RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ADAMTSL4-AS1Q5T5F5 129 aa8.07□□□□□ -1.12
VMP1-206ENST00000587945 KRTAP9-2Q9BYQ4 174 aa8.07□□□□□ -1.12
VMP1-206ENST00000587945 NDUFC2O95298 119 aa8.06□□□□□ -1.12
VMP1-206ENST00000587945 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
VMP1-206ENST00000587945 A0A0J9YXY3 114 aa8.05□□□□□ -1.12
VMP1-206ENST00000587945 SSBP3-AS1Q7Z2R9 100 aa8.05□□□□□ -1.12
VMP1-206ENST00000587945 Q8N377 158 aa8.04□□□□□ -1.12
VMP1-206ENST00000587945 ST20-AS1Q8NBB2 130 aa8.04□□□□□ -1.12
VMP1-206ENST00000587945 TMA7Q9Y2S6 64 aaKnown RBP8.04□□□□□ -1.12
VMP1-206ENST00000587945 E9PLD3 99 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 ZNF73O43830 326 aaPredicted RBP8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST1H2BKO60814 126 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST1H2BJP06899 126 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST1H2BOP23527 126 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST1H2BBP33778 126 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST1H2BDP58876 126 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST1H2BCP62807 126 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST2H2BEQ16778 126 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST1H2BHQ93079 126 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST1H2BNQ99877 126 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 HIST1H2BMQ99879 126 aa8.03□□□□□ -1.12
VMP1-206ENST00000587945 JOSD1Q15040 202 aaPredicted RBP8.01□□□□□ -1.13
VMP1-206ENST00000587945 ASB16-AS1Q495Z4 193 aa8.01□□□□□ -1.13
VMP1-206ENST00000587945 C9orf153Q5TBE3 101 aa8.01□□□□□ -1.13
VMP1-206ENST00000587945 RPS29P62273 56 aaKnown RBP8□□□□□ -1.13
VMP1-206ENST00000587945 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
VMP1-206ENST00000587945 SYS1-DBNDD2H3BUS1 97 aa7.99□□□□□ -1.13
VMP1-206ENST00000587945 SLC25A20O43772 301 aa7.99□□□□□ -1.13
VMP1-206ENST00000587945 LITAFQ99732 161 aa7.99□□□□□ -1.13
VMP1-206ENST00000587945 OR13C6PQ8NH95 151 aa7.98□□□□□ -1.13
VMP1-206ENST00000587945 LINC00308Q8TCZ7 52 aa7.98□□□□□ -1.13
VMP1-206ENST00000587945 HINT1P49773 126 aaPredicted RBP7.96□□□□□ -1.14
VMP1-206ENST00000587945 TTTY13Q9BZ97 58 aa7.96□□□□□ -1.14
VMP1-206ENST00000587945 SPANXCQ9NY87 97 aa7.96□□□□□ -1.14
VMP1-206ENST00000587945 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
VMP1-206ENST00000587945 COA6Q5JTJ3 125 aaKnown RBP7.95□□□□□ -1.14
VMP1-206ENST00000587945 LINC01545Q5VT33 79 aa7.95□□□□□ -1.14
VMP1-206ENST00000587945 ZNF815PA8K554 130 aa7.94□□□□□ -1.14
VMP1-206ENST00000587945 TIMM17BO60830 172 aa7.94□□□□□ -1.14
VMP1-206ENST00000587945 CBY1Q9Y3M2 126 aa7.94□□□□□ -1.14
VMP1-206ENST00000587945 C5orf52A6NGY3 159 aa7.93□□□□□ -1.14
VMP1-206ENST00000587945 S100A6P06703 90 aa7.93□□□□□ -1.14
VMP1-206ENST00000587945 SNRPEP62304 92 aaKnown RBP7.93□□□□□ -1.14
VMP1-206ENST00000587945 HRCT1Q6UXD1 115 aa7.93□□□□□ -1.14
VMP1-206ENST00000587945 SPRR1BP22528 89 aa7.92□□□□□ -1.14
VMP1-206ENST00000587945 XP32Q5T750 250 aa7.92□□□□□ -1.14
VMP1-206ENST00000587945 PET117Q6UWS5 81 aa7.92□□□□□ -1.14
VMP1-206ENST00000587945 SPANXDQ9BXN6 97 aa7.91□□□□□ -1.14
VMP1-206ENST00000587945 DHRS4-AS1Q9P1J3 65 aa7.91□□□□□ -1.14
VMP1-206ENST00000587945 C3orf79P0CE67 100 aa7.9□□□□□ -1.14
VMP1-206ENST00000587945 LINC01547P58512 204 aaPredicted RBP7.9□□□□□ -1.14
VMP1-206ENST00000587945 C6orf99Q4VX62 202 aa7.9□□□□□ -1.14
VMP1-206ENST00000587945 HIST3H2BBQ8N257 126 aa7.9□□□□□ -1.14
VMP1-206ENST00000587945 COX7BP24311 80 aa7.89□□□□□ -1.15
VMP1-206ENST00000587945 ELOF1P60002 83 aaKnown RBP7.89□□□□□ -1.15
VMP1-206ENST00000587945 SLC25A34Q6PIV7 304 aa7.88□□□□□ -1.15
VMP1-206ENST00000587945 DEFB105AQ8NG35 78 aa7.88□□□□□ -1.15
VMP1-206ENST00000587945 LAMTOR3Q9UHA4 124 aa7.88□□□□□ -1.15
VMP1-206ENST00000587945 KRTDAPP60985 99 aa7.87□□□□□ -1.15
VMP1-206ENST00000587945 Q1RN00 199 aa7.87□□□□□ -1.15
VMP1-206ENST00000587945 LINC00518Q8N0U6 118 aa7.87□□□□□ -1.15
VMP1-206ENST00000587945 TAL2Q16559 108 aa7.86□□□□□ -1.15
VMP1-206ENST00000587945 LIMD2Q9BT23 127 aa7.86□□□□□ -1.15
VMP1-206ENST00000587945 C9orf92A6NGG3 77 aa7.85□□□□□ -1.15
VMP1-206ENST00000587945 ANKRD39Q53RE8 183 aa7.85□□□□□ -1.15
VMP1-206ENST00000587945 SCGB1D4Q6XE38 83 aa7.85□□□□□ -1.15
VMP1-206ENST00000587945 HIST1H2BLQ99880 126 aa7.85□□□□□ -1.15
VMP1-206ENST00000587945 KRTAP9-6A0A140TA67 174 aa7.84□□□□□ -1.15
VMP1-206ENST00000587945 S100A2P29034 98 aa7.84□□□□□ -1.15
VMP1-206ENST00000587945 LOC105371267A0A1B0GV96 52 aa7.83□□□□□ -1.16
VMP1-206ENST00000587945 H7C2G1 150 aa7.83□□□□□ -1.16
VMP1-206ENST00000587945 ATOH7Q8N100 152 aa7.83□□□□□ -1.16
VMP1-206ENST00000587945 TEX49A0A1B0GTD5 131 aa7.82□□□□□ -1.16
VMP1-206ENST00000587945 A6NDN8 102 aa7.82□□□□□ -1.16
VMP1-206ENST00000587945 SMIM29Q86T20 159 aa7.82□□□□□ -1.16
VMP1-206ENST00000587945 A0A0G2JQZ4 141 aa7.81□□□□□ -1.16
VMP1-206ENST00000587945 PCOTHQ58A44 107 aa7.81□□□□□ -1.16
VMP1-206ENST00000587945 PRO1933Q9H354 126 aa7.81□□□□□ -1.16
VMP1-206ENST00000587945 TRBV7-6A0A0J9YX20 115 aa7.8□□□□□ -1.16
VMP1-206ENST00000587945 LCE2CQ5TA81 110 aa7.8□□□□□ -1.16
VMP1-206ENST00000587945 PCP2Q8IVA1 136 aa7.8□□□□□ -1.16
VMP1-206ENST00000587945 MUSTN1Q8IVN3 82 aa7.8□□□□□ -1.16
VMP1-206ENST00000587945 A0A1B0GWB2 263 aa7.79□□□□□ -1.16
VMP1-206ENST00000587945 C20orf202A1L168 122 aa7.79□□□□□ -1.16
VMP1-206ENST00000587945 IFITM1P13164 125 aa7.79□□□□□ -1.16
VMP1-206ENST00000587945 CD164Q04900 197 aa7.79□□□□□ -1.16
VMP1-206ENST00000587945 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
VMP1-206ENST00000587945 IGLV8-61A0A075B6I0 122 aa7.77□□□□□ -1.17
VMP1-206ENST00000587945 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
VMP1-206ENST00000587945 AKR1D1P51857 326 aa7.77□□□□□ -1.17
VMP1-206ENST00000587945 KRTAP19-2Q3LHN2 52 aa7.77□□□□□ -1.17
VMP1-206ENST00000587945 Q6ZVH6 145 aa7.76□□□□□ -1.17
VMP1-206ENST00000587945 C1orf195Q5TG92 126 aa7.75□□□□□ -1.17
VMP1-206ENST00000587945 SMIM11BQ8TCY0 68 aa7.75□□□□□ -1.17
VMP1-206ENST00000587945 Q5XG85 94 aa7.74□□□□□ -1.17
VMP1-206ENST00000587945 TRAV13-2A0A0B4J235 113 aa7.73□□□□□ -1.17
VMP1-206ENST00000587945 A4D1N5 150 aa7.72□□□□□ -1.17
VMP1-206ENST00000587945 PYY3Q5JQD4 70 aa7.71□□□□□ -1.18
VMP1-206ENST00000587945 MT1HP80294 61 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms