaPredicted RBP5.73□□□□□ -1.49
VMP1-214ENST00000592106 C9orf153Q5TBE3 101 aa5.73□□□□□ -1.49
VMP1-214ENST00000592106 KRTAP4-2Q9BYR5 136 aa5.73□□□□□ -1.49
VMP1-214ENST00000592106 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
VMP1-214ENST00000592106 SLC25A20O43772 301 aa5.72□□□□□ -1.49
VMP1-214ENST00000592106 TRGC2P03986 189 aa5.72□□□□□ -1.49
VMP1-214ENST00000592106 ASB16-AS1Q495Z4 193 aa5.72□□□□□ -1.49
VMP1-214ENST00000592106 ERC2-IT1O76042 136 aa5.71□□□□□ -1.5
VMP1-214ENST00000592106 IGLV6-57P01721 117 aa5.71□□□□□ -1.5
VMP1-214ENST00000592106 FABP4P15090 132 aa5.71□□□□□ -1.5
VMP1-214ENST00000592106 Q8N377 158 aa5.71□□□□□ -1.5
VMP1-214ENST00000592106 Q9BRP9 147 aa5.71□□□□□ -1.5
VMP1-214ENST00000592106 C5orf52A6NGY3 159 aa5.69□□□□□ -1.5
VMP1-214ENST00000592106 ZNF73O43830 326 aaPredicted RBP5.69□□□□□ -1.5
VMP1-214ENST00000592106 LINC01547P58512 204 aaPredicted RBP5.69□□□□□ -1.5
VMP1-214ENST00000592106 SLC25A34Q6PIV7 304 aa5.69□□□□□ -1.5
VMP1-214ENST00000592106 PMCHL2Q9BQD1 86 aa5.69□□□□□ -1.5
VMP1-214ENST00000592106 NPC2P61916 151 aa5.68□□□□□ -1.5
VMP1-214ENST00000592106 A0A0J9YXY3 114 aa5.67□□□□□ -1.5
VMP1-214ENST00000592106 E9PLD3 99 aa5.67□□□□□ -1.5
VMP1-214ENST00000592106 LIMD2Q9BT23 127 aa5.67□□□□□ -1.5
VMP1-214ENST00000592106 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
VMP1-214ENST00000592106 OR13C6PQ8NH95 151 aa5.66□□□□□ -1.5
VMP1-214ENST00000592106 SPANXCQ9NY87 97 aa5.66□□□□□ -1.5
VMP1-214ENST00000592106 DHRS4-AS1Q9P1J3 65 aa5.66□□□□□ -1.5
VMP1-214ENST00000592106 SOSTDC1Q6X4U4 206 aa5.65□□□□□ -1.5
VMP1-214ENST00000592106 TIMM17BO60830 172 aa5.64□□□□□ -1.51
VMP1-214ENST00000592106 ST20-AS1Q8NBB2 130 aa5.64□□□□□ -1.51
VMP1-214ENST00000592106 SPANXDQ9BXN6 97 aa5.64□□□□□ -1.51
VMP1-214ENST00000592106 LAMTOR3Q9UHA4 124 aa5.64□□□□□ -1.51
VMP1-214ENST00000592106 ADAMTSL4-AS1Q5T5F5 129 aa5.63□□□□□ -1.51
VMP1-214ENST00000592106 LINC00308Q8TCZ7 52 aa5.63□□□□□ -1.51
VMP1-214ENST00000592106 ZNF815PA8K554 130 aa5.62□□□□□ -1.51
VMP1-214ENST00000592106 SYS1-DBNDD2H3BUS1 97 aa5.62□□□□□ -1.51
VMP1-214ENST00000592106 SPRR1BP22528 89 aa5.62□□□□□ -1.51
VMP1-214ENST00000592106 LINC00518Q8N0U6 118 aa5.62□□□□□ -1.51
VMP1-214ENST00000592106 COX7BP24311 80 aa5.61□□□□□ -1.51
VMP1-214ENST00000592106 COPS9Q8WXC6 57 aa5.61□□□□□ -1.51
VMP1-214ENST00000592106 COLCA2A8K830 154 aa5.6□□□□□ -1.51
VMP1-214ENST00000592106 ELOF1P60002 83 aaKnown RBP5.6□□□□□ -1.51
VMP1-214ENST00000592106 LINC01545Q5VT33 79 aa5.6□□□□□ -1.51
VMP1-214ENST00000592106 PET117Q6UWS5 81 aa5.6□□□□□ -1.51
VMP1-214ENST00000592106 LITAFQ99732 161 aa5.6□□□□□ -1.51
VMP1-214ENST00000592106 TAL2Q16559 108 aa5.59□□□□□ -1.51
VMP1-214ENST00000592106 C6orf99Q4VX62 202 aa5.59□□□□□ -1.51
VMP1-214ENST00000592106 HRCT1Q6UXD1 115 aa5.59□□□□□ -1.51
VMP1-214ENST00000592106 PRO1933Q9H354 126 aa5.59□□□□□ -1.51
VMP1-214ENST00000592106 CD164Q04900 197 aa5.58□□□□□ -1.52
VMP1-214ENST00000592106 KRTAP4-1Q9BYQ7 146 aa5.58□□□□□ -1.52
VMP1-214ENST00000592106 TEX49A0A1B0GTD5 131 aa5.57□□□□□ -1.52
VMP1-214ENST00000592106 C20orf202A1L168 122 aa5.57□□□□□ -1.52
VMP1-214ENST00000592106 H7C2G1 150 aa5.57□□□□□ -1.52
VMP1-214ENST00000592106 SCGB1D4Q6XE38 83 aa5.57□□□□□ -1.52
VMP1-214ENST00000592106 TRBV7-6A0A0J9YX20 115 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 A0A1B0GWB2 263 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 HIST1H2BKO60814 126 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 HIST1H2BJP06899 126 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 HIST1H2BOP23527 126 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 HIST1H2BBP33778 126 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 HIST1H2BDP58876 126 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 HIST1H2BCP62807 126 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 HIST2H2BEQ16778 126 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 Q1RN00 199 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.56□□□□□ -1.52
VMP1-214ENST00000592106 DEFB105AQ8NG35 78 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 HIST1H2BHQ93079 126 aa5.56□□□□□ -1.52
VMP1-214ENST00000592106 HIST1H2BNQ99877 126 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms