RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 Q9BRP9 147 aa11.83□□□□□ -0.52
CIRBP-226ENST00000590171 Q6ZRX8 168 aa11.82□□□□□ -0.52
CIRBP-226ENST00000590171 TRAV23DV6A0A075B6W5 121 aa11.81□□□□□ -0.52
CIRBP-226ENST00000590171 C20orf202A1L168 122 aa11.81□□□□□ -0.52
CIRBP-226ENST00000590171 GAGE2AQ6NT46 116 aa11.81□□□□□ -0.52
CIRBP-226ENST00000590171 SPAG11AQ6PDA7 123 aa11.81□□□□□ -0.52
CIRBP-226ENST00000590171 Q8NBF4 154 aa11.8□□□□□ -0.52
CIRBP-226ENST00000590171 TTTY13Q9BZ97 58 aa11.8□□□□□ -0.52
CIRBP-226ENST00000590171 TIMM17BO60830 172 aa11.79□□□□□ -0.52
CIRBP-226ENST00000590171 LINC00308Q8TCZ7 52 aa11.79□□□□□ -0.52
CIRBP-226ENST00000590171 ZNF815PA8K554 130 aa11.78□□□□□ -0.52
CIRBP-226ENST00000590171 MUC2Q02817 5179 aa11.78□□□□□ -0.52
CIRBP-226ENST00000590171 IGLV7-46A0A075B6I9 117 aa11.77□□□□□ -0.53
CIRBP-226ENST00000590171 ZNF73O43830 326 aaPredicted RBP11.77□□□□□ -0.53
CIRBP-226ENST00000590171 SPANXCQ9NY87 97 aa11.77□□□□□ -0.53
CIRBP-226ENST00000590171 C4orf48Q5BLP8 95 aa11.76□□□□□ -0.53
CIRBP-226ENST00000590171 TPRXLQ17RH7 258 aa11.75□□□□□ -0.53
CIRBP-226ENST00000590171 S100A2P29034 98 aa11.74□□□□□ -0.53
CIRBP-226ENST00000590171 JOSD1Q15040 202 aaPredicted RBP11.74□□□□□ -0.53
CIRBP-226ENST00000590171 IGLV9-49A0A0B4J1Y8 123 aa11.73□□□□□ -0.53
CIRBP-226ENST00000590171 MOBPQ13875 183 aa11.73□□□□□ -0.53
CIRBP-226ENST00000590171 ATOH7Q8N100 152 aa11.73□□□□□ -0.53
CIRBP-226ENST00000590171 HIST3H2BBQ8N257 126 aa11.73□□□□□ -0.53
CIRBP-226ENST00000590171 S100A6P06703 90 aa11.72□□□□□ -0.53
CIRBP-226ENST00000590171 AKR1D1P51857 326 aa11.72□□□□□ -0.53
CIRBP-226ENST00000590171 OR13C6PQ8NH95 151 aa11.71□□□□□ -0.53
CIRBP-226ENST00000590171 CDIP1Q9H305 208 aa11.71□□□□□ -0.53
CIRBP-226ENST00000590171 SPINK1P00995 79 aa11.7□□□□□ -0.54
CIRBP-226ENST00000590171 ANKRD39Q53RE8 183 aa11.7□□□□□ -0.54
CIRBP-226ENST00000590171 HIST1H2BLQ99880 126 aa11.7□□□□□ -0.54
CIRBP-226ENST00000590171 CBY1Q9Y3M2 126 aa11.7□□□□□ -0.54
CIRBP-226ENST00000590171 SSBP3-AS1Q7Z2R9 100 aa11.69□□□□□ -0.54
CIRBP-226ENST00000590171 ST20-AS1Q8NBB2 130 aa11.69□□□□□ -0.54
CIRBP-226ENST00000590171 HINT1P49773 126 aaPredicted RBP11.68□□□□□ -0.54
CIRBP-226ENST00000590171 SPANXDQ9BXN6 97 aa11.68□□□□□ -0.54
CIRBP-226ENST00000590171 MUC17Q685J3 4493 aa11.67□□□□□ -0.54
CIRBP-226ENST00000590171 FP248Q71RG6 208 aaPredicted RBP11.67□□□□□ -0.54
CIRBP-226ENST00000590171 SCGB1D4Q6XE38 83 aa11.66□□□□□ -0.54
CIRBP-226ENST00000590171 LINC00518Q8N0U6 118 aa11.64□□□□□ -0.55
CIRBP-226ENST00000590171 C5orf52A6NGY3 159 aa11.63□□□□□ -0.55
CIRBP-226ENST00000590171 RPS29P62273 56 aaKnown RBP11.62□□□□□ -0.55
CIRBP-226ENST00000590171 SNRPEP62304 92 aaKnown RBP11.62□□□□□ -0.55
CIRBP-226ENST00000590171 C9orf153Q5TBE3 101 aa11.62□□□□□ -0.55
CIRBP-226ENST00000590171 PCP2Q8IVA1 136 aa11.61□□□□□ -0.55
CIRBP-226ENST00000590171 DHRS4-AS1Q9P1J3 65 aa11.61□□□□□ -0.55
CIRBP-226ENST00000590171 ELOF1P60002 83 aaKnown RBP11.6□□□□□ -0.55
CIRBP-226ENST00000590171 C6orf99Q4VX62 202 aa11.6□□□□□ -0.55
CIRBP-226ENST00000590171 Q8N377 158 aa11.6□□□□□ -0.55
CIRBP-226ENST00000590171 SPRR1BP22528 89 aa11.59□□□□□ -0.55
CIRBP-226ENST00000590171 COX7BP24311 80 aa11.59□□□□□ -0.55
CIRBP-226ENST00000590171 KRTAP13-3Q3SY46 172 aa11.59□□□□□ -0.55
CIRBP-226ENST00000590171 HSBP1L1C9JCN9 74 aa11.58□□□□□ -0.56
CIRBP-226ENST00000590171 IFITM1P13164 125 aa11.58□□□□□ -0.56
CIRBP-226ENST00000590171 COPS9Q8WXC6 57 aa11.57□□□□□ -0.56
CIRBP-226ENST00000590171 A0A0U1RQV1 116 aa11.56□□□□□ -0.56
CIRBP-226ENST00000590171 Q6ZVH6 145 aa11.56□□□□□ -0.56
CIRBP-226ENST00000590171 MUSTN1Q8IVN3 82 aa11.56□□□□□ -0.56
CIRBP-226ENST00000590171 SLC25A20O43772 301 aa11.54□□□□□ -0.56
CIRBP-226ENST00000590171 SCGB1D1O95968 90 aa11.53□□□□□ -0.56
CIRBP-226ENST00000590171 SLC25A34Q6PIV7 304 aa11.53□□□□□ -0.56
CIRBP-226ENST00000590171 A6NDN8 102 aa11.52□□□□□ -0.57
CIRBP-226ENST00000590171 TRBV7-6A0A0J9YX20 115 aa11.51□□□□□ -0.57
CIRBP-226ENST00000590171 LAMTOR3Q9UHA4 124 aa11.5□□□□□ -0.57
CIRBP-226ENST00000590171 A0A1B0GWB2 263 aa11.49□□□□□ -0.57
CIRBP-226ENST00000590171 TAL2Q16559 108 aa11.48□□□□□ -0.57
CIRBP-226ENST00000590171 DEFB105AQ8NG35 78 aa11.48□□□□□ -0.57
CIRBP-226ENST00000590171 FAT4Q6V0I7 4981 aa11.47□□□□□ -0.57
CIRBP-226ENST00000590171 Q1RN00 199 aa11.46□□□□□ -0.57
CIRBP-226ENST00000590171 HRCT1Q6UXD1 115 aa11.46□□□□□ -0.57
CIRBP-226ENST00000590171 TRAV13-2A0A0B4J235 113 aa11.45□□□□□ -0.58
CIRBP-226ENST00000590171 TEX49A0A1B0GTD5 131 aa11.45□□□□□ -0.58
CIRBP-226ENST00000590171 SMIM11BQ8TCY0 68 aa11.44□□□□□ -0.58
CIRBP-226ENST00000590171 LINC01547P58512 204 aaPredicted RBP11.43□□□□□ -0.58
CIRBP-226ENST00000590171 ASB16-AS1Q495Z4 193 aa11.43□□□□□ -0.58
CIRBP-226ENST00000590171 SMIM29Q86T20 159 aa11.43□□□□□ -0.58
CIRBP-226ENST00000590171 IGLV5-48A0A075B6I7 105 aa11.42□□□□□ -0.58
CIRBP-226ENST00000590171 LIMD2Q9BT23 127 aa11.42□□□□□ -0.58
CIRBP-226ENST00000590171 A4D1N5 150 aa11.41□□□□□ -0.58
CIRBP-226ENST00000590171 LCE2AQ5TA79 106 aaPredicted RBP11.4□□□□□ -0.58
CIRBP-226ENST00000590171 PRO1933Q9H354 126 aa11.4□□□□□ -0.58
CIRBP-226ENST00000590171 COX8AP10176 69 aa11.39□□□□□ -0.59
CIRBP-226ENST00000590171 CD164Q04900 197 aa11.37□□□□□ -0.59
CIRBP-226ENST00000590171 NHP2Q9NX24 153 aaKnown RBP11.37□□□□□ -0.59
CIRBP-226ENST00000590171 SEC61BP60468 96 aaKnown RBP11.36□□□□□ -0.59
CIRBP-226ENST00000590171 XP32Q5T750 250 aa11.36□□□□□ -0.59
CIRBP-226ENST00000590171 PAM16Q9Y3D7 125 aa11.35□□□□□ -0.59
CIRBP-226ENST00000590171 SPATA45Q537H7 98 aa11.34□□□□□ -0.59
CIRBP-226ENST00000590171 HIST1H4GQ99525 98 aa11.34□□□□□ -0.59
CIRBP-226ENST00000590171 KRTAP4-1Q9BYQ7 146 aa11.34□□□□□ -0.59
CIRBP-226ENST00000590171 A0A0G2JQZ4 141 aa11.33□□□□□ -0.6
CIRBP-226ENST00000590171 H7C2G1 150 aa11.33□□□□□ -0.6
CIRBP-226ENST00000590171 VAMP8Q9BV40 100 aa11.33□□□□□ -0.6
CIRBP-226ENST00000590171 DLEU1O43261 78 aa11.32□□□□□ -0.6
CIRBP-226ENST00000590171 VAMP3Q15836 100 aa11.31□□□□□ -0.6
CIRBP-226ENST00000590171 LINC00575Q6W349 94 aa11.31□□□□□ -0.6
CIRBP-226ENST00000590171 C14orf144Q96I85 54 aa11.31□□□□□ -0.6
CIRBP-226ENST00000590171 C12orf57Q99622 126 aa11.29□□□□□ -0.6
CIRBP-226ENST00000590171 Q5XG85 94 aa11.28□□□□□ -0.6
CIRBP-226ENST00000590171 TMA7Q9Y2S6 64 aaKnown RBP11.27□□□□□ -0.61
CIRBP-226ENST00000590171 C9orf92A6NGG3 77 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms