RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 C5orf47Q569G3 176 aa12.25□□□□□ -0.45
DDX39A-206ENST00000587730 NKAPP1Q8N9T2 125 aa12.25□□□□□ -0.45
DDX39A-206ENST00000587730 TRRAPQ9Y4A5 3859 aa12.25□□□□□ -0.45
DDX39A-206ENST00000587730 PLA2G2DQ9UNK4 145 aa12.24□□□□□ -0.45
DDX39A-206ENST00000587730 ERC2-IT1O76042 136 aa12.23□□□□□ -0.45
DDX39A-206ENST00000587730 Q6ZTC4 211 aa12.23□□□□□ -0.45
DDX39A-206ENST00000587730 TLX1NBP0CAT3 122 aa12.23□□□□□ -0.45
DDX39A-206ENST00000587730 ESRGQ1W209 222 aa12.23□□□□□ -0.45
DDX39A-206ENST00000587730 H7BZZ5 65 aa12.22□□□□□ -0.45
DDX39A-206ENST00000587730 Q6ZRP5 223 aa12.22□□□□□ -0.45
DDX39A-206ENST00000587730 DHRS4-AS1Q9P1J3 65 aa12.22□□□□□ -0.45
DDX39A-206ENST00000587730 ANK2Q01484 3957 aa12.22□□□□□ -0.45
DDX39A-206ENST00000587730 TRAV10A0A0B4J240 114 aa12.21□□□□□ -0.45
DDX39A-206ENST00000587730 SERP1Q9Y6X1 66 aa12.21□□□□□ -0.45
DDX39A-206ENST00000587730 IGKV2D-24A0A075B6R9 120 aa12.21□□□□□ -0.46
DDX39A-206ENST00000587730 ATP5EP56381 51 aaPredicted RBP12.21□□□□□ -0.46
DDX39A-206ENST00000587730 NREPQ16612 68 aa12.19□□□□□ -0.46
DDX39A-206ENST00000587730 DNAH10OSP0CZ25 163 aa12.18□□□□□ -0.46
DDX39A-206ENST00000587730 IGLV5-48A0A075B6I7 105 aa12.17□□□□□ -0.46
DDX39A-206ENST00000587730 IGLV5-37A0A075B6J1 123 aa12.17□□□□□ -0.46
DDX39A-206ENST00000587730 DEFB131BA0A096LNP1 70 aa12.17□□□□□ -0.46
DDX39A-206ENST00000587730 NBEAL1Q6ZS30 2694 aa12.17□□□□□ -0.46
DDX39A-206ENST00000587730 VWFP04275 2813 aa12.16□□□□□ -0.46
DDX39A-206ENST00000587730 EPM2AB3EWF7 344 aa12.16□□□□□ -0.46
DDX39A-206ENST00000587730 PRYO14603 147 aa12.16□□□□□ -0.46
DDX39A-206ENST00000587730 RETNQ9HD89 108 aa12.16□□□□□ -0.46
DDX39A-206ENST00000587730 BPY2O14599 106 aa12.15□□□□□ -0.46
DDX39A-206ENST00000587730 C7orf33Q8WU49 177 aa12.15□□□□□ -0.46
DDX39A-206ENST00000587730 OXTP01178 125 aa12.14□□□□□ -0.47
DDX39A-206ENST00000587730 FUSP35637 526 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDX39A-206ENST00000587730 C11orf45Q8TAV5 145 aa12.14□□□□□ -0.47
DDX39A-206ENST00000587730 SCXQ7RTU7 201 aa12.13□□□□□ -0.47
DDX39A-206ENST00000587730 RMI2Q96E14 147 aa12.13□□□□□ -0.47
DDX39A-206ENST00000587730 CMYA5Q8N3K9 4069 aa12.12□□□□□ -0.47
DDX39A-206ENST00000587730 Q6ZRX8 168 aa12.12□□□□□ -0.47
DDX39A-206ENST00000587730 MRAPQ8TCY5 172 aa12.12□□□□□ -0.47
DDX39A-206ENST00000587730 KRTAP10-11P60412 298 aa12.11□□□□□ -0.47
DDX39A-206ENST00000587730 IGKV4-1P06312 121 aa12.11□□□□□ -0.47
DDX39A-206ENST00000587730 Q8N377 158 aa12.11□□□□□ -0.47
DDX39A-206ENST00000587730 TM2D3Q9BRN9 247 aa12.11□□□□□ -0.47
DDX39A-206ENST00000587730 SERTAD4-AS1Q5TG53 156 aa12.09□□□□□ -0.47
DDX39A-206ENST00000587730 ETDCA0A1B0GVM5 59 aa12.09□□□□□ -0.47
DDX39A-206ENST00000587730 SPRR1AP35321 89 aa12.09□□□□□ -0.47
DDX39A-206ENST00000587730 F8WEM9 126 aa12.08□□□□□ -0.48
DDX39A-206ENST00000587730 TMEM254Q8TBM7 123 aa12.08□□□□□ -0.48
DDX39A-206ENST00000587730 SNURFQ9Y675 71 aa12.08□□□□□ -0.48
DDX39A-206ENST00000587730 IGLV1-50A0A075B6I6 118 aa12.07□□□□□ -0.48
DDX39A-206ENST00000587730 Q5XG85 94 aa12.07□□□□□ -0.48
DDX39A-206ENST00000587730 KRTAP4-16G5E9R7 235 aaPredicted RBP12.06□□□□□ -0.48
DDX39A-206ENST00000587730 PKD1L1Q8TDX9 2849 aa12.05□□□□□ -0.48
DDX39A-206ENST00000587730 DEFB105AQ8NG35 78 aa12.05□□□□□ -0.48
DDX39A-206ENST00000587730 OCR1Q9BZK8 76 aa12.04□□□□□ -0.48
DDX39A-206ENST00000587730 SMIM26A0A096LP01 95 aa12.03□□□□□ -0.48
DDX39A-206ENST00000587730 TNP2Q05952 138 aa12.02□□□□□ -0.48
DDX39A-206ENST00000587730 C3orf84H3BNL1 204 aa12.02□□□□□ -0.49
DDX39A-206ENST00000587730 Q8NBF4 154 aa12.02□□□□□ -0.49
DDX39A-206ENST00000587730 C1orf137Q5JT78 98 aa12.01□□□□□ -0.49
DDX39A-206ENST00000587730 SPRR4Q96PI1 79 aa12□□□□□ -0.49
DDX39A-206ENST00000587730 Q9BRP9 147 aa12□□□□□ -0.49
DDX39A-206ENST00000587730 MRPL55Q7Z7F7 128 aaKnown RBP11.99□□□□□ -0.49
DDX39A-206ENST00000587730 A0A0U1RQV1 116 aa11.98□□□□□ -0.49
DDX39A-206ENST00000587730 C4orf26Q17RF5 130 aa11.98□□□□□ -0.49
DDX39A-206ENST00000587730 Q8N9L7 120 aa11.97□□□□□ -0.49
DDX39A-206ENST00000587730 A0A1W2PNM2 257 aa11.97□□□□□ -0.49
DDX39A-206ENST00000587730 RPL37AP8A6NKH3 93 aa11.97□□□□□ -0.49
DDX39A-206ENST00000587730 LINC00588Q9Y4M8 146 aa11.97□□□□□ -0.49
DDX39A-206ENST00000587730 HRCT1Q6UXD1 115 aa11.94□□□□□ -0.5
DDX39A-206ENST00000587730 REG3GQ6UW15 175 aa11.93□□□□□ -0.5
DDX39A-206ENST00000587730 UBE2BP63146 152 aa11.92□□□□□ -0.5
DDX39A-206ENST00000587730 LCE6AA0A183 80 aa11.91□□□□□ -0.5
DDX39A-206ENST00000587730 FAM168BA1KXE4 195 aa11.91□□□□□ -0.5
DDX39A-206ENST00000587730 MGAM2Q2M2H8 2515 aa11.89□□□□□ -0.51
DDX39A-206ENST00000587730 ST20-AS1Q8NBB2 130 aa11.89□□□□□ -0.51
DDX39A-206ENST00000587730 KRTAP7-1Q8IUC3 87 aa11.88□□□□□ -0.51
DDX39A-206ENST00000587730 SMIM29Q86T20 159 aa11.87□□□□□ -0.51
DDX39A-206ENST00000587730 DNAH3Q8TD57 4116 aa11.86□□□□□ -0.51
DDX39A-206ENST00000587730 CASC10Q5T4H9 136 aa11.86□□□□□ -0.51
DDX39A-206ENST00000587730 NOTCH1P46531 2555 aa11.85□□□□□ -0.51
DDX39A-206ENST00000587730 IGLV8-61A0A075B6I0 122 aa11.83□□□□□ -0.51
DDX39A-206ENST00000587730 DSCR10P59022 87 aa11.83□□□□□ -0.51
DDX39A-206ENST00000587730 FP248Q71RG6 208 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-206ENST00000587730 C16orf90A8MZG2 172 aa11.82□□□□□ -0.52
DDX39A-206ENST00000587730 CNBPP62633 177 aaKnown RBP11.82□□□□□ -0.52
DDX39A-206ENST00000587730 LINC00476Q8WZB0 136 aa11.82□□□□□ -0.52
DDX39A-206ENST00000587730 HIGD2AQ9BW72 106 aa11.81□□□□□ -0.52
DDX39A-206ENST00000587730 FAM30AQ9NZY2 134 aa11.8□□□□□ -0.52
DDX39A-206ENST00000587730 PKIGQ9Y2B9 76 aa11.8□□□□□ -0.52
DDX39A-206ENST00000587730 HCG22E2RYF7 251 aa11.79□□□□□ -0.52
DDX39A-206ENST00000587730 MEGF8Q7Z7M0 2845 aa11.78□□□□□ -0.52
DDX39A-206ENST00000587730 C14orf177Q52M58 125 aa11.78□□□□□ -0.52
DDX39A-206ENST00000587730 PRO0628Q9UI54 55 aa11.77□□□□□ -0.52
DDX39A-206ENST00000587730 K7EQZ3 153 aa11.76□□□□□ -0.53
DDX39A-206ENST00000587730 IGFL1Q6UW32 110 aa11.76□□□□□ -0.53
DDX39A-206ENST00000587730 ZCCHC13Q8WW36 166 aaKnown RBP11.75□□□□□ -0.53
DDX39A-206ENST00000587730 H0Y9J4 135 aa11.74□□□□□ -0.53
DDX39A-206ENST00000587730 PSCAO43653 123 aa11.74□□□□□ -0.53
DDX39A-206ENST00000587730 NDUFB1O75438 58 aa11.74□□□□□ -0.53
DDX39A-206ENST00000587730 SEC61GP60059 68 aa11.74□□□□□ -0.53
DDX39A-206ENST00000587730 A0A096LNI7 61 aa11.72□□□□□ -0.53
DDX39A-206ENST00000587730 PRB2P02812 416 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms