RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	SPANXC	Q9NY87	97 aa		10.08	□□□□□ -0.8
MBD1-221	ENST00000589867	SNRPE	P62304	92 aa	Known RBP	10.07	□□□□□ -0.8
MBD1-221	ENST00000589867	SPANXD	Q9BXN6	97 aa		10.07	□□□□□ -0.8
MBD1-221	ENST00000589867	TRAV23DV6	A0A075B6W5	121 aa		10.06	□□□□□ -0.8
MBD1-221	ENST00000589867	S100A2	P29034	98 aa		10.06	□□□□□ -0.8
MBD1-221	ENST00000589867	S100A7L2	Q5SY68	101 aa		10.06	□□□□□ -0.8
MBD1-221	ENST00000589867		Q6ZRX8	168 aa		10.06	□□□□□ -0.8
MBD1-221	ENST00000589867	C5orf52	A6NGY3	159 aa		10.05	□□□□□ -0.8
MBD1-221	ENST00000589867	TSPAN13	O95857	204 aa		10.05	□□□□□ -0.8
MBD1-221	ENST00000589867	S100A6	P06703	90 aa		10.04	□□□□□ -0.8
MBD1-221	ENST00000589867	ZNF73	O43830	326 aa	Predicted RBP	10.03	□□□□□ -0.8
MBD1-221	ENST00000589867	AKR1D1	P51857	326 aa		10.03	□□□□□ -0.8
MBD1-221	ENST00000589867	LINC00483	Q53H64	154 aa		10.03	□□□□□ -0.8
MBD1-221	ENST00000589867	S100A12	P80511	92 aa		10.02	□□□□□ -0.81
MBD1-221	ENST00000589867	SCGB1D4	Q6XE38	83 aa		10.02	□□□□□ -0.81
MBD1-221	ENST00000589867	LINC00304	Q8N9R0	145 aa		10.02	□□□□□ -0.81
MBD1-221	ENST00000589867	PPDPF	Q9H3Y8	114 aa		10.02	□□□□□ -0.81
MBD1-221	ENST00000589867	ZNF706	Q9Y5V0	76 aa	Predicted RBP	10.01	□□□□□ -0.81
MBD1-221	ENST00000589867	MUSTN1	Q8IVN3	82 aa		9.99	□□□□□ -0.81
MBD1-221	ENST00000589867	IFITM1	P13164	125 aa		9.98	□□□□□ -0.81
MBD1-221	ENST00000589867	GAGE2A	Q6NT46	116 aa		9.98	□□□□□ -0.81
MBD1-221	ENST00000589867	OR13C6P	Q8NH95	151 aa		9.98	□□□□□ -0.81
MBD1-221	ENST00000589867	RNF213	Q63HN8	5207 aa		9.98	□□□□□ -0.81
MBD1-221	ENST00000589867		Q6ZVH6	145 aa		9.97	□□□□□ -0.81
MBD1-221	ENST00000589867	LINC00518	Q8N0U6	118 aa		9.97	□□□□□ -0.81
MBD1-221	ENST00000589867	PRR4	Q16378	134 aa		9.96	□□□□□ -0.82
MBD1-221	ENST00000589867	ST20-AS1	Q8NBB2	130 aa		9.96	□□□□□ -0.82
MBD1-221	ENST00000589867	SCGB1D1	O95968	90 aa		9.93	□□□□□ -0.82
MBD1-221	ENST00000589867	JOSD1	Q15040	202 aa	Predicted RBP	9.93	□□□□□ -0.82
MBD1-221	ENST00000589867	C6orf99	Q4VX62	202 aa		9.93	□□□□□ -0.82
MBD1-221	ENST00000589867		Q8NBF4	154 aa		9.93	□□□□□ -0.82
MBD1-221	ENST00000589867	RETNLB	Q9BQ08	111 aa		9.93	□□□□□ -0.82
MBD1-221	ENST00000589867	ELOF1	P60002	83 aa	Known RBP	9.92	□□□□□ -0.82
MBD1-221	ENST00000589867	CBY1	Q9Y3M2	126 aa		9.92	□□□□□ -0.82
MBD1-221	ENST00000589867	HSBP1L1	C9JCN9	74 aa		9.91	□□□□□ -0.82
MBD1-221	ENST00000589867	CTAG1A	P78358	180 aa		9.91	□□□□□ -0.82
MBD1-221	ENST00000589867	COPS9	Q8WXC6	57 aa		9.9	□□□□□ -0.82
MBD1-221	ENST00000589867	COX7B	P24311	80 aa		9.89	□□□□□ -0.83
MBD1-221	ENST00000589867	MOBP	Q13875	183 aa		9.89	□□□□□ -0.83
MBD1-221	ENST00000589867	IGLV9-49	A0A0B4J1Y8	123 aa		9.88	□□□□□ -0.83
MBD1-221	ENST00000589867	SPRR1B	P22528	89 aa		9.88	□□□□□ -0.83
MBD1-221	ENST00000589867	HINT1	P49773	126 aa	Predicted RBP	9.88	□□□□□ -0.83
MBD1-221	ENST00000589867	SPAG11A	Q6PDA7	123 aa		9.88	□□□□□ -0.83
MBD1-221	ENST00000589867	COX8A	P10176	69 aa		9.87	□□□□□ -0.83
MBD1-221	ENST00000589867	DHRS4-AS1	Q9P1J3	65 aa		9.87	□□□□□ -0.83
MBD1-221	ENST00000589867	TRBV7-6	A0A0J9YX20	115 aa		9.86	□□□□□ -0.83
MBD1-221	ENST00000589867		A6NDN8	102 aa		9.86	□□□□□ -0.83
MBD1-221	ENST00000589867		A4D1N5	150 aa		9.85	□□□□□ -0.83
MBD1-221	ENST00000589867	SSBP3-AS1	Q7Z2R9	100 aa		9.85	□□□□□ -0.83
MBD1-221	ENST00000589867	SMIM11B	Q8TCY0	68 aa		9.85	□□□□□ -0.83
MBD1-221	ENST00000589867	TRAV13-2	A0A0B4J235	113 aa		9.84	□□□□□ -0.83
MBD1-221	ENST00000589867	DLEU1	O43261	78 aa		9.84	□□□□□ -0.83
MBD1-221	ENST00000589867	LINC01547	P58512	204 aa	Predicted RBP	9.83	□□□□□ -0.84
MBD1-221	ENST00000589867	MUC17	Q685J3	4493 aa		9.82	□□□□□ -0.84
MBD1-221	ENST00000589867		A0A1B0GWB2	263 aa		9.82	□□□□□ -0.84
MBD1-221	ENST00000589867	C14orf144	Q96I85	54 aa		9.82	□□□□□ -0.84
MBD1-221	ENST00000589867	SPINK1	P00995	79 aa		9.81	□□□□□ -0.84
MBD1-221	ENST00000589867	PAM16	Q9Y3D7	125 aa		9.81	□□□□□ -0.84
MBD1-221	ENST00000589867	SPATA45	Q537H7	98 aa		9.8	□□□□□ -0.84
MBD1-221	ENST00000589867	C4orf48	Q5BLP8	95 aa		9.8	□□□□□ -0.84
MBD1-221	ENST00000589867	IGLV7-46	A0A075B6I9	117 aa		9.79	□□□□□ -0.84
MBD1-221	ENST00000589867	C2orf91	Q6ZV80	131 aa		9.79	□□□□□ -0.84
MBD1-221	ENST00000589867	SMIM29	Q86T20	159 aa		9.79	□□□□□ -0.84
MBD1-221	ENST00000589867	C9orf153	Q5TBE3	101 aa		9.78	□□□□□ -0.84
MBD1-221	ENST00000589867	IGLV5-48	A0A075B6I7	105 aa		9.77	□□□□□ -0.85
MBD1-221	ENST00000589867	TPRXL	Q17RH7	258 aa		9.77	□□□□□ -0.85
MBD1-221	ENST00000589867		Q8N377	158 aa		9.77	□□□□□ -0.85
MBD1-221	ENST00000589867	HIST1H4G	Q99525	98 aa		9.77	□□□□□ -0.85
MBD1-221	ENST00000589867	C12orf57	Q99622	126 aa		9.77	□□□□□ -0.85
MBD1-221	ENST00000589867	MUC2	Q02817	5179 aa		9.76	□□□□□ -0.85
MBD1-221	ENST00000589867	RPS29	P62273	56 aa	Known RBP	9.76	□□□□□ -0.85
MBD1-221	ENST00000589867	VAMP8	Q9BV40	100 aa		9.76	□□□□□ -0.85
MBD1-221	ENST00000589867	PYY3	Q5JQD4	70 aa		9.75	□□□□□ -0.85
MBD1-221	ENST00000589867	DEFB105A	Q8NG35	78 aa		9.75	□□□□□ -0.85
MBD1-221	ENST00000589867	HIGD1B	Q9P298	99 aa		9.75	□□□□□ -0.85
MBD1-221	ENST00000589867	TEX49	A0A1B0GTD5	131 aa		9.74	□□□□□ -0.85
MBD1-221	ENST00000589867	TAL2	Q16559	108 aa		9.74	□□□□□ -0.85
MBD1-221	ENST00000589867		Q1RN00	199 aa		9.73	□□□□□ -0.85
MBD1-221	ENST00000589867	FP248	Q71RG6	208 aa	Predicted RBP	9.73	□□□□□ -0.85
MBD1-221	ENST00000589867	CFC1B	P0CG36	223 aa		9.72	□□□□□ -0.85
MBD1-221	ENST00000589867	CFC1	P0CG37	223 aa		9.72	□□□□□ -0.85
MBD1-221	ENST00000589867	SLC25A34	Q6PIV7	304 aa		9.72	□□□□□ -0.85
MBD1-221	ENST00000589867	LINC00575	Q6W349	94 aa		9.72	□□□□□ -0.85
MBD1-221	ENST00000589867	LAMTOR3	Q9UHA4	124 aa		9.72	□□□□□ -0.85
MBD1-221	ENST00000589867	TMA7	Q9Y2S6	64 aa	Known RBP	9.71	□□□□□ -0.86
MBD1-221	ENST00000589867	KRTAP13-3	Q3SY46	172 aa		9.7	□□□□□ -0.86
MBD1-221	ENST00000589867		A0A0G2JQZ4	141 aa		9.68	□□□□□ -0.86
MBD1-221	ENST00000589867	SLC25A20	O43772	301 aa		9.67	□□□□□ -0.86
MBD1-221	ENST00000589867	NHP2	Q9NX24	153 aa	Known RBP	9.67	□□□□□ -0.86
MBD1-221	ENST00000589867	HRCT1	Q6UXD1	115 aa		9.66	□□□□□ -0.86
MBD1-221	ENST00000589867		A0A0B4J2C4	111 aa		9.65	□□□□□ -0.86
MBD1-221	ENST00000589867	VAMP3	Q15836	100 aa		9.65	□□□□□ -0.86
MBD1-221	ENST00000589867	CDIP1	Q9H305	208 aa		9.65	□□□□□ -0.86
MBD1-221	ENST00000589867	hADV29S1	A0JD25	119 aa		9.64	□□□□□ -0.87
MBD1-221	ENST00000589867	FXYD2	P54710	66 aa		9.64	□□□□□ -0.87
MBD1-221	ENST00000589867		Q6ZQY7	126 aa		9.64	□□□□□ -0.87
MBD1-221	ENST00000589867	CEND1	Q8N111	149 aa		9.64	□□□□□ -0.87
MBD1-221	ENST00000589867	PRO1933	Q9H354	126 aa		9.63	□□□□□ -0.87
MBD1-221	ENST00000589867		H7C2G1	150 aa		9.62	□□□□□ -0.87
MBD1-221	ENST00000589867	CD164	Q04900	197 aa		9.62	□□□□□ -0.87

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