RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 LINC00337Q8N6G1 96 aa11.96□□□□□ -0.49
CIRBP-220ENST00000588917 A4D1N5 150 aa11.95□□□□□ -0.5
CIRBP-220ENST00000588917 SPRR1AP35321 89 aa11.95□□□□□ -0.5
CIRBP-220ENST00000588917 HNRNPA3P51991 378 aaKnown RBP11.95□□□□□ -0.5
CIRBP-220ENST00000588917 FAM19A1Q7Z5A9 133 aa11.95□□□□□ -0.5
CIRBP-220ENST00000588917 TRAV23DV6A0A075B6W5 121 aa11.94□□□□□ -0.5
CIRBP-220ENST00000588917 A6NDN8 102 aa11.94□□□□□ -0.5
CIRBP-220ENST00000588917 HINT1P49773 126 aaPredicted RBP11.94□□□□□ -0.5
CIRBP-220ENST00000588917 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
CIRBP-220ENST00000588917 KRTAP29-1A8MX34 341 aaPredicted RBP11.93□□□□□ -0.5
CIRBP-220ENST00000588917 H0Y9J4 135 aa11.93□□□□□ -0.5
CIRBP-220ENST00000588917 CEND1Q8N111 149 aa11.91□□□□□ -0.5
CIRBP-220ENST00000588917 TMEM238LA0A1B0GVL6 79 aa11.9□□□□□ -0.5
CIRBP-220ENST00000588917 A6NJY4 79 aa11.9□□□□□ -0.5
CIRBP-220ENST00000588917 ZNF73O43830 326 aaPredicted RBP11.9□□□□□ -0.5
CIRBP-220ENST00000588917 KRTAP13-1Q8IUC0 172 aa11.89□□□□□ -0.51
CIRBP-220ENST00000588917 KRTAP4-16G5E9R7 235 aaPredicted RBP11.88□□□□□ -0.51
CIRBP-220ENST00000588917 HSD52Q0P140 79 aa11.88□□□□□ -0.51
CIRBP-220ENST00000588917 C12orf57Q99622 126 aa11.88□□□□□ -0.51
CIRBP-220ENST00000588917 PRLHP81277 87 aa11.87□□□□□ -0.51
CIRBP-220ENST00000588917 B5MCH6 92 aa11.86□□□□□ -0.51
CIRBP-220ENST00000588917 OXTP01178 125 aa11.86□□□□□ -0.51
CIRBP-220ENST00000588917 PRO1933Q9H354 126 aa11.86□□□□□ -0.51
CIRBP-220ENST00000588917 TRBV7-6A0A0J9YX20 115 aa11.84□□□□□ -0.51
CIRBP-220ENST00000588917 TSTD3H0UI37 97 aa11.84□□□□□ -0.51
CIRBP-220ENST00000588917 RAB37Q96AX2 223 aa11.84□□□□□ -0.51
CIRBP-220ENST00000588917 HIGD2AQ9BW72 106 aa11.84□□□□□ -0.51
CIRBP-220ENST00000588917 Q6ZRX8 168 aa11.83□□□□□ -0.52
CIRBP-220ENST00000588917 A0A0B4J2C4 111 aa11.82□□□□□ -0.52
CIRBP-220ENST00000588917 CFC1BP0CG36 223 aa11.82□□□□□ -0.52
CIRBP-220ENST00000588917 CFC1P0CG37 223 aa11.82□□□□□ -0.52
CIRBP-220ENST00000588917 C6orf99Q4VX62 202 aa11.82□□□□□ -0.52
CIRBP-220ENST00000588917 PKHD1L1Q86WI1 4243 aa11.82□□□□□ -0.52
CIRBP-220ENST00000588917 VAMP3Q15836 100 aa11.81□□□□□ -0.52
CIRBP-220ENST00000588917 SMIM11BQ8TCY0 68 aa11.8□□□□□ -0.52
CIRBP-220ENST00000588917 COX7BP24311 80 aa11.79□□□□□ -0.52
CIRBP-220ENST00000588917 RPL13AP40429 203 aaKnown RBP11.79□□□□□ -0.52
CIRBP-220ENST00000588917 SMCR5Q8TEV8 140 aa11.79□□□□□ -0.52
CIRBP-220ENST00000588917 LINC01600Q96MT4 127 aa11.79□□□□□ -0.52
CIRBP-220ENST00000588917 A0A1B0GWB2 263 aa11.78□□□□□ -0.52
CIRBP-220ENST00000588917 FXYD2P54710 66 aa11.78□□□□□ -0.52
CIRBP-220ENST00000588917 DHRS4-AS1Q9P1J3 65 aa11.78□□□□□ -0.52
CIRBP-220ENST00000588917 PRO1854Q9UHT4 67 aa11.78□□□□□ -0.52
CIRBP-220ENST00000588917 ZNF706Q9Y5V0 76 aaPredicted RBP11.78□□□□□ -0.52
CIRBP-220ENST00000588917 ELOF1P60002 83 aaKnown RBP11.77□□□□□ -0.53
CIRBP-220ENST00000588917 LRP1Q07954 4544 aaKnown RBP11.76□□□□□ -0.53
CIRBP-220ENST00000588917 Q9BRP9 147 aa11.75□□□□□ -0.53
CIRBP-220ENST00000588917 BVES-AS1Q5T3Y7 98 aa11.74□□□□□ -0.53
CIRBP-220ENST00000588917 M0R143 59 aa11.73□□□□□ -0.53
CIRBP-220ENST00000588917 CTAG1AP78358 180 aa11.73□□□□□ -0.53
CIRBP-220ENST00000588917 NHP2Q9NX24 153 aaKnown RBP11.73□□□□□ -0.53
CIRBP-220ENST00000588917 KRTAP1-4P0C5Y4 121 aa11.72□□□□□ -0.53
CIRBP-220ENST00000588917 H7C2G1 150 aa11.71□□□□□ -0.53
CIRBP-220ENST00000588917 FAM229BQ4G0N7 80 aa11.71□□□□□ -0.53
CIRBP-220ENST00000588917 HMCN2Q8NDA2 5059 aa11.71□□□□□ -0.53
CIRBP-220ENST00000588917 SLC25A20O43772 301 aa11.7□□□□□ -0.54
CIRBP-220ENST00000588917 Q1RN00 199 aa11.7□□□□□ -0.54
CIRBP-220ENST00000588917 SPRR4Q96PI1 79 aa11.7□□□□□ -0.54
CIRBP-220ENST00000588917 CRYGAP11844 174 aa11.69□□□□□ -0.54
CIRBP-220ENST00000588917 ERC2-IT1O76042 136 aa11.68□□□□□ -0.54
CIRBP-220ENST00000588917 H0YGX0 51 aa11.67□□□□□ -0.54
CIRBP-220ENST00000588917 SNCGO76070 127 aa11.67□□□□□ -0.54
CIRBP-220ENST00000588917 KRTAP10-8P60410 259 aa11.67□□□□□ -0.54
CIRBP-220ENST00000588917 FAT3Q8TDW7 4589 aa11.66□□□□□ -0.54
CIRBP-220ENST00000588917 PRR26Q8N8Z3 221 aa11.66□□□□□ -0.54
CIRBP-220ENST00000588917 GAGE2AQ6NT46 116 aa11.64□□□□□ -0.55
CIRBP-220ENST00000588917 LINC00575Q6W349 94 aa11.64□□□□□ -0.55
CIRBP-220ENST00000588917 LINC00483Q53H64 154 aa11.63□□□□□ -0.55
CIRBP-220ENST00000588917 ANAPC11Q9NYG5 84 aa11.63□□□□□ -0.55
CIRBP-220ENST00000588917 UBR4Q5T4S7 5183 aa11.63□□□□□ -0.55
CIRBP-220ENST00000588917 hADV29S1A0JD25 119 aa11.62□□□□□ -0.55
CIRBP-220ENST00000588917 K7ERJ3 54 aa11.62□□□□□ -0.55
CIRBP-220ENST00000588917 COX6CP09669 75 aa11.62□□□□□ -0.55
CIRBP-220ENST00000588917 MT1HL1P0DM35 61 aa11.62□□□□□ -0.55
CIRBP-220ENST00000588917 PSMB2P49721 201 aa11.61□□□□□ -0.55
CIRBP-220ENST00000588917 A0A087X002 238 aa11.6□□□□□ -0.55
CIRBP-220ENST00000588917 TYMSOSQ8TAI1 123 aa11.6□□□□□ -0.55
CIRBP-220ENST00000588917 ST20-AS1Q8NBB2 130 aa11.59□□□□□ -0.55
CIRBP-220ENST00000588917 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.56
CIRBP-220ENST00000588917 SPRR1BP22528 89 aa11.58□□□□□ -0.56
CIRBP-220ENST00000588917 A0A1B0GX51 115 aa11.57□□□□□ -0.56
CIRBP-220ENST00000588917 TSPAN13O95857 204 aa11.57□□□□□ -0.56
CIRBP-220ENST00000588917 TRIAP1O43715 76 aa11.56□□□□□ -0.56
CIRBP-220ENST00000588917 DEFB105AQ8NG35 78 aa11.56□□□□□ -0.56
CIRBP-220ENST00000588917 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.55□□□□□ -0.56
CIRBP-220ENST00000588917 IGLV5-48A0A075B6I7 105 aa11.54□□□□□ -0.56
CIRBP-220ENST00000588917 KRTAP13-2Q52LG2 175 aa11.54□□□□□ -0.56
CIRBP-220ENST00000588917 LAMTOR3Q9UHA4 124 aa11.54□□□□□ -0.56
CIRBP-220ENST00000588917 GHRHP01286 108 aa11.53□□□□□ -0.56
CIRBP-220ENST00000588917 BATFQ16520 125 aa11.53□□□□□ -0.56
CIRBP-220ENST00000588917 OCIAD2Q56VL3 154 aa11.53□□□□□ -0.56
CIRBP-220ENST00000588917 SCGB1C2P0DMR2 95 aa11.52□□□□□ -0.57
CIRBP-220ENST00000588917 Q6ZQY7 126 aa11.52□□□□□ -0.57
CIRBP-220ENST00000588917 SSBP3-AS1Q7Z2R9 100 aa11.51□□□□□ -0.57
CIRBP-220ENST00000588917 C3orf22Q8N5N4 141 aa11.5□□□□□ -0.57
CIRBP-220ENST00000588917 PPDPFLQ8WWR9 84 aa11.5□□□□□ -0.57
CIRBP-220ENST00000588917 IGLV9-49A0A0B4J1Y8 123 aa11.49□□□□□ -0.57
CIRBP-220ENST00000588917 LINC01547P58512 204 aaPredicted RBP11.49□□□□□ -0.57
CIRBP-220ENST00000588917 TNXBP22105 4242 aa11.49□□□□□ -0.57
CIRBP-220ENST00000588917 Q8N377 158 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms