RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SMCR5Q8TEV8 140 aa5.99□□□□□ -1.45
BRCA1-227ENST00000591849 SPANXCQ9NY87 97 aa5.99□□□□□ -1.45
BRCA1-227ENST00000591849 TRAV23DV6A0A075B6W5 121 aa5.98□□□□□ -1.45
BRCA1-227ENST00000591849 FAM229BQ4G0N7 80 aa5.98□□□□□ -1.45
BRCA1-227ENST00000591849 LINC00518Q8N0U6 118 aa5.98□□□□□ -1.45
BRCA1-227ENST00000591849 LITAFQ99732 161 aa5.98□□□□□ -1.45
BRCA1-227ENST00000591849 A0A087X002 238 aa5.97□□□□□ -1.45
BRCA1-227ENST00000591849 EIF4EBP3O60516 100 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-227ENST00000591849 TSPAN13O95857 204 aa5.97□□□□□ -1.45
BRCA1-227ENST00000591849 IGLV6-57P01721 117 aa5.97□□□□□ -1.45
BRCA1-227ENST00000591849 SPRR1AP35321 89 aa5.97□□□□□ -1.45
BRCA1-227ENST00000591849 PCP2Q8IVA1 136 aa5.97□□□□□ -1.45
BRCA1-227ENST00000591849 B5MCH6 92 aa5.96□□□□□ -1.46
BRCA1-227ENST00000591849 IFITM1P13164 125 aa5.96□□□□□ -1.46
BRCA1-227ENST00000591849 PYY3Q5JQD4 70 aa5.96□□□□□ -1.46
BRCA1-227ENST00000591849 Q6ZVH6 145 aa5.96□□□□□ -1.46
BRCA1-227ENST00000591849 SPRR4Q96PI1 79 aa5.96□□□□□ -1.46
BRCA1-227ENST00000591849 SPANXDQ9BXN6 97 aa5.96□□□□□ -1.46
BRCA1-227ENST00000591849 LRP2P98164 4655 aa5.96□□□□□ -1.46
BRCA1-227ENST00000591849 TNXBP22105 4242 aa5.95□□□□□ -1.46
BRCA1-227ENST00000591849 ZNF73O43830 326 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-227ENST00000591849 C12orf57Q99622 126 aa5.95□□□□□ -1.46
BRCA1-227ENST00000591849 PPDPFQ9H3Y8 114 aa5.95□□□□□ -1.46
BRCA1-227ENST00000591849 KRTAP4-16G5E9R7 235 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-227ENST00000591849 GAGE2AQ6NT46 116 aa5.94□□□□□ -1.46
BRCA1-227ENST00000591849 MUSTN1Q8IVN3 82 aa5.94□□□□□ -1.46
BRCA1-227ENST00000591849 A6NDN8 102 aa5.93□□□□□ -1.46
BRCA1-227ENST00000591849 PRR4Q16378 134 aa5.93□□□□□ -1.46
BRCA1-227ENST00000591849 KRTAP13-2Q52LG2 175 aa5.93□□□□□ -1.46
BRCA1-227ENST00000591849 C4orf48Q5BLP8 95 aa5.93□□□□□ -1.46
BRCA1-227ENST00000591849 Q6ZRX8 168 aa5.93□□□□□ -1.46
BRCA1-227ENST00000591849 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
BRCA1-227ENST00000591849 C3orf22Q8N5N4 141 aa5.92□□□□□ -1.46
BRCA1-227ENST00000591849 VAMP8Q9BV40 100 aa5.92□□□□□ -1.46
BRCA1-227ENST00000591849 RNF213Q63HN8 5207 aa5.92□□□□□ -1.46
BRCA1-227ENST00000591849 COX7BP24311 80 aa5.91□□□□□ -1.46
BRCA1-227ENST00000591849 TRAV13-2A0A0B4J235 113 aa5.9□□□□□ -1.46
BRCA1-227ENST00000591849 ERC2-IT1O76042 136 aa5.9□□□□□ -1.46
BRCA1-227ENST00000591849 Q9BRP9 147 aa5.9□□□□□ -1.46
BRCA1-227ENST00000591849 DHRS4-AS1Q9P1J3 65 aa5.9□□□□□ -1.46
BRCA1-227ENST00000591849 IGLV9-49A0A0B4J1Y8 123 aa5.89□□□□□ -1.47
BRCA1-227ENST00000591849 TSTD3H0UI37 97 aa5.89□□□□□ -1.47
BRCA1-227ENST00000591849 C6orf99Q4VX62 202 aa5.89□□□□□ -1.47
BRCA1-227ENST00000591849 SPAG11AQ6PDA7 123 aa5.88□□□□□ -1.47
BRCA1-227ENST00000591849 HIST1H4GQ99525 98 aa5.88□□□□□ -1.47
BRCA1-227ENST00000591849 COX8AP10176 69 aa5.87□□□□□ -1.47
BRCA1-227ENST00000591849 LINC00483Q53H64 154 aa5.87□□□□□ -1.47
BRCA1-227ENST00000591849 C9orf153Q5TBE3 101 aa5.87□□□□□ -1.47
BRCA1-227ENST00000591849 MOBPQ13875 183 aa5.86□□□□□ -1.47
BRCA1-227ENST00000591849 TAL2Q16559 108 aa5.86□□□□□ -1.47
BRCA1-227ENST00000591849 SPATA45Q537H7 98 aa5.86□□□□□ -1.47
BRCA1-227ENST00000591849 SLC25A34Q6PIV7 304 aa5.86□□□□□ -1.47
BRCA1-227ENST00000591849 ST20-AS1Q8NBB2 130 aa5.86□□□□□ -1.47
BRCA1-227ENST00000591849 Q8NBF4 154 aa5.86□□□□□ -1.47
BRCA1-227ENST00000591849 C14orf144Q96I85 54 aa5.86□□□□□ -1.47
BRCA1-227ENST00000591849 PAM16Q9Y3D7 125 aa5.86□□□□□ -1.47
BRCA1-227ENST00000591849 TRBV7-6A0A0J9YX20 115 aa5.85□□□□□ -1.47
BRCA1-227ENST00000591849 A0A1B0GWB2 263 aa5.85□□□□□ -1.47
BRCA1-227ENST00000591849 A4D1N5 150 aa5.85□□□□□ -1.47
BRCA1-227ENST00000591849 ELOF1P60002 83 aaKnown RBP5.85□□□□□ -1.47
BRCA1-227ENST00000591849 CTAG1AP78358 180 aa5.85□□□□□ -1.47
BRCA1-227ENST00000591849 VAMP3Q15836 100 aa5.85□□□□□ -1.47
BRCA1-227ENST00000591849 SSBP3-AS1Q7Z2R9 100 aa5.85□□□□□ -1.47
BRCA1-227ENST00000591849 DEFB105AQ8NG35 78 aa5.85□□□□□ -1.47
BRCA1-227ENST00000591849 SMIM11BQ8TCY0 68 aa5.84□□□□□ -1.47
BRCA1-227ENST00000591849 LAMTOR3Q9UHA4 124 aa5.84□□□□□ -1.47
BRCA1-227ENST00000591849 DLEU1O43261 78 aa5.83□□□□□ -1.48
BRCA1-227ENST00000591849 SLC25A20O43772 301 aa5.83□□□□□ -1.48
BRCA1-227ENST00000591849 RETNLBQ9BQ08 111 aa5.83□□□□□ -1.48
BRCA1-227ENST00000591849 NHP2Q9NX24 153 aaKnown RBP5.83□□□□□ -1.48
BRCA1-227ENST00000591849 UQCR10Q9UDW1 63 aa5.83□□□□□ -1.48
BRCA1-227ENST00000591849 SPINK1P00995 79 aa5.81□□□□□ -1.48
BRCA1-227ENST00000591849 TEX49A0A1B0GTD5 131 aa5.8□□□□□ -1.48
BRCA1-227ENST00000591849 RAB37Q96AX2 223 aa5.8□□□□□ -1.48
BRCA1-227ENST00000591849 IGLV7-46A0A075B6I9 117 aa5.79□□□□□ -1.48
BRCA1-227ENST00000591849 H7C2G1 150 aa5.79□□□□□ -1.48
BRCA1-227ENST00000591849 SPRR1BP22528 89 aa5.79□□□□□ -1.48
BRCA1-227ENST00000591849 PRO1933Q9H354 126 aa5.79□□□□□ -1.48
BRCA1-227ENST00000591849 HIGD1BQ9P298 99 aa5.79□□□□□ -1.48
BRCA1-227ENST00000591849 Q1RN00 199 aa5.78□□□□□ -1.48
BRCA1-227ENST00000591849 PCP4L1A6NKN8 68 aa5.77□□□□□ -1.49
BRCA1-227ENST00000591849 SNCGO76070 127 aa5.77□□□□□ -1.49
BRCA1-227ENST00000591849 HRCT1Q6UXD1 115 aa5.77□□□□□ -1.49
BRCA1-227ENST00000591849 TMEM238LA0A1B0GVL6 79 aa5.76□□□□□ -1.49
BRCA1-227ENST00000591849 hADV29S1A0JD25 119 aa5.76□□□□□ -1.49
BRCA1-227ENST00000591849 A6NJY4 79 aa5.76□□□□□ -1.49
BRCA1-227ENST00000591849 BVES-AS1Q5T3Y7 98 aa5.76□□□□□ -1.49
BRCA1-227ENST00000591849 LINC00575Q6W349 94 aa5.76□□□□□ -1.49
BRCA1-227ENST00000591849 F8WEM9 126 aa5.75□□□□□ -1.49
BRCA1-227ENST00000591849 CFC1BP0CG36 223 aa5.75□□□□□ -1.49
BRCA1-227ENST00000591849 CFC1P0CG37 223 aa5.75□□□□□ -1.49
BRCA1-227ENST00000591849 C2orf91Q6ZV80 131 aa5.75□□□□□ -1.49
BRCA1-227ENST00000591849 FP248Q71RG6 208 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-227ENST00000591849 CEND1Q8N111 149 aa5.75□□□□□ -1.49
BRCA1-227ENST00000591849 CDIP1Q9H305 208 aa5.75□□□□□ -1.49
BRCA1-227ENST00000591849 RPS29P62273 56 aaKnown RBP5.74□□□□□ -1.49
BRCA1-227ENST00000591849 IGLV5-48A0A075B6I7 105 aa5.73□□□□□ -1.49
BRCA1-227ENST00000591849 A0A0B4J2C4 111 aa5.73□□□□□ -1.49
BRCA1-227ENST00000591849 M0R143 59 aa5.73□□□□□ -1.49
BRCA1-227ENST00000591849 Q6ZQY7 126 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms