RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MUC2Q02817 5179 aa6.11□□□□□ -1.43
VPS4B-207ENST00000591519 IGKV2D-26A0A0A0MRZ7 120 aa6.11□□□□□ -1.43
VPS4B-207ENST00000591519 LINC00587B1AMM8 73 aa6.11□□□□□ -1.43
VPS4B-207ENST00000591519 KRTAP13-1Q8IUC0 172 aa6.11□□□□□ -1.43
VPS4B-207ENST00000591519 TTTY13Q9BZ97 58 aa6.11□□□□□ -1.43
VPS4B-207ENST00000591519 A0A0J9YXY3 114 aa6.1□□□□□ -1.43
VPS4B-207ENST00000591519 TMEM238C9JI98 176 aa6.1□□□□□ -1.43
VPS4B-207ENST00000591519 TSPAN13O95857 204 aa6.1□□□□□ -1.43
VPS4B-207ENST00000591519 SNRPEP62304 92 aaKnown RBP6.1□□□□□ -1.43
VPS4B-207ENST00000591519 TYMSOSQ8TAI1 123 aa6.1□□□□□ -1.43
VPS4B-207ENST00000591519 HIST1H2BLQ99880 126 aa6.1□□□□□ -1.43
VPS4B-207ENST00000591519 ZNF815PA8K554 130 aa6.09□□□□□ -1.43
VPS4B-207ENST00000591519 UBE2AP49459 152 aa6.09□□□□□ -1.43
VPS4B-207ENST00000591519 M0R378 163 aa6.08□□□□□ -1.44
VPS4B-207ENST00000591519 CTAG1AP78358 180 aa6.08□□□□□ -1.44
VPS4B-207ENST00000591519 FAM229BQ4G0N7 80 aa6.08□□□□□ -1.44
VPS4B-207ENST00000591519 ADAMTSL4-AS1Q5T5F5 129 aa6.08□□□□□ -1.44
VPS4B-207ENST00000591519 FAM19A1Q7Z5A9 133 aa6.08□□□□□ -1.44
VPS4B-207ENST00000591519 MIEN1Q9BRT3 115 aa6.08□□□□□ -1.44
VPS4B-207ENST00000591519 PRLHP81277 87 aa6.07□□□□□ -1.44
VPS4B-207ENST00000591519 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
VPS4B-207ENST00000591519 TMEM126AQ9H061 195 aa6.07□□□□□ -1.44
VPS4B-207ENST00000591519 ANAPC11Q9NYG5 84 aa6.07□□□□□ -1.44
VPS4B-207ENST00000591519 SOSTDC1Q6X4U4 206 aa6.06□□□□□ -1.44
VPS4B-207ENST00000591519 A0A0U1RQV1 116 aa6.05□□□□□ -1.44
VPS4B-207ENST00000591519 TRBV10-3A0A0K0K1G6 114 aa6.04□□□□□ -1.44
VPS4B-207ENST00000591519 C5orf52A6NGY3 159 aa6.04□□□□□ -1.44
VPS4B-207ENST00000591519 SCGB1D1O95968 90 aa6.04□□□□□ -1.44
VPS4B-207ENST00000591519 SCGB1D4Q6XE38 83 aa6.04□□□□□ -1.44
VPS4B-207ENST00000591519 PCP2Q8IVA1 136 aa6.04□□□□□ -1.44
VPS4B-207ENST00000591519 LITAFQ99732 161 aa6.04□□□□□ -1.44
VPS4B-207ENST00000591519 DDTP30046 118 aa6.03□□□□□ -1.44
VPS4B-207ENST00000591519 LOC107984156A0A0G2JMH3 177 aa6.02□□□□□ -1.45
VPS4B-207ENST00000591519 HSBP1L1C9JCN9 74 aa6.02□□□□□ -1.45
VPS4B-207ENST00000591519 PRYO14603 147 aa6.02□□□□□ -1.45
VPS4B-207ENST00000591519 AKR1D1P51857 326 aa6.02□□□□□ -1.45
VPS4B-207ENST00000591519 S100A7L2Q5SY68 101 aa6.02□□□□□ -1.45
VPS4B-207ENST00000591519 ARL17AQ8IVW1 177 aa6.02□□□□□ -1.45
VPS4B-207ENST00000591519 LINC00304Q8N9R0 145 aa6.02□□□□□ -1.45
VPS4B-207ENST00000591519 LINC00308Q8TCZ7 52 aa6.02□□□□□ -1.45
VPS4B-207ENST00000591519 HIGD2AQ9BW72 106 aa6.02□□□□□ -1.45
VPS4B-207ENST00000591519 SPANXB1Q9NS25 103 aaPredicted RBP6.02□□□□□ -1.45
VPS4B-207ENST00000591519 TIMM17BO60830 172 aa6.01□□□□□ -1.45
VPS4B-207ENST00000591519 TMA7Q9Y2S6 64 aaKnown RBP6.01□□□□□ -1.45
VPS4B-207ENST00000591519 TRBV10-2A0A0K0K1G8 114 aa6□□□□□ -1.45
VPS4B-207ENST00000591519 ETDCA0A1B0GVM5 59 aa6□□□□□ -1.45
VPS4B-207ENST00000591519 NDUFC2O95298 119 aa6□□□□□ -1.45
VPS4B-207ENST00000591519 S100A12P80511 92 aa6□□□□□ -1.45
VPS4B-207ENST00000591519 TPRXLQ17RH7 258 aa6□□□□□ -1.45
VPS4B-207ENST00000591519 OR13C6PQ8NH95 151 aa6□□□□□ -1.45
VPS4B-207ENST00000591519 KCNQ1DNQ9H478 68 aa6□□□□□ -1.45
VPS4B-207ENST00000591519 RETNLBQ9BQ08 111 aa5.98□□□□□ -1.45
VPS4B-207ENST00000591519 SPANXDQ9BXN6 97 aa5.98□□□□□ -1.45
VPS4B-207ENST00000591519 SPANXCQ9NY87 97 aa5.98□□□□□ -1.45
VPS4B-207ENST00000591519 IGLV7-46A0A075B6I9 117 aa5.97□□□□□ -1.45
VPS4B-207ENST00000591519 TRAV23DV6A0A075B6W5 121 aa5.97□□□□□ -1.45
VPS4B-207ENST00000591519 IGLV6-57P01721 117 aa5.97□□□□□ -1.45
VPS4B-207ENST00000591519 SPAG11AQ6PDA7 123 aa5.97□□□□□ -1.45
VPS4B-207ENST00000591519 MUSTN1Q8IVN3 82 aa5.97□□□□□ -1.45
VPS4B-207ENST00000591519 LINC00337Q8N6G1 96 aa5.97□□□□□ -1.45
VPS4B-207ENST00000591519 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
VPS4B-207ENST00000591519 SPRR1AP35321 89 aa5.96□□□□□ -1.46
VPS4B-207ENST00000591519 SMCR5Q8TEV8 140 aa5.96□□□□□ -1.46
VPS4B-207ENST00000591519 B5MCH6 92 aa5.95□□□□□ -1.46
VPS4B-207ENST00000591519 KRTAP4-16G5E9R7 235 aaPredicted RBP5.95□□□□□ -1.46
VPS4B-207ENST00000591519 C3orf22Q8N5N4 141 aa5.95□□□□□ -1.46
VPS4B-207ENST00000591519 SPRR4Q96PI1 79 aa5.95□□□□□ -1.46
VPS4B-207ENST00000591519 PPDPFQ9H3Y8 114 aa5.95□□□□□ -1.46
VPS4B-207ENST00000591519 PAM16Q9Y3D7 125 aa5.95□□□□□ -1.46
VPS4B-207ENST00000591519 FAT4Q6V0I7 4981 aa5.94□□□□□ -1.46
VPS4B-207ENST00000591519 ZNF73O43830 326 aaPredicted RBP5.94□□□□□ -1.46
VPS4B-207ENST00000591519 ERC2-IT1O76042 136 aa5.94□□□□□ -1.46
VPS4B-207ENST00000591519 IFITM1P13164 125 aa5.94□□□□□ -1.46
VPS4B-207ENST00000591519 SPATA45Q537H7 98 aa5.93□□□□□ -1.46
VPS4B-207ENST00000591519 FP248Q71RG6 208 aaPredicted RBP5.93□□□□□ -1.46
VPS4B-207ENST00000591519 LINC00518Q8N0U6 118 aa5.93□□□□□ -1.46
VPS4B-207ENST00000591519 COPS9Q8WXC6 57 aa5.93□□□□□ -1.46
VPS4B-207ENST00000591519 C14orf144Q96I85 54 aa5.93□□□□□ -1.46
VPS4B-207ENST00000591519 Q9BRP9 147 aa5.93□□□□□ -1.46
VPS4B-207ENST00000591519 A6NDN8 102 aa5.92□□□□□ -1.46
VPS4B-207ENST00000591519 GAGE2AQ6NT46 116 aa5.92□□□□□ -1.46
VPS4B-207ENST00000591519 Q6ZRX8 168 aa5.92□□□□□ -1.46
VPS4B-207ENST00000591519 Q6ZVH6 145 aa5.92□□□□□ -1.46
VPS4B-207ENST00000591519 VAMP8Q9BV40 100 aa5.92□□□□□ -1.46
VPS4B-207ENST00000591519 ZNF706Q9Y5V0 76 aaPredicted RBP5.92□□□□□ -1.46
VPS4B-207ENST00000591519 COX8AP10176 69 aa5.91□□□□□ -1.46
VPS4B-207ENST00000591519 HINT1P49773 126 aaPredicted RBP5.91□□□□□ -1.46
VPS4B-207ENST00000591519 JOSD1Q15040 202 aaPredicted RBP5.91□□□□□ -1.46
VPS4B-207ENST00000591519 C12orf57Q99622 126 aa5.91□□□□□ -1.46
VPS4B-207ENST00000591519 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
VPS4B-207ENST00000591519 C6orf99Q4VX62 202 aa5.9□□□□□ -1.46
VPS4B-207ENST00000591519 HIST1H4GQ99525 98 aa5.9□□□□□ -1.46
VPS4B-207ENST00000591519 CBY1Q9Y3M2 126 aa5.9□□□□□ -1.46
VPS4B-207ENST00000591519 SPINK1P00995 79 aa5.89□□□□□ -1.47
VPS4B-207ENST00000591519 COX7BP24311 80 aa5.89□□□□□ -1.47
VPS4B-207ENST00000591519 LINC00483Q53H64 154 aa5.89□□□□□ -1.47
VPS4B-207ENST00000591519 ST20-AS1Q8NBB2 130 aa5.89□□□□□ -1.47
VPS4B-207ENST00000591519 IGLV9-49A0A0B4J1Y8 123 aa5.88□□□□□ -1.47
VPS4B-207ENST00000591519 A4D1N5 150 aa5.88□□□□□ -1.47
VPS4B-207ENST00000591519 KRTAP13-3Q3SY46 172 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms