RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 RPL37AP8A6NKH3 93 aa19.52■□□□□ 0.72
CAPNS1-206ENST00000588815 Q6ZSA8 131 aa19.52■□□□□ 0.72
CAPNS1-206ENST00000588815 TCL1BO95988 128 aa19.5■□□□□ 0.71
CAPNS1-206ENST00000588815 ATXN8Q156A1 80 aa19.49■□□□□ 0.71
CAPNS1-206ENST00000588815 PHF5AQ7RTV0 110 aaKnown RBP19.49■□□□□ 0.71
CAPNS1-206ENST00000588815 KRTAP10-1P60331 282 aa19.48■□□□□ 0.71
CAPNS1-206ENST00000588815 SPRR1AP35321 89 aa19.48■□□□□ 0.71
CAPNS1-206ENST00000588815 DNAH5Q8TE73 4624 aa19.47■□□□□ 0.71
CAPNS1-206ENST00000588815 LST1O00453 97 aa19.47■□□□□ 0.71
CAPNS1-206ENST00000588815 UBE2BP63146 152 aa19.47■□□□□ 0.71
CAPNS1-206ENST00000588815 CLEC2BQ92478 149 aa19.46■□□□□ 0.71
CAPNS1-206ENST00000588815 A0A1B0GX51 115 aa19.44■□□□□ 0.7
CAPNS1-206ENST00000588815 UBE2V1Q13404 147 aa19.44■□□□□ 0.7
CAPNS1-206ENST00000588815 REG3GQ6UW15 175 aa19.44■□□□□ 0.7
CAPNS1-206ENST00000588815 COX7BP24311 80 aa19.43■□□□□ 0.7
CAPNS1-206ENST00000588815 ELOF1P60002 83 aaKnown RBP19.43■□□□□ 0.7
CAPNS1-206ENST00000588815 FAM30AQ9NZY2 134 aa19.42■□□□□ 0.7
CAPNS1-206ENST00000588815 SNCGO76070 127 aa19.41■□□□□ 0.7
CAPNS1-206ENST00000588815 TRACP01848 142 aa19.41■□□□□ 0.7
CAPNS1-206ENST00000588815 KRTAP4-16G5E9R7 235 aaPredicted RBP19.4■□□□□ 0.7
CAPNS1-206ENST00000588815 H3BMG7 143 aa19.4■□□□□ 0.7
CAPNS1-206ENST00000588815 FAM218AQ96MZ4 157 aa19.39■□□□□ 0.69
CAPNS1-206ENST00000588815 ETDCA0A1B0GVM5 59 aa19.38■□□□□ 0.69
CAPNS1-206ENST00000588815 LINC00575Q6W349 94 aa19.37■□□□□ 0.69
CAPNS1-206ENST00000588815 CIRBP-AS1Q8TBR5 109 aa19.36■□□□□ 0.69
CAPNS1-206ENST00000588815 SLC25A20O43772 301 aa19.35■□□□□ 0.69
CAPNS1-206ENST00000588815 LINC00528Q8N1L1 170 aa19.35■□□□□ 0.69
CAPNS1-206ENST00000588815 INAFM2P0DMQ5 153 aa19.34■□□□□ 0.69
CAPNS1-206ENST00000588815 SCXQ7RTU7 201 aa19.34■□□□□ 0.69
CAPNS1-206ENST00000588815 B5MCH6 92 aa19.33■□□□□ 0.68
CAPNS1-206ENST00000588815 Q6ZRX8 168 aa19.33■□□□□ 0.68
CAPNS1-206ENST00000588815 DNAH8Q96JB1 4490 aa19.32■□□□□ 0.68
CAPNS1-206ENST00000588815 DNAL4O96015 105 aa19.32■□□□□ 0.68
CAPNS1-206ENST00000588815 KRTAP11-1Q8IUC1 163 aa19.31■□□□□ 0.68
CAPNS1-206ENST00000588815 hADV29S1A0JD25 119 aa19.3■□□□□ 0.68
CAPNS1-206ENST00000588815 DHRS4-AS1Q9P1J3 65 aa19.28■□□□□ 0.68
CAPNS1-206ENST00000588815 H0Y9J4 135 aa19.27■□□□□ 0.67
CAPNS1-206ENST00000588815 C9JAW5 83 aa19.26■□□□□ 0.67
CAPNS1-206ENST00000588815 F8W1H4 67 aa19.26■□□□□ 0.67
CAPNS1-206ENST00000588815 BCE1O60756 84 aa19.25■□□□□ 0.67
CAPNS1-206ENST00000588815 FAM19A1Q7Z5A9 133 aa19.25■□□□□ 0.67
CAPNS1-206ENST00000588815 PRO0461Q9UI25 63 aa19.22■□□□□ 0.67
CAPNS1-206ENST00000588815 PKHD1P08F94 4074 aa19.2■□□□□ 0.66
CAPNS1-206ENST00000588815 H3BT86 120 aa19.2■□□□□ 0.66
CAPNS1-206ENST00000588815 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP19.2■□□□□ 0.66
CAPNS1-206ENST00000588815 PSORS1C2Q9UIG4 136 aa19.2■□□□□ 0.66
CAPNS1-206ENST00000588815 GHRHP01286 108 aa19.18■□□□□ 0.66
CAPNS1-206ENST00000588815 LINC01600Q96MT4 127 aa19.18■□□□□ 0.66
CAPNS1-206ENST00000588815 Q9BRP9 147 aa19.18■□□□□ 0.66
CAPNS1-206ENST00000588815 ORMDL1Q9P0S3 153 aa19.18■□□□□ 0.66
CAPNS1-206ENST00000588815 RYR3Q15413 4870 aa19.18■□□□□ 0.66
CAPNS1-206ENST00000588815 OCIAD2Q56VL3 154 aa19.17■□□□□ 0.66
CAPNS1-206ENST00000588815 H3BQ85 93 aa19.16■□□□□ 0.66
CAPNS1-206ENST00000588815 UBE2AP49459 152 aa19.16■□□□□ 0.66
CAPNS1-206ENST00000588815 PRLHP81277 87 aa19.15■□□□□ 0.66
CAPNS1-206ENST00000588815 Q6ZQY7 126 aa19.14■□□□□ 0.65
CAPNS1-206ENST00000588815 MTURNQ8N3F0 131 aa19.14■□□□□ 0.65
CAPNS1-206ENST00000588815 ANKRD29Q8N6D5 301 aa19.14■□□□□ 0.65
CAPNS1-206ENST00000588815 BAALC-AS2P0C853 105 aa19.12■□□□□ 0.65
CAPNS1-206ENST00000588815 KRTAP13-1Q8IUC0 172 aa19.12■□□□□ 0.65
CAPNS1-206ENST00000588815 C1orf137Q5JT78 98 aa19.11■□□□□ 0.65
CAPNS1-206ENST00000588815 SMCR5Q8TEV8 140 aa19.11■□□□□ 0.65
CAPNS1-206ENST00000588815 SMCPP49901 116 aaPredicted RBP19.1■□□□□ 0.65
CAPNS1-206ENST00000588815 HAMPP81172 84 aa19.09■□□□□ 0.65
CAPNS1-206ENST00000588815 LRP1BQ9NZR2 4599 aa19.09■□□□□ 0.65
CAPNS1-206ENST00000588815 TMEM256-PLSCR3K7ERE1 68 aa19.09■□□□□ 0.65
CAPNS1-206ENST00000588815 XGP55808 180 aa19.08■□□□□ 0.64
CAPNS1-206ENST00000588815 HIGD2AQ9BW72 106 aa19.07■□□□□ 0.64
CAPNS1-206ENST00000588815 PPDPFLQ8WWR9 84 aa19.04■□□□□ 0.64
CAPNS1-206ENST00000588815 DYNC1H1Q14204 4646 aaKnown RBP19.04■□□□□ 0.64
CAPNS1-206ENST00000588815 ZNF861PO60384 105 aa19.03■□□□□ 0.64
CAPNS1-206ENST00000588815 ERC2-IT1O76042 136 aa19.02■□□□□ 0.63
CAPNS1-206ENST00000588815 IGLV7-43P04211 117 aa19.02■□□□□ 0.63
CAPNS1-206ENST00000588815 IGLV5-48A0A075B6I7 105 aa18.99■□□□□ 0.63
CAPNS1-206ENST00000588815 TEN1Q86WV5 123 aa18.97■□□□□ 0.63
CAPNS1-206ENST00000588815 ETDBQ3ZM63 59 aa18.95■□□□□ 0.62
CAPNS1-206ENST00000588815 LINC01547P58512 204 aaPredicted RBP18.94■□□□□ 0.62
CAPNS1-206ENST00000588815 ST20-AS1Q8NBB2 130 aa18.92■□□□□ 0.62
CAPNS1-206ENST00000588815 TEX49A0A1B0GTD5 131 aa18.91■□□□□ 0.62
CAPNS1-206ENST00000588815 CDK2AP2O75956 126 aa18.91■□□□□ 0.62
CAPNS1-206ENST00000588815 Q8N377 158 aa18.9■□□□□ 0.62
CAPNS1-206ENST00000588815 DEFB105AQ8NG35 78 aa18.9■□□□□ 0.62
CAPNS1-206ENST00000588815 ZNF706Q9Y5V0 76 aaPredicted RBP18.9■□□□□ 0.62
CAPNS1-206ENST00000588815 JMJD7-PLA2G4BH0Y9G9 81 aa18.87■□□□□ 0.61
CAPNS1-206ENST00000588815 RPL37AP61513 92 aaKnown RBP18.87■□□□□ 0.61
CAPNS1-206ENST00000588815 SPRR1BP22528 89 aa18.86■□□□□ 0.61
CAPNS1-206ENST00000588815 LAMTOR3Q9UHA4 124 aa18.85■□□□□ 0.61
CAPNS1-206ENST00000588815 APOBP04114 4563 aaKnown RBP18.84■□□□□ 0.61
CAPNS1-206ENST00000588815 NDUFV3P56181 108 aaKnown RBP18.84■□□□□ 0.61
CAPNS1-206ENST00000588815 OBSCN-AS1Q96MR7 158 aa18.84■□□□□ 0.61
CAPNS1-206ENST00000588815 SPRR4Q96PI1 79 aa18.81■□□□□ 0.6
CAPNS1-206ENST00000588815 SMR3BP02814 79 aaPredicted RBP18.8■□□□□ 0.6
CAPNS1-206ENST00000588815 GAGE2AQ6NT46 116 aa18.78■□□□□ 0.6
CAPNS1-206ENST00000588815 RBM3P98179 157 aaKnown RBP18.76■□□□□ 0.59
CAPNS1-206ENST00000588815 LINC00483Q53H64 154 aa18.76■□□□□ 0.59
CAPNS1-206ENST00000588815 SMIM29Q86T20 159 aa18.74■□□□□ 0.59
CAPNS1-206ENST00000588815 SRRM2Q9UQ35 2752 aaKnown RBP18.71■□□□□ 0.59
CAPNS1-206ENST00000588815 VPS13BQ7Z7G8 4022 aa18.71■□□□□ 0.59
CAPNS1-206ENST00000588815 F8WEM9 126 aa18.7■□□□□ 0.58
CAPNS1-206ENST00000588815 SPINK6Q6UWN8 80 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms