RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
DNMT1-217ENST00000589091 CBY1Q9Y3M2 126 aa8.33□□□□□ -1.08
DNMT1-217ENST00000589091 E9PLD3 99 aa8.32□□□□□ -1.08
DNMT1-217ENST00000589091 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
DNMT1-217ENST00000589091 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
DNMT1-217ENST00000589091 Q9BRP9 147 aa8.32□□□□□ -1.08
DNMT1-217ENST00000589091 TRAV23DV6A0A075B6W5 121 aa8.31□□□□□ -1.08
DNMT1-217ENST00000589091 A0A0J9YXY3 114 aa8.31□□□□□ -1.08
DNMT1-217ENST00000589091 ERC2-IT1O76042 136 aa8.31□□□□□ -1.08
DNMT1-217ENST00000589091 IGLV9-49A0A0B4J1Y8 123 aa8.3□□□□□ -1.08
DNMT1-217ENST00000589091 MOBPQ13875 183 aa8.3□□□□□ -1.08
DNMT1-217ENST00000589091 MUC2Q02817 5179 aa8.3□□□□□ -1.08
DNMT1-217ENST00000589091 SLC7A5P1Q8MH63 180 aa8.29□□□□□ -1.08
DNMT1-217ENST00000589091 ZNF73O43830 326 aaPredicted RBP8.28□□□□□ -1.08
DNMT1-217ENST00000589091 HINT1P49773 126 aaPredicted RBP8.28□□□□□ -1.08
DNMT1-217ENST00000589091 NPC2P61916 151 aa8.28□□□□□ -1.08
DNMT1-217ENST00000589091 SOSTDC1Q6X4U4 206 aa8.28□□□□□ -1.08
DNMT1-217ENST00000589091 C5orf52A6NGY3 159 aa8.27□□□□□ -1.09
DNMT1-217ENST00000589091 SYS1-DBNDD2H3BUS1 97 aa8.27□□□□□ -1.09
DNMT1-217ENST00000589091 KRTAP13-3Q3SY46 172 aa8.27□□□□□ -1.09
DNMT1-217ENST00000589091 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
DNMT1-217ENST00000589091 TIMM17BO60830 172 aa8.26□□□□□ -1.09
DNMT1-217ENST00000589091 SPANXCQ9NY87 97 aa8.26□□□□□ -1.09
DNMT1-217ENST00000589091 MUC17Q685J3 4493 aa8.26□□□□□ -1.09
DNMT1-217ENST00000589091 LINC01545Q5VT33 79 aa8.25□□□□□ -1.09
DNMT1-217ENST00000589091 SLC25A20O43772 301 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST1H2BKO60814 126 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST1H2BJP06899 126 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST1H2BOP23527 126 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST1H2BBP33778 126 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST1H2BDP58876 126 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST1H2BCP62807 126 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST2H2BEQ16778 126 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.24□□□□□ -1.09
DNMT1-217ENST00000589091 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 PET117Q6UWS5 81 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 Q8N377 158 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 LINC00308Q8TCZ7 52 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST1H2BHQ93079 126 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST1H2BNQ99877 126 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 HIST1H2BMQ99879 126 aa8.24□□□□□ -1.09
DNMT1-217ENST00000589091 SLC25A34Q6PIV7 304 aa8.22□□□□□ -1.09
DNMT1-217ENST00000589091 OR13C6PQ8NH95 151 aa8.22□□□□□ -1.09
DNMT1-217ENST00000589091 LITAFQ99732 161 aa8.22□□□□□ -1.09
DNMT1-217ENST00000589091 ZNF815PA8K554 130 aa8.21□□□□□ -1.1
DNMT1-217ENST00000589091 ASB16-AS1Q495Z4 193 aa8.21□□□□□ -1.1
DNMT1-217ENST00000589091 SPANXDQ9BXN6 97 aa8.21□□□□□ -1.1
DNMT1-217ENST00000589091 DHRS4-AS1Q9P1J3 65 aa8.21□□□□□ -1.1
DNMT1-217ENST00000589091 LINC00518Q8N0U6 118 aa8.2□□□□□ -1.1
DNMT1-217ENST00000589091 SPRR1BP22528 89 aa8.19□□□□□ -1.1
DNMT1-217ENST00000589091 SEC61BP60468 96 aaKnown RBP8.19□□□□□ -1.1
DNMT1-217ENST00000589091 ST20-AS1Q8NBB2 130 aa8.19□□□□□ -1.1
DNMT1-217ENST00000589091 C3orf79P0CE67 100 aa8.17□□□□□ -1.1
DNMT1-217ENST00000589091 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
DNMT1-217ENST00000589091 LIMD2Q9BT23 127 aa8.16□□□□□ -1.1
DNMT1-217ENST00000589091 LAMTOR3Q9UHA4 124 aa8.16□□□□□ -1.1
DNMT1-217ENST00000589091 COX7BP24311 80 aa8.15□□□□□ -1.1
DNMT1-217ENST00000589091 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.1
DNMT1-217ENST00000589091 LOC100996750A0A140TA64 210 aa8.14□□□□□ -1.11
DNMT1-217ENST00000589091 C20orf202A1L168 122 aa8.14□□□□□ -1.11
DNMT1-217ENST00000589091 COA6Q5JTJ3 125 aaKnown RBP8.14□□□□□ -1.11
DNMT1-217ENST00000589091 SCGB1D4Q6XE38 83 aa8.14□□□□□ -1.11
DNMT1-217ENST00000589091 KRTAP4-6Q9BYQ5 205 aa8.14□□□□□ -1.11
DNMT1-217ENST00000589091 TTTY13Q9BZ97 58 aa8.14□□□□□ -1.11
DNMT1-217ENST00000589091 KRTDAPP60985 99 aa8.13□□□□□ -1.11
DNMT1-217ENST00000589091 C6orf99Q4VX62 202 aa8.13□□□□□ -1.11
DNMT1-217ENST00000589091 KRTAP9-2Q9BYQ4 174 aa8.13□□□□□ -1.11
DNMT1-217ENST00000589091 FAT4Q6V0I7 4981 aa8.13□□□□□ -1.11
DNMT1-217ENST00000589091 TRBV7-6A0A0J9YX20 115 aa8.12□□□□□ -1.11
DNMT1-217ENST00000589091 IFITM1P13164 125 aa8.12□□□□□ -1.11
DNMT1-217ENST00000589091 AKR1D1P51857 326 aa8.12□□□□□ -1.11
DNMT1-217ENST00000589091 XP32Q5T750 250 aa8.12□□□□□ -1.11
DNMT1-217ENST00000589091 TAL2Q16559 108 aa8.11□□□□□ -1.11
DNMT1-217ENST00000589091 Q6ZVH6 145 aa8.11□□□□□ -1.11
DNMT1-217ENST00000589091 TEX49A0A1B0GTD5 131 aa8.09□□□□□ -1.11
DNMT1-217ENST00000589091 A0A1B0GWB2 263 aa8.09□□□□□ -1.11
DNMT1-217ENST00000589091 CD164Q04900 197 aa8.09□□□□□ -1.11
DNMT1-217ENST00000589091 LINC01547P58512 204 aaPredicted RBP8.08□□□□□ -1.12
DNMT1-217ENST00000589091 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
DNMT1-217ENST00000589091 PRO1933Q9H354 126 aa8.07□□□□□ -1.12
DNMT1-217ENST00000589091 A4D1N5 150 aa8.06□□□□□ -1.12
DNMT1-217ENST00000589091 A6NDN8 102 aa8.06□□□□□ -1.12
DNMT1-217ENST00000589091 Q1RN00 199 aa8.06□□□□□ -1.12
DNMT1-217ENST00000589091 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
DNMT1-217ENST00000589091 KRTAP4-1Q9BYQ7 146 aa8.06□□□□□ -1.12
DNMT1-217ENST00000589091 SNRPEP62304 92 aaKnown RBP8.05□□□□□ -1.12
DNMT1-217ENST00000589091 TRAV13-2A0A0B4J235 113 aa8.04□□□□□ -1.12
DNMT1-217ENST00000589091 H7C2G1 150 aa8.04□□□□□ -1.12
DNMT1-217ENST00000589091 MUSTN1Q8IVN3 82 aa8.04□□□□□ -1.12
DNMT1-217ENST00000589091 NHP2Q9NX24 153 aaKnown RBP8.04□□□□□ -1.12
DNMT1-217ENST00000589091 IGLV5-48A0A075B6I7 105 aa8.03□□□□□ -1.12
DNMT1-217ENST00000589091 ATOH7Q8N100 152 aa8.03□□□□□ -1.12
DNMT1-217ENST00000589091 Q5XG85 94 aa8.02□□□□□ -1.13
DNMT1-217ENST00000589091 PCP2Q8IVA1 136 aa8.02□□□□□ -1.13
DNMT1-217ENST00000589091 SMIM29Q86T20 159 aa8.01□□□□□ -1.13
DNMT1-217ENST00000589091 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
DNMT1-217ENST00000589091 SMIM11BQ8TCY0 68 aa7.98□□□□□ -1.13
DNMT1-217ENST00000589091 VAMP3Q15836 100 aa7.97□□□□□ -1.13
DNMT1-217ENST00000589091 HSBP1L1C9JCN9 74 aa7.96□□□□□ -1.14
DNMT1-217ENST00000589091 F8WEM9 126 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms