RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 RELNP78509 3460 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 APC2O95996 2303 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 IGKV3-20P01619 116 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 IGHV3-11P01762 117 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 P0C880 135 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 MINOS1Q5TGZ0 78 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 C8orf17Q9NRJ1 99 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 CR1P17927 2039 aa3.53□□□□□ -1.85
LINC01538-201ENST00000588074 IGLV1-50A0A075B6I6 118 aa3.52□□□□□ -1.85
LINC01538-201ENST00000588074 A0A087WSZ3 146 aa3.52□□□□□ -1.85
LINC01538-201ENST00000588074 INSP01308 110 aa3.52□□□□□ -1.85
LINC01538-201ENST00000588074 PRR34Q9NV39 138 aa3.52□□□□□ -1.85
LINC01538-201ENST00000588074 URB1O60287 2271 aaKnown RBP3.52□□□□□ -1.85
LINC01538-201ENST00000588074 K7EQZ3 153 aa3.51□□□□□ -1.85
LINC01538-201ENST00000588074 LINC00483Q53H64 154 aa3.51□□□□□ -1.85
LINC01538-201ENST00000588074 ABCA1O95477 2261 aa3.51□□□□□ -1.85
LINC01538-201ENST00000588074 IGLV5-48A0A075B6I7 105 aa3.51□□□□□ -1.85
LINC01538-201ENST00000588074 TLX1NBP0CAT3 122 aa3.51□□□□□ -1.85
LINC01538-201ENST00000588074 DEFB1P60022 68 aa3.51□□□□□ -1.85
LINC01538-201ENST00000588074 TYMSOSQ8TAI1 123 aa3.51□□□□□ -1.85
LINC01538-201ENST00000588074 BSNQ9UPA5 3926 aa3.51□□□□□ -1.85
LINC01538-201ENST00000588074 TPRP12270 2363 aaKnown RBP3.51□□□□□ -1.85
LINC01538-201ENST00000588074 SORL1Q92673 2214 aa3.5□□□□□ -1.85
LINC01538-201ENST00000588074 ACACAQ13085 2346 aa3.5□□□□□ -1.85
LINC01538-201ENST00000588074 DSPP15924 2871 aaKnown RBP3.5□□□□□ -1.85
LINC01538-201ENST00000588074 UQCR11O14957 56 aa3.5□□□□□ -1.85
LINC01538-201ENST00000588074 ZNF861PO60384 105 aa3.5□□□□□ -1.85
LINC01538-201ENST00000588074 CACNA1AO00555 2505 aa3.5□□□□□ -1.85
LINC01538-201ENST00000588074 DEFB131BA0A096LNP1 70 aa3.5□□□□□ -1.85
LINC01538-201ENST00000588074 C16orf74Q96GX8 76 aa3.5□□□□□ -1.85
LINC01538-201ENST00000588074 CACNA1GO43497 2377 aa3.49□□□□□ -1.85
LINC01538-201ENST00000588074 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
LINC01538-201ENST00000588074 ACACBO00763 2458 aa3.49□□□□□ -1.85
LINC01538-201ENST00000588074 KRTAP29-1A8MX34 341 aaPredicted RBP3.49□□□□□ -1.85
LINC01538-201ENST00000588074 C1orf137Q5JT78 98 aa3.49□□□□□ -1.85
LINC01538-201ENST00000588074 CAMK2N2Q96S95 79 aa3.49□□□□□ -1.85
LINC01538-201ENST00000588074 NBEAQ8NFP9 2946 aa3.48□□□□□ -1.85
LINC01538-201ENST00000588074 ANKRD11Q6UB99 2663 aaPredicted RBP3.48□□□□□ -1.85
LINC01538-201ENST00000588074 A0A1B0GVX0 72 aa3.48□□□□□ -1.85
LINC01538-201ENST00000588074 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
LINC01538-201ENST00000588074 MED13LQ71F56 2210 aa3.48□□□□□ -1.85
LINC01538-201ENST00000588074 PIEZO2Q9H5I5 2752 aa3.48□□□□□ -1.85
LINC01538-201ENST00000588074 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
LINC01538-201ENST00000588074 A8MTW9 85 aa3.48□□□□□ -1.85
LINC01538-201ENST00000588074 HRES1P13985 223 aa3.48□□□□□ -1.85
LINC01538-201ENST00000588074 MAP1BP46821 2468 aaKnown RBP3.48□□□□□ -1.85
LINC01538-201ENST00000588074 C20orf166-AS1Q96NR2 134 aa3.47□□□□□ -1.85
LINC01538-201ENST00000588074 IGKV2D-30A0A075B6S6 120 aa3.46□□□□□ -1.85
LINC01538-201ENST00000588074 A8MWP4 228 aa3.46□□□□□ -1.85
LINC01538-201ENST00000588074 K7ERS5 55 aa3.46□□□□□ -1.85
LINC01538-201ENST00000588074 CACNA1BQ00975 2339 aa3.46□□□□□ -1.86
LINC01538-201ENST00000588074 EPG5Q9HCE0 2579 aa3.46□□□□□ -1.86
LINC01538-201ENST00000588074 ATRXP46100 2492 aa3.46□□□□□ -1.86
LINC01538-201ENST00000588074 PKD1L2Q7Z442 2459 aa3.46□□□□□ -1.86
LINC01538-201ENST00000588074 IGLV10-54A0A075B6I4 117 aa3.46□□□□□ -1.86
LINC01538-201ENST00000588074 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
LINC01538-201ENST00000588074 DMAC1Q96GE9 116 aa3.46□□□□□ -1.86
LINC01538-201ENST00000588074 SPINK13Q1W4C9 94 aa3.45□□□□□ -1.86
LINC01538-201ENST00000588074 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
LINC01538-201ENST00000588074 C15orf56Q8N910 161 aa3.45□□□□□ -1.86
LINC01538-201ENST00000588074 CIRBP-AS1Q8TBR5 109 aa3.45□□□□□ -1.86
LINC01538-201ENST00000588074 RHPN1-AS1Q9BWJ2 59 aa3.45□□□□□ -1.86
LINC01538-201ENST00000588074 ITPR1Q14643 2758 aa3.45□□□□□ -1.86
LINC01538-201ENST00000588074 USP24Q9UPU5 2620 aa3.45□□□□□ -1.86
LINC01538-201ENST00000588074 WFDC13Q8IUB5 93 aa3.45□□□□□ -1.86
LINC01538-201ENST00000588074 ZFYVE26Q68DK2 2539 aa3.45□□□□□ -1.86
LINC01538-201ENST00000588074 IGKV3-7A0A075B6H7 116 aa3.44□□□□□ -1.86
LINC01538-201ENST00000588074 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
LINC01538-201ENST00000588074 COL12A1Q99715 3063 aa3.44□□□□□ -1.86
LINC01538-201ENST00000588074 KALRNO60229 2985 aa3.44□□□□□ -1.86
LINC01538-201ENST00000588074 A0A1B0GU69 56 aa3.44□□□□□ -1.86
LINC01538-201ENST00000588074 DEFB113Q30KQ7 82 aa3.44□□□□□ -1.86
LINC01538-201ENST00000588074 MINOS1-NBL1R4GNA1 71 aa3.43□□□□□ -1.86
LINC01538-201ENST00000588074 PRRC2CQ9Y520 2896 aaKnown RBP3.43□□□□□ -1.86
LINC01538-201ENST00000588074 A6NDX4 124 aa3.43□□□□□ -1.86
LINC01538-201ENST00000588074 CYSRT1A8MQ03 144 aa3.43□□□□□ -1.86
LINC01538-201ENST00000588074 WFDC10BQ8IUB3 73 aa3.43□□□□□ -1.86
LINC01538-201ENST00000588074 SPTA1P02549 2419 aa3.43□□□□□ -1.86
LINC01538-201ENST00000588074 FAM168BA1KXE4 195 aa3.42□□□□□ -1.86
LINC01538-201ENST00000588074 NUPR2A6NF83 97 aa3.42□□□□□ -1.86
LINC01538-201ENST00000588074 A8MUU9 505 aa3.42□□□□□ -1.86
LINC01538-201ENST00000588074 H3BUA1 57 aa3.42□□□□□ -1.86
LINC01538-201ENST00000588074 C14orf177Q52M58 125 aa3.42□□□□□ -1.86
LINC01538-201ENST00000588074 USMG5Q96IX5 58 aa3.42□□□□□ -1.86
LINC01538-201ENST00000588074 TP53AIP1Q9HCN2 124 aa3.42□□□□□ -1.86
LINC01538-201ENST00000588074 KRTAP26-1Q6PEX3 210 aa3.42□□□□□ -1.86
LINC01538-201ENST00000588074 DOPEY2Q9Y3R5 2298 aa3.42□□□□□ -1.86
LINC01538-201ENST00000588074 DNAH10OSP0CZ25 163 aa3.41□□□□□ -1.86
LINC01538-201ENST00000588074 COL6A6A6NMZ7 2263 aa3.41□□□□□ -1.86
LINC01538-201ENST00000588074 TLN1Q9Y490 2541 aaKnown RBP3.41□□□□□ -1.86
LINC01538-201ENST00000588074 IGKV3OR2-268A0A0C4DH90 116 aa3.41□□□□□ -1.86
LINC01538-201ENST00000588074 A0A0J9YWU9 116 aa3.41□□□□□ -1.86
LINC01538-201ENST00000588074 DEFB116Q30KQ4 102 aa3.4□□□□□ -1.86
LINC01538-201ENST00000588074 NBASA2RRP1 2371 aa3.4□□□□□ -1.86
LINC01538-201ENST00000588074 IGSF10Q6WRI0 2623 aa3.4□□□□□ -1.87
LINC01538-201ENST00000588074 GVQW2A0A096LPI5 108 aaPredicted RBP3.4□□□□□ -1.87
LINC01538-201ENST00000588074 TRGV1A0A0A0MS02 117 aa3.4□□□□□ -1.87
LINC01538-201ENST00000588074 G3V318 75 aa3.4□□□□□ -1.87
LINC01538-201ENST00000588074 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
LINC01538-201ENST00000588074 PCOTHQ58A44 107 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms